Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03363 ATGGCTTCAATGAACTTGCTGGGTTTCTCTCTCTCCCCTCAAGAACACACTACTACTACTCATCATCATCATCAAACTCGTTTTGGGCTATTCAATCCCACTGCACAAGATGATGTAACTGCTGCTGATGATGGAAACTGCTTCGATCTCACTCCTTCCACTCATGCCGCTACTACTCTCAACCTCCCTCCTTTTCCCATCTATCAAGAACCCTTCAACAATCATCATCATCTTTCTACTCATCAAGATTGGAAGGAGAATAACTACATCAACCAAAACCTGCTATTAGAAACTTCATGCAACAACAATAACAATGTCGACAACAACCACCACCACCATCACCAACAACCCAAGCTCGAGAACTTCCTCGGTGGACACTCCTTCGCCGATCATCATCACGATTACGGTGCCAACTCATCAGGAGACTACCTCTTCCAAAACTGCTCTCACCCGGAAGTTACAGCAGGAGGAGGAGAAGGCTCCGCCGGCGGCGGCGGTGGAAGCACAAACTCAATAGGGTTGTCAATGATAAAAACATGGCTAAGGAACCAACCACTTCATCATCATCACTCATCAGAAAACAAAGAAACCATGATTGCATCTTCAAATAATACTACTGCACCAACAACTCAAACCTTGTCGCTTTCTATGAGTACTGGCTCACAATCTCTCCCGCTATTACCACCTACTAATAATAATAATGTTAGTGTTGCCGTAGCAGGAGGGTCTTCATCAACGGGAGCAGTTGAAAATGGAAGCATTGTTGAGAATAACAATGTGACCAAAAAATCCATTGACACTTTTGGACAAAGAACTTCCATTTACCGTGGTGTAACAAGGCATAGGTGGACAGGGAGATATGAAGCTCATTTGTGGGATAATAGTTGTAGAAGAGAGGGACAGACTCGCAAAGGGAGGCAAGTATTTGCAGGAGGTTATGATAAAGAGGAAAAAGCAGCTAGAGCCTATGATTTAGCAGCCCTAAAATACTGGGGAACCACAACAACAACAAATTTTCCGATTAGTCAATATGAAAAAGAATTAGAAGAAATGAAGCACATGACAAGACAAGAGTACGTTGCGTCATTGAGAAGGAAGAGTAGTGGATTTTCTCGTGGTGCATCCATTTATCGTGGAGTAACAAGGCATCATCAGCATGGTAGATGGCAAGCTCGGATTGGAAGAGTTGCAGGCAACAAAGATCTTTATCTAGGAACTTTTAGCACTCAGGAAGAGGCAGCAGAAGCATATGACATAGCAGCCATAAAGTTCCGAGGTTTGAATGCAGTTACAAACTTTGACATGAACAGATACGATGTGAAGAGCATACTAGAGAGCAGCACCTTGCCCATTGGTGGCGCCGCCAAGAGGTTGAAGGACATGGACAATGGAGACCTAATTAATGTAGACAATAGTGTTCACCAAAGACAACACCAAGAAGATCACAGCAACAACATCAATTCTCATTCTCTAACTGATGGAATCAACAACTTTGTAACTGCGGCGGCTGCCACCCATCATGGTGGTTGGCCTGCTTCCCTTGCATTCCAACACTACCCTGCTAACTATGGATCTTCATCATCATCATCACAAAGGTTCTGGTGCAAGCAAGAGCAAGATTCTTCTGATCAAAACAATGTGTCTCACAATTTTCATCAAGAAATTCATCCTTTGCAACTAGGGGGTAGTACCCACAATTTCTTTCAGCATGGTATCATGACATTGGATCATTCTGCTTCCATGGATAACAATAACAGCTCTGGATCAAGTTCTGTGGTTTATGGTGGGGGTGGTGGGGGTGGTGGTGGTGGTGATGTCAACGGTTATGTGTTTCAAATGGGTGCTGTTATTGGCAATGATAACAATGAAATCAAGGGACTTGGCTATGAAAGTGTTTTTGGCAGTGAGGCATATAATCAGACACATGGAAGGCATCTGTATTATCAGCAACAATCATCAACAATGGATCATAACAATAATGGAGCTGTAGTAGTTAAGGGTAGCCCATATGATCATCATCATCATCATGGTGGTGGTTCCAACAATTGGGTTCCAACTGCAATACCCACTCTTGCAGCATCAAGGGGTCTCTGCCATGGGGCTCCACCATTCACATTATTGCATGAATGA 2130 0.4352 