Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03500 ATGGGTGTGGCTCAAAACATTCCTGACATGGAGGAGGAGGGAACATTGGAGATTGGAATGGAATACAGAACTGTGTCTGGTGTTGCTGGACCGTTGGTTATTCTTGATAAAGTTAAGGGACCAAAATTTCAAGAGATTGTTAATATTCGGTTAGGGGATGGAACTTCTCGGCGTGGACAAGTTCTAGAAGTTGATGGTGAGAAAGCTGTTGTTCAGGTCTTCGAAGGTACCTCTGGGATTGACAATAAGTTTACAACTGTGCAATTTACTGGAGAGGTATTGAAAACTCCTGTTTCGCTCGACATGCTTGGCCGCATATTTAATGGCTCGGGAAAACCCATTGATAATGGTCCACCCATATTACCAGAGGCTTACTTGGACATATCAGGAAGTTCCATCAATCCTAGTGAGAGAACCTATCCAGAGGAGATGATACAAACCGGAATTTCTACAATTGATGTCATGAATTCTATTGCTAGAGGTCAAAAGATCCCGCTATTCTCAGCTGCTGGTCTCCCCCATAATGAAATTGCTGCACAGATATGTCGTCAGGCTGGCTTAGTCAAGCGATTAGAGAAATCTGATAATCTTCTTGAGGGTGGAGAAGACGACAATTTTGCCATTGTGTTTGCTGCTATGGGAGTTAACATGGAGACTGCACAGTTTTTCAAACGTGACTTTGAAGAGAATGGCTCATAGTAATTCTGAAAAAAGTTATTGTGCTTTTTTCATGCCAATGATCCTACAATTGAGCGTATCATCACCCCTCGTATTGCTCTTACTACTGCTGAATATCTGGCTTATGAATGTGGCAAGCATGTTCTTGTGATACTCACAGATATGAGTTCATATGCCGATGCTCTTCGTGAGGTATCTGCTGCCCGAGAAGAAGTGCCAGGACGACGTGGCTATCCCGGTTACATGTACACAGATCTTGCAACAATATACGAACGTGCTGGAAGAATCGAGGGGCGAAAAGGCTCTATTACTCAGATTCCTATTCTAACTATGCCAAATGATGATATCACGCATCCAACTCCCGATCTTACAGGATATATTACCGAGGGACAGATATATATTGACAGACAGCTGCATAACAGGCAGATATATCCACCAATCAATGTTCTTCCATCACTGTCTCGATTGATGAAGAGTGCCATCGGCGAGGGAATGACTCGAAAGGATCATTCTGATGTATCCAACCAGCTCTATGCAAATTATGCCATAGGAAAGGATGTTCAGGCAATGAAAGCTGTGGTTGGAGAAGAAGCACTTTCATCTGAGGACTTGCTATATCTGGAATTTCTGGACAAATTCGAGCGAAAGTTTGTGACGCAAGGAGCTTATGACACCCGCAACATCTTCCAGTCACTAGATCTTGCGTGGACCTTGCTTCGGATCTTTCCCCGGGAGCTTCTTCACCGTATACCGGCCAAGACCCTCGACCAGTTCTACAGCCGAGATTCCGGTAACTGA 1476 0.4404 MGVAQNIPDMEEEGTLEIGMEYRTVSGVAGPLVILDKVKGPKFQEIVNIRLGDGTSRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKSDNLLEGGEDDNFAIVFAAMGVNMETAQFFKRDFEENGSXXFXKKLLCFFHANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVTQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQFYSRDSGN 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03500 491 PANTHER V-TYPE PROTON ATPASE SUBUNIT B 9 489 IPR022879 -
Arst4g03500 491 Pfam ATP synthase alpha/beta family, beta-barrel domain 25 91 IPR004100 GO:0046034|GO:1902600
Arst4g03500 491 PIRSF V-ATPsynth_beta/V-ATPase_B 12 491 IPR022879 -
Arst4g03500 491 CDD V_A-ATPase_B 93 388 - -
Arst4g03500 491 CDD ATP-synt_V_A-type_beta_N 21 92 - -
Arst4g03500 491 Hamap V-type ATP synthase beta chain [atpB]. 19 489 IPR022879 -
Arst4g03500 491 CDD ATP-synt_V_A-type_beta_C 390 484 - -
Arst4g03500 491 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 148 380 IPR000194 GO:0005524
Arst4g03500 491 NCBIfam V-type ATPase subunit B 21 489 IPR005723 GO:0033180|GO:0046961|GO:1902600
Arst4g03500 491 FunFam V-type proton ATPase subunit B, brain 30 491 - -
Arst4g03500 491 Gene3D - 30 490 - -
Arst4g03500 491 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 95 386 IPR027417 -
Arst4g03500 491 ProSitePatterns ATP synthase alpha and beta subunits signature. 371 380 IPR020003 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03500 Arst-Chr4 113423412 113428079 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03500 1 491 Primary Pumps ATPases(2) AT4G38510 94.106 0.0 942
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03500 K02147 - gmx:100791429 922.924