Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03545 ATGTATCCAAAGATTGAAGGTAGCACATACAGCAGGGGCATTATGATCATGTACCTGTGTGTCCATGTTGTTGCTGCTGCTGCTTCAAGTGAGAAGAGTGAAGCAAGTGCACTCTTAAAGTGGAAGGCCAGCCTTGAGAACACCAGTGTGTTGTCGTCGTGGGCAGGTACGAATCCATGCAAATGGCACGGCATTGCATGTGACAGAGCCAATTCCGTTACGGCAATAAATCTTGAAAATCATAATCTGAAAGGTACACTCCACACTCTCAGCTTCTTATCATTCCCCAACCTCCTCACCTTTAATATCTACAACAACTTCTTCTATGGAACCATACCACCACACATTGGTAACATATCCAAACTCAATACTTTGAACTTGTCTTTGAACGCTTTTGAGGGTACCATCCCTAAGGAGATGTGGACATTGACGAGTTTACGCGGGCTTGATCTTTCCCTGTGTATTTATCTTAGTGGAGTCATACCCAGTTCCATAGCAAATTTGACCAACCTATCATACCTAGATGTAGCCAAGAACAATCTTTCTGGCCACATTCCTCCTGAGATTGGAAATTTGAACAGCCTCAAGTATCTTGATCTGGCAGGTAATAAGCTTAGTGGTTCCATTCCCCACGAAATTGGAATGTTGACAAAGCTTGAGGTACTTGTTTTATCCACAAACATTCTCTTTGGAACTATCCCTTCTACCATTGGTAACCTTAGCAATCTGAATCACTTTTTTGTTTCAAATAACTCCCTCTCTGGCCCAATCCCATCCCTCATATGGAACATGTCTAACTTGTCCTGGCTATACCTTGATGGCAATCGACTATCTGGATCAATCCCTCCTTCCATAGAAAACTTGGCCAATTTGGAACGCTTTGTACTTCATGGAAACAATCTCTCTGGGTCCATTCCTTCCACTGTTGGAAACATGACTAAGCTCATCTACTTGTTCATGCGCGTCAATCATTTTTCTGGATCAATTCCTGTCTCCATAGGTAATTTGATCAACTTGAAAAAACTTAGTCTCCAAGAAAACAATTTCGTCGGATTTATTCCCAACACAATTGGAAACTTAAAGAAGCTCTCGCTGCTTGAATTGTCTTTCAACAATCTTAAAGGTAGCATTCCACCATCCACAAGAAACATGACCAACCTCATGATCTTTTTAGTATCTGAAAATAATTTAACTGGAAATTTGCCACCCCAAATCTGCTCAGGGGGATCACTAGAGTCATTTTGTGCTGATAATAATCACTTTACCGGTCCAGTACCAAGAAGCTTGAAGAATTGCTCTAGTATTCAAAGAATCAGGCTACAAGGTAACCAATTGGAAGGAGATATAGCACAAGATTTTGGCATATATCCAAAGTTGGGATTTATTGATCTAAGTGATAATAAATTTCATGGCCAAATTTCTCCTAACTGGGGGAGGTGCCCAAATCTTGATACCTTGATCATATCCAACAATAATATTTCCGGTAGTATACCCCCACAAATCGCAGAGGCTACTAAACTGGGTAAGCTTCAACTTTCTTCAAACCAATTGACTGGAAGGATACCAAAAGAACTAGGGAATTTGAAGAGCCTGCTTCATCTCGACATAGGCAACAATCAACTTGTAGGAAACATTCCAAAACAAGTTGTAGGGTTGCCTAATTTGTTGGAATTGAACTTGAGCAACAACAGACTAGATGGAAGCATCCCCTCTGAGTTTGATCCAATTCAACCTCTTTATTCTCTTGATCTTAGCGGGAATTCGTTGAATGGAACAATACCATCGGTGCTTGGACAGCTGAAGCAGTTGCAATTGTTGAACCTCTCACACAATAATCTCTCTGGCACAATTCCAAACACTTTTAGTAGCAGTATGTCAAGCTTGATTTCTGTCAACTTATCATACAACCAATTAAAAGGACCGGTTCCAAACGCTAGAGCTTTCCAAACAATTGAGTCACTGAAAAATAACAACGGGTTGTGTGGTAATGTCACTGGCTTGATGCCATGCCCAAGCAGCAGTGCTAGGCACAAAAGTCACACGGTCATGTTATTGGTATTACTTGTTATATTTGCAGTACTAGTGCTTTCTGTGGTGGCTGTTTCATTGTACTTTCTTTGTAAAAGTGCTAGAAACAAAAACAACTCAGCTAAAGAAGTGCAACAAGTAGAAGAACACTTTTCCATATGGAGCCATGACGGAAAAATGGCATTTGAAACTATCATTGATGCTACCAATAATTTTGATGACAAATATCTCATTGGAATTGGAGGGCAAGGATCCGTTTACAGGGCTGAGTTGCCTTCAGGTATGGTTGTTGCTGTGAAGAAGCTTCATAAGGAATCAGATGCAGGGAACAAGTCCAATTTGAAAGCATTTGAGAATGAAATCCAAGCACTGACAGAAATGAAGCACCGCAACATCATAAAGCTATACGGATATTGCCAGCATTCACGCTTCTCATTTTTGGTTTATGAGTTCTTGGAAGGTGGCAGTTTGGATCAAGCACTTGGCAGTGAAAAACAAGCAAGTGCATTTGATTGGGAGAGGAGGGTGAATGTGGTTAAAGGAGTTGCAAATGCTTTGTCATATATGCATCATGATTGCAAACCCCCCATAGTTCACCGTGACATATCAAGCAAGAACATTCTGTTGGACTCAGATTATTATGAAGCTCATGTCTCTGACTTTGGAACTGCTAAGTTTTTGAACCCAGATTCAAATTGGACAACACTTGCAGTCACCTATGGCTATGGAGCTCCAGCTTTGGAGTGCTTTGTTTGGAAATTCTTATGGGAAAGCATCCAGCGGACCTAA 2817 0.4089 MYPKIEGSTYSRGIMIMYLCVHVVAAAASSEKSEASALLKWKASLENTSVLSSWAGTNPCKWHGIACDRANSVTAINLENHNLKGTLHTLSFLSFPNLLTFNIYNNFFYGTIPPHIGNISKLNTLNLSLNAFEGTIPKEMWTLTSLRGLDLSLCIYLSGVIPSSIANLTNLSYLDVAKNNLSGHIPPEIGNLNSLKYLDLAGNKLSGSIPHEIGMLTKLEVLVLSTNILFGTIPSTIGNLSNLNHFFVSNNSLSGPIPSLIWNMSNLSWLYLDGNRLSGSIPPSIENLANLERFVLHGNNLSGSIPSTVGNMTKLIYLFMRVNHFSGSIPVSIGNLINLKKLSLQENNFVGFIPNTIGNLKKLSLLELSFNNLKGSIPPSTRNMTNLMIFLVSENNLTGNLPPQICSGGSLESFCADNNHFTGPVPRSLKNCSSIQRIRLQGNQLEGDIAQDFGIYPKLGFIDLSDNKFHGQISPNWGRCPNLDTLIISNNNISGSIPPQIAEATKLGKLQLSSNQLTGRIPKELGNLKSLLHLDIGNNQLVGNIPKQVVGLPNLLELNLSNNRLDGSIPSEFDPIQPLYSLDLSGNSLNGTIPSVLGQLKQLQLLNLSHNNLSGTIPNTFSSSMSSLISVNLSYNQLKGPVPNARAFQTIESLKNNNGLCGNVTGLMPCPSSSARHKSHTVMLLVLLVIFAVLVLSVVAVSLYFLCKSARNKNNSAKEVQQVEEHFSIWSHDGKMAFETIIDATNNFDDKYLIGIGGQGSVYRAELPSGMVVAVKKLHKESDAGNKSNLKAFENEIQALTEMKHRNIIKLYGYCQHSRFSFLVYEFLEGGSLDQALGSEKQASAFDWERRVNVVKGVANALSYMHHDCKPPIVHRDISSKNILLDSDYYEAHVSDFGTAKFLNPDSNWTTLAVTYGYGAPALECFVWKFLWESIQRT 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03545 938 Gene3D Ribonuclease Inhibitor 276 370 IPR032675 -
Arst4g03545 938 PRINTS Leucine-rich repeat signature 579 592 - -
Arst4g03545 938 PRINTS Leucine-rich repeat signature 600 613 - -
Arst4g03545 938 FunFam Leucine-rich repeat receptor protein kinase MSP1 710 827 - -
Arst4g03545 938 Gene3D Transferase(Phosphotransferase) domain 1 828 927 - -
Arst4g03545 938 Pfam Protein kinase domain 750 921 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03545 938 Gene3D Ribonuclease Inhibitor 186 275 IPR032675 -
Arst4g03545 938 SUPERFAMILY RNI-like 366 644 - -
Arst4g03545 938 PANTHER LEUCINE RICH REPEAT KINASE 2 333 922 - -
Arst4g03545 938 FunFam Nuclear pore complex protein NUP107 31 185 - -
Arst4g03545 938 FunFam Predicted protein 186 281 - -
