Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03407 ATGAGCTCGAAGGAGAGACCCACTCTTGGTGGCACGCGGATTAAGACCCGCAAACGGAATATTGCAGCGCCGCTGGACCCTGCAGCATTCGCGGATGCAGTGGTCCAGATTTATTTGGATAATGCTGGTGATCTGGAACTTGTTGCTAAGAACATTGAATCTTCAGACCTTAACTTCTCAAGATACGGTGACACCTTTTTTGAGGTTGTTTTCACTGGGGGTCGTACACAACCTGGAACTACCAAGCCTGATGAGGGGGAGCGCCATCCATACTCTATAATAGAGTGTGAGCCAAAGCGTGAAGTCATCTTACCATCTGTAATCTACATACAAAAGATTTTGAGGCGAAGGCCATTCCTCATTAAGAACCTCGAAAATGTTATGCAAAAGTTCCTCCAGTCCTTGGAGCTTTTCGAGGAAAATGAGAGGAAAAAGCTGGCAATCTTCACAGCACTTGCATTCTCCCAGAAGCTCTCTGGTCTTCCACCAGAGACCGTGTTCCAACCACTTCTTAAGGATAACCTTGTGGCCAAAGGGCTAGTTCTGTCATTCATAACCGACTTCTTTAAGGAGTATCTGATTGACAACAGCCTTGATGATCTTATTTCAATTCTGAAAAGAGGAAAAGTAGAGGATAAGCTCTTGGAGTTTTTCCCTCCTACAAAAAGATCCAACGAGTCTTTCTCTGAGCATTTCAGCAAGGAAGGACTAGTGGCATTGGTCGAGTACAATGAGAAGAAAATATTTGAGGTGAAACTTAAGGAAATGAAGTCTGCTTTGACAACTCAGATAACGGAGGAGGTTGATATATCTGAAGTAATTGAGAATGTGAAGGTGCGGGTCCGAGATGCTAAATTGCCAGATATTGAGGTTGTCCGGGTCTTGTGGGATGTTTTGATGGATGCTGTCCAGTGGTCAGGGAAAAATCAGCAACAGAATGCAAATTCAGCCCTACGCCAGGTAAAAACCTGGGCAGAACTGTTGAACACATTCTGCACCACTGGGAAACTGGAGCTAGAACTGATGTACAAGGTACAAATGCAATGCTACGAAGATGCAAAACTGATGAAGCTGTTCCCAGAGATTATTAGATCGCTCTACGAGCAGGATGTGCTGGCTGAAGACACCATCCTTCATTGGTTCCGCAAAGGAACAAACACGAAGGGCAGGCAAACCTTTGTGAAAGCATTGGAATCCTTTGTGAATTGGCTGGAGGAGGCAGAAGAGGAGGAATAA 1236 0.4498 MSSKERPTLGGTRIKTRKRNIAAPLDPAAFADAVVQIYLDNAGDLELVAKNIESSDLNFSRYGDTFFEVVFTGGRTQPGTTKPDEGERHPYSIIECEPKREVILPSVIYIQKILRRRPFLIKNLENVMQKFLQSLELFEENERKKLAIFTALAFSQKLSGLPPETVFQPLLKDNLVAKGLVLSFITDFFKEYLIDNSLDDLISILKRGKVEDKLLEFFPPTKRSNESFSEHFSKEGLVALVEYNEKKIFEVKLKEMKSALTTQITEEVDISEVIENVKVRVRDAKLPDIEVVRVLWDVLMDAVQWSGKNQQQNANSALRQVKTWAELLNTFCTTGKLELELMYKVQMQCYEDAKLMKLFPEIIRSLYEQDVLAEDTILHWFRKGTNTKGRQTFVKALESFVNWLEEAEEEE 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03407 411 Coils Coil 121 141 - -
Arst4g03407 411 Coils Coil 400 411 - -
Arst4g03407 411 ProSiteProfiles W2 domain profile. 246 411 IPR003307 GO:0005515
Arst4g03407 411 FunFam ARM repeat superfamily protein 243 411 - -
Arst4g03407 411 PANTHER BASIC LEUCINE ZIPPER AND W2 DOMAIN-CONTAINING PROTEIN 2 411 - -
Arst4g03407 411 Gene3D - 243 411 - -
Arst4g03407 411 SMART 542_3 325 410 IPR003307 GO:0005515
Arst4g03407 411 SUPERFAMILY ARM repeat 252 408 IPR016024 -
Arst4g03407 411 CDD W2_eIF5C_like 216 405 IPR043510 -
Arst4g03407 411 Pfam eIF4-gamma/eIF5/eIF2-epsilon 338 411 IPR003307 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03407 Arst-Chr4 112038144 112041895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03407 300 407 Eukaryotic Initiation Factors Gene Family AT2G34970 31.818 3.85e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03407 - - gmx:100782537 767.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g03407 4 112038144 112041895 Arst4g03407 4 112038144 112041895 ECH