MASMNLLGFSLSPQEHTTTTHHHHQTRFGLFNPTAQDDVTAADDGNCFDLTPSTHAATTLNLPPFPIYQEPFNNHHHLSTHQDWKENNYINQNLLLETSCNNNNNVDNNHHHHHQQPKLENFLGGHSFADHHHDYGANSSGDYLFQNCSHPEVTAGGGEGSAGGGGGSTNSIGLSMIKTWLRNQPLHHHHSSENKETMIASSNNTTAPTTQTLSLSMSTGSQSLPLLPPTNNNNVSVAVAGGSSSTGAVENGSIVENNNVTKKSIDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQVFAGGYDKEEKAARAYDLAALKYWGTTTTTNFPISQYEKELEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMNRYDVKSILESSTLPIGGAAKRLKDMDNGDLINVDNSVHQRQHQEDHSNNINSHSLTDGINNFVTAAAATHHGGWPASLAFQHYPANYGSSSSSSQRFWCKQEQDSSDQNNVSHNFHQEIHPLQLGGSTHNFFQHGIMTLDHSASMDNNNSSGSSSVVYGGGGGGGGGGDVNGYVFQMGAVIGNDNNEIKGLGYESVFGSEAYNQTHGRHLYYQQQSSTMDHNNNGAVVVKGSPYDHHHHHGGGSNNWVPTAIPTLAASRGLCHGAPPFTLLHE 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03363 709 FunFam AP2-like ethylene-responsive transcription factor 375 436 - -
Arst4g03363 709 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 109 538 - -
Arst4g03363 709 CDD AP2 273 342 IPR001471 GO:0003700|GO:0006355
Arst4g03363 709 Pfam AP2 domain 274 332 IPR001471 GO:0003700|GO:0006355
Arst4g03363 709 Pfam AP2 domain 376 426 IPR001471 GO:0003700|GO:0006355
Arst4g03363 709 SMART rav1_2 376 440 IPR001471 GO:0003700|GO:0006355
Arst4g03363 709 SMART rav1_2 274 346 IPR001471 GO:0003700|GO:0006355
Arst4g03363 709 SUPERFAMILY DNA-binding domain 273 342 IPR016177 GO:0003677
Arst4g03363 709 SUPERFAMILY DNA-binding domain 375 435 IPR016177 GO:0003677
Arst4g03363 709 PRINTS Ethylene responsive element binding protein signature 275 286 IPR001471 GO:0003700|GO:0006355
Arst4g03363 709 PRINTS Ethylene responsive element binding protein signature 416 436 IPR001471 GO:0003700|GO:0006355
Arst4g03363 709 ProSiteProfiles AP2/ERF domain profile. 376 434 IPR001471 GO:0003700|GO:0006355
Arst4g03363 709 FunFam AP2-like ethylene-responsive transcription factor ANT 273 342 - -
Arst4g03363 709 CDD AP2 375 434 IPR001471 GO:0003700|GO:0006355
Arst4g03363 709 Gene3D AP2/ERF domain 274 342 IPR036955 GO:0003700|GO:0006355
Arst4g03363 709 Gene3D AP2/ERF domain 376 436 IPR036955 GO:0003700|GO:0006355
Arst4g03363 709 ProSiteProfiles AP2/ERF domain profile. 274 340 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03363 Arst-Chr4 111628058 111632395 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03363 171 540 AP2-EREBP Transcription Factor Family AT5G17430 59.151 2.19e-134 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Arst4g03363 AP2 2e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03363 K09285 - gmx:100797584 694.501