Arst4g03545 938 Pfam Leucine rich repeat N-terminal domain 32 68 IPR013210 -
Arst4g03545 938 Gene3D Phosphorylase Kinase; domain 1 707 827 - -
Arst4g03545 938 SUPERFAMILY Protein kinase-like (PK-like) 728 922 IPR011009 -
Arst4g03545 938 ProSiteProfiles Leucine-rich repeat profile. 194 216 IPR001611 GO:0005515
Arst4g03545 938 SUPERFAMILY RNI-like 76 398 - -
Arst4g03545 938 SMART LRR_typ_2 528 551 IPR003591 -
Arst4g03545 938 SMART LRR_typ_2 360 383 IPR003591 -
Arst4g03545 938 SMART LRR_typ_2 168 191 IPR003591 -
Arst4g03545 938 SMART LRR_typ_2 264 287 IPR003591 -
Arst4g03545 938 SMART LRR_typ_2 552 575 IPR003591 -
Arst4g03545 938 SMART LRR_typ_2 336 359 IPR003591 -
Arst4g03545 938 SMART LRR_typ_2 384 408 IPR003591 -
Arst4g03545 938 SMART LRR_typ_2 600 623 IPR003591 -
Arst4g03545 938 SMART LRR_typ_2 288 312 IPR003591 -
Arst4g03545 938 SMART LRR_typ_2 192 216 IPR003591 -
Arst4g03545 938 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 380 674 - -
Arst4g03545 938 Gene3D Ribonuclease Inhibitor 371 672 IPR032675 -
Arst4g03545 938 ProSitePatterns Tyrosine protein kinases specific active-site signature. 873 885 IPR008266 GO:0004672|GO:0006468
Arst4g03545 938 ProSiteProfiles Protein kinase domain profile. 748 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03545 938 Pfam Leucine rich repeat 218 277 IPR001611 GO:0005515
Arst4g03545 938 Pfam Leucine rich repeat 579 638 IPR001611 GO:0005515
Arst4g03545 938 Pfam Leucine rich repeat 157 205 IPR001611 GO:0005515
Arst4g03545 938 Pfam Leucine rich repeat 506 565 IPR001611 GO:0005515
Arst4g03545 938 FunFam Probable leucine-rich repeat receptor-like protein kinase At5g63930 282 379 - -
Arst4g03545 938 Gene3D Ribonuclease Inhibitor 31 185 IPR032675 -
Arst4g03545 938 SMART LRR_sd22_2 264 290 - -
Arst4g03545 938 SMART LRR_sd22_2 216 242 - -
Arst4g03545 938 SMART LRR_sd22_2 528 554 - -
Arst4g03545 938 SMART LRR_sd22_2 360 381 - -
Arst4g03545 938 SMART LRR_sd22_2 168 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03545 Arst-Chr4 113843671 113846804 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03545 14 922 Receptor kinase-like Gene Family AT4G08850 42.812 0.0 716
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Arst4g03545 Pkinase 1.4e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03545 - - aip:107635237 1674.45