Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03475 ATGGTTTCGAGTAGCCGAATTTTTGGGGGCCGTGGTTGTGTTGTTGTTCTAGCTGTTTGTTTCTTGCTGCTTATTTGTTGTGGCAAGATACATGGAACTGTTACTGATATCTTCTGCTTGAAGAGTGTTAAAGCTTCACTGCGTGACCCGGATAACTATTTACAGTCATGGGATTTCAACAACAACACAGAAGGGTTTATCTGCAGGTTCACCGGGGTTGACTGTTGGCATCCTGATGAGAACAGAGTCTTGAATATCAAGTTATCGAACATGGGACTGAAAGGGTCATTCCCTCGAGGCCTTGTGAATTGCTCGAGCTTAACAGGGCTAGATCTTTCGAACAACAGGCTTTCTCAGCCCCTTCCGGAGGATATATCTACTGTTATTAAGTGGGTGACAAAACTTGATCTGTCGTCGAATGATTTTGATGGCGAGATACCTGCTTTGCTTGCGAATTGTAGCTTCCTTAATGACCTCAAACTTGACCACAACAGGCTCACCGGTCAAATTCCCTCGCAAATAGGTCAGCTTCCGAGGCTTAAGACATTTAGTGTGTCCAATAATCTTTTGACTGGGCAAGTTCCGGGGTTTAAGAAAGGTGTAGTGACGGCCGAGAGCTTTGCGAATAATCCAGGCCTCTGTGGCCCTCCTTTGGATCTTTGCCAGAGTAACCTTTCCAACGGCAACACTGCTGTTATAGCTGGAGCAGCCGTTGGTGGCGTGAGTTTTGCTGCATTGGTGGTTGGTGTTGCAATGTTCTTCTATGTGCGCCGTGTTTCTACCAGGAAGAAGGAAGAGGACCCTGAAGGAAACAAATGGGCAAAGAGTATAAAGGGTACCAAACAAATAAAGGTTTCTATGTTTGAGAAGACACTTACAAAAGTTAAATTGAGTGATCTCATGAAGGCTACAAATGACTTCAGCAAAAGCAACATTATTGGGTCCGGAAGAACTGGAACCATTTACAAAGCTGTTCTTGATGATGGCACATCACTCATGGTGAAGAGATTGCAACAATCTCAACACTCAGAGAAAGAATTTAAATCTGAGATGGCTACGCTAGGGGCAGTCCAGCACCGGAACTTGGTTCCCCTCTTAGGCTTTTGTTCTGCCAAAAAGGAGAGGCTTTTGGTCTATAAAAATATGCCAAATGGCACCCTCCATGATCAATTACATCATCGAGCCGATGAGAGCACCATGGAGTGGTCTTTAAGGCTCAAAATTGCAATCGGAGCAGCCAAAGGATTAGCATGGCTTCATCACAACTGCAATCCCCGGATCATACACCGAAACATAAGCTCTAAGTGCATCTTGTTGGATGCAGATTTTGAGCCGAAAATTTCCGATTTTGGCCTGGCTAGACTGATGAACCCCATCGACACGCATTTGAGTACTTTTGTGAATGGTGAGTTTGGGGATTTAGGCTATGTTGCTCCTGAGTACACAAGAACTTTGGTAGCCACGCCTAAGGGTGATGTTTATAGCTTTGGTGTTGTACTTCTTGAGTTGGTAACAGGCGAAAAACCTACTCACGTGGCGAAAGCTCCGGAAACTTTCAAAGGAAGCTTGGTAGAATGGATTCAGCAGCTCTCAAGTAACTCACAACTGCATGATGCCATTGACAAATCCCTAACCGGGAAGGGAGCCGATGATGAGCTTTTCCAGTTCCTAAAGGTTGCATGCAACTGTGTTGTAGCAACCTCAAAGGAGAGGCCAACTTTGTTTGAAGTTTACCAGTTTCTAAGAGCCATTGGAAGTAAATATAATTTTACAACAGAGGATGAAATTTTGGTACCTACTGATACTGGTTATGCTGATAACTTAGAGGAGCTTATTGTGGCTAAAGAGGGAGGAAAGGATTGA 1863 0.4439 MVSSSRIFGGRGCVVVLAVCFLLLICCGKIHGTVTDIFCLKSVKASLRDPDNYLQSWDFNNNTEGFICRFTGVDCWHPDENRVLNIKLSNMGLKGSFPRGLVNCSSLTGLDLSNNRLSQPLPEDISTVIKWVTKLDLSSNDFDGEIPALLANCSFLNDLKLDHNRLTGQIPSQIGQLPRLKTFSVSNNLLTGQVPGFKKGVVTAESFANNPGLCGPPLDLCQSNLSNGNTAVIAGAAVGGVSFAALVVGVAMFFYVRRVSTRKKEEDPEGNKWAKSIKGTKQIKVSMFEKTLTKVKLSDLMKATNDFSKSNIIGSGRTGTIYKAVLDDGTSLMVKRLQQSQHSEKEFKSEMATLGAVQHRNLVPLLGFCSAKKERLLVYKNMPNGTLHDQLHHRADESTMEWSLRLKIAIGAAKGLAWLHHNCNPRIIHRNISSKCILLDADFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYTRTLVATPKGDVYSFGVVLLELVTGEKPTHVAKAPETFKGSLVEWIQQLSSNSQLHDAIDKSLTGKGADDELFQFLKVACNCVVATSKERPTLFEVYQFLRAIGSKYNFTTEDEILVPTDTGYADNLEELIVAKEGGKD 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03475 620 Gene3D Phosphorylase Kinase; domain 1 268 380 - -
Arst4g03475 620 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 85 583 - -
Arst4g03475 620 Pfam Protein tyrosine and serine/threonine kinase 310 580 IPR001245 GO:0004672|GO:0006468
Arst4g03475 620 CDD STKc_IRAK 313 581 - -
Arst4g03475 620 Pfam Leucine rich repeat N-terminal domain 36 76 IPR013210 -
Arst4g03475 620 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 268 381 - -
Arst4g03475 620 ProSiteProfiles Protein kinase domain profile. 307 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03475 620 Gene3D Transferase(Phosphotransferase) domain 1 382 600 - -
Arst4g03475 620 SUPERFAMILY Protein kinase-like (PK-like) 285 581 IPR011009 -
Arst4g03475 620 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 382 601 - -
Arst4g03475 620 FunFam Nuclear pore complex protein NUP107 34 196 - -
Arst4g03475 620 SUPERFAMILY L domain-like 35 200 - -
Arst4g03475 620 Gene3D Ribonuclease Inhibitor 35 222 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03475 Arst-Chr4 112918981 112922053 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03475 16 595 Receptor kinase-like Gene Family AT3G28450 46.678 0.0 534
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Arst4g03475 PK_Tyr_Ser-Thr 3.1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03475 - - gmx:100817267 928.317