Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03472 ATGGAGAATTTATTCAAGAGTTGGATTTCTCGACATCTGGGAATGGAAGAAGAAGAAGAAGAAAATGATGATACGATCATCATGAACAACTACTCATTGAATGAAGAGCAAGAGTTCCTAATGAAAATCTTTAATGGCCGACCAGATTTCTCATCACCAGAAAGTAGCGAACATTATTATTATTCTTCCCCCAATAATAATAACAATAATAGTTATAATAATAATGATCCTAATAATTGTGACACAAGCCCCAATAACAATAACAGTAGTGTATCATTTGAAGACACAAGAGTGCAAAAAAGTAAAAGCTCCAATTCTAGTTCTTCTACCTATCTATTATCATTTGAGCCTAATTCATTTAAAGGAAGAAGTAGAGGTGATGATGGGTTTGAATTATTTGAAGCAAGTATGAATAAAAATGATGAAGGTGGAACAACAAAAAAGCGCAAAGGAAAGACAGTAGATCACATAATAGCTGAGAGGAAAAGGAGGCAAGACCTAACAAGAAGCATCATCCAACTTTCAGCCACTATACCTGGCTTGAAGAAGATGGACAAGGCTCACGTAATTCGTGAATCTCTAAGTTACATAAAAATTCTTCAAGATCGAGTGAAAGAGTTGGAGAACCAAATCAAAGATAGAAGAGTAGATTCAGCAATATTCATAGGAAGATCACAAGACTCATTATCAACAGATAAAAGCACAATCAGCTGTGAAATAACATCAGATAACAACAATGGTGGTGGTGGTTTCAATGAATCATCACTTGAGATTGAAGCAAAAGTCATGGAAAAAGAAGTTCTCATTAGAATCCAATGTGAGAAGCAAAAAAACAACATAATAATGCTCAAAATACATGCCTTTCTTGACAAGCTTCATCTCTCTATAGCAAGTAACAGTGTGATACCATTTGGGACTTCTACTCTCGTAATAATTACCATTGTTGCTGAGTATTAG 957 0.3459 MENLFKSWISRHLGMEEEEEENDDTIIMNNYSLNEEQEFLMKIFNGRPDFSSPESSEHYYYSSPNNNNNNSYNNNDPNNCDTSPNNNNSSVSFEDTRVQKSKSSNSSSSTYLLSFEPNSFKGRSRGDDGFELFEASMNKNDEGGTTKKRKGKTVDHIIAERKRRQDLTRSIIQLSATIPGLKKMDKAHVIRESLSYIKILQDRVKELENQIKDRRVDSAIFIGRSQDSLSTDKSTISCEITSDNNNGGGGFNESSLEIEAKVMEKEVLIRIQCEKQKNNIIMLKIHAFLDKLHLSIASNSVIPFGTSTLVIITIVAEY 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03472 318 Pfam Helix-loop-helix DNA-binding domain 155 201 IPR011598 GO:0046983
Arst4g03472 318 MobiDBLite consensus disorder prediction 53 117 - -
Arst4g03472 318 Coils Coil 190 217 - -
Arst4g03472 318 Gene3D - 141 216 IPR036638 GO:0046983
Arst4g03472 318 PANTHER BHLH TRANSCRIPTION FACTOR 49 317 - -
Arst4g03472 318 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 150 215 IPR036638 GO:0046983
Arst4g03472 318 SMART finulus 157 206 IPR011598 GO:0046983
Arst4g03472 318 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 151 200 IPR011598 GO:0046983
Arst4g03472 318 MobiDBLite consensus disorder prediction 53 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03472 Arst-Chr4 112860981 112863848 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03472 155 317 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 45.181 1.34e-34 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst4g03472 HLH 2.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03472 - - aip:107638103 480.33