Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03499 ATGGCCGGCATAGACTTGGGTTCAGCATCACACTTTGTTCATCACCTTCAACGCCCTGACCTTGAAGATGATGATAATAACCAAGACCAAGACCCGAGCAACAACCATCACGAGGGTCTTGACCTAGTTTCGCCAAATCAAGGCCCTGGTGATGTTGTTGCTCGTAGGCCAAGAGGGAGACCTCCGGGTTCCAAGAACAAGCCTAAGCCACCGGTGATCATCACAAGGGAGAGTGCAAACACTCTTAGGGCACACATCCTTGAAGTTAGTAGTGGTTGCGATGTGTTTGACTCTGTGGCCACTTATGCAAGAAAGCGTCAACGGGGAATCTGTGTTCTTAGCGGCAGCGGAACTGTTACCAACGTCACGCTCCGACAACCAGCAGCTGCCGGAGCAGTCGTGACGCTTCATGGAAGATTTGAGATACTTTCTCTATCAGGATCCTTTCTACCACCTCCTGCTCCACCAGGGGCTACAAGTTTAACTGTGTTTCTTGGTGGAGGCCAGGGACAAGTGGTAGGAGGAAATGTTATTGGGCTTTTAGTGGCTTCTGGGCCTGTTATTGTTATTGCCTCGTCGTTTACTAATGTAGCGTATGAAAGGTTGCCCTTAGATGAAGACGAGGCTCTTCAGATAGAACAAGGGCAACCTTCTGGTGGCGGTGGCGGTGTCAGTGGCAGTGGTGTTAATAACTCTTTTCCGGATCCTTCTTCGGGGTTACCGTTCTTCAATCTACCTCTAAACATGCCTAATTTGGCCGTTGATGGTTGGGCCGGTGGGAACTCTAGTGGTGGAAGACAATCTTTTTGA 810 0.4975 MAGIDLGSASHFVHHLQRPDLEDDDNNQDQDPSNNHHEGLDLVSPNQGPGDVVARRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVSSGCDVFDSVATYARKRQRGICVLSGSGTVTNVTLRQPAAAGAVVTLHGRFEILSLSGSFLPPPAPPGATSLTVFLGGGQGQVVGGNVIGLLVASGPVIVIASSFTNVAYERLPLDEDEALQIEQGQPSGGGGGVSGSGVNNSFPDPSSGLPFFNLPLNMPNLAVDGWAGGNSSGGRQSF 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03499 269 CDD DUF296 83 192 IPR005175 -
Arst4g03499 269 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 27 217 IPR014476 GO:0003680
Arst4g03499 269 SUPERFAMILY AF0104/ALDC/Ptd012-like 79 210 - -
Arst4g03499 269 MobiDBLite consensus disorder prediction 15 36 - -
Arst4g03499 269 MobiDBLite consensus disorder prediction 15 73 - -
Arst4g03499 269 FunFam AT-hook motif nuclear-localized protein 82 209 - -
Arst4g03499 269 Pfam Plants and Prokaryotes Conserved (PCC) domain 83 196 IPR005175 -
Arst4g03499 269 ProSiteProfiles PPC domain profile profile. 79 218 IPR005175 -
Arst4g03499 269 Gene3D - 82 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03499 Arst-Chr4 113414759 113416061 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03499 1 269 AT-hook Motif Nuclear Localized (AHL) Family AT2G35270 56.169 5.89e-97 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03499 - - gmx:100803960 401.364