Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03542 ATGTGTGGAAAAATTCAAGCTACTGTCAAGAAACCACTCCTTAATAGGTTTAGGGATCATATAGTTGAAGGACAAGTTTATAGAATGGCATATTTTAGTGTTGTGTCAAATCATGGTAGTTATAGAGCAACTTCCCATGAATTCAAATTGGTTTTCCTTCACCGAACCACTGTTGTAGCTGTTGATGAAGATGTTATCCCTAAGACTTGTTTCAACATGTTTCCTTTTTCTGAGCTGCTGAACATGACCCAAGATTATGATTTTTTAGTTGATGTCATTGGACTTTTAACTTCAGTTGGAGAAGAGAAAGAATATGCAAGAGAGGGAAAAATTGTGAAAATGATTGCATTGGAATTAACTTCAAAAGATCTTACAGTGAGATGTGCATTGTTTGGGGATTATGTTAATCAAGTAAATCATTTCCTTGCCTCTGGGTATGTGGAGCAGCCTGTTGTAGTTATTCAACTTGCAAAAGTCAAGTTCTTTCGGGGTCAAGTAGGTCTTCAAAATGTGATGTATGCCACTCAAATGTTATTTAATCTTGATATTCCTGAAGTTGTTGAATTTAGGCAGAGGAATCTGGAGTAA 588 0.3588 MCGKIQATVKKPLLNRFRDHIVEGQVYRMAYFSVVSNHGSYRATSHEFKLVFLHRTTVVAVDEDVIPKTCFNMFPFSELLNMTQDYDFLVDVIGLLTSVGEEKEYAREGKIVKMIALELTSKDLTVRCALFGDYVNQVNHFLASGYVEQPVVVIQLAKVKFFRGQVGLQNVMYATQMLFNLDIPEVVEFRQRNLE 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03542 195 SUPERFAMILY Nucleic acid-binding proteins 3 63 IPR012340 -
Arst4g03542 195 CDD RPA1_DBD_B_like 91 192 - -
Arst4g03542 195 CDD RPA1_DBD_A_like 4 58 - -
Arst4g03542 195 Gene3D - 2 63 IPR012340 -
Arst4g03542 195 Gene3D - 65 195 IPR012340 -
Arst4g03542 195 Pfam Domain of unknown function DUF223 4 86 IPR003871 -
Arst4g03542 195 SUPERFAMILY Nucleic acid-binding proteins 71 191 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03542 Arst-Chr4 113794580 113796531 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03542 3 190 Core DNA Replication Machinery Family AT2G06510 29.648 1.80e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03542 - - adu:127746704 389.423