Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03332 ATGTCCATGTCTTCAACCTCATCATTCCTCAACCACCTTGGCCTTGGCTACTCCATAGCCATAGCCCTTGCTTTCCTCGTTCTCCTCTCCACCCTCATCTTATCTTCTTACCTCTGCTGTAACCGCAACCGTCGCAATAATATTAACAACCCCACCACCACCCACCGTGACGGCGTCGTTCTCCCACGAATAATCTTCGTCGCAGAAGGCGATGATGACGAAGACGGAGACGAAGAGCGCGGCGCGGTGGGGTTGGAACAGAACGTGATAAACTCGTATCCGAGGTTTCAATTCAGCAGGGACAGCAGTAACATCGGACAGAACACCACGTGTTCCATATGTCTGTGTGAGTACAAGGATTCGGAGATGCTGAGGATGATGCCGGAGTGCAGGCACTATTTCCACGTCTGCTGCCTTGACTCCTGGCTTAGGCTTAATGGCTCCTGCCCCGTTTGCCGGAACTCGCCGCTTCCGACGCCGGTTCCCACGCCGCTGTCGACGCCGCTGCAGGAGGTGGTGCCGCTGTCTCAGTATGCTGCTGATAGGAGGAGGAGGTGA 558 0.552 MSMSSTSSFLNHLGLGYSIAIALAFLVLLSTLILSSYLCCNRNRRNNINNPTTTHRDGVVLPRIIFVAEGDDDEDGDEERGAVGLEQNVINSYPRFQFSRDSSNIGQNTTCSICLCEYKDSEMLRMMPECRHYFHVCCLDSWLRLNGSCPVCRNSPLPTPVPTPLSTPLQEVVPLSQYAADRRRR 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03332 185 PANTHER RING-H2 FINGER PROTEIN ATL67 3 185 IPR044289 GO:0016567|GO:0016740
Arst4g03332 185 SUPERFAMILY RING/U-box 101 159 - -
Arst4g03332 185 SMART ring_2 111 152 IPR001841 -
Arst4g03332 185 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 157 IPR013083 -
Arst4g03332 185 Pfam Ring finger domain 110 153 IPR001841 -
Arst4g03332 185 ProSiteProfiles Zinc finger RING-type profile. 111 153 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03332 Arst-Chr4 111338078 111339132 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03332 3 176 C3H Transcription Factor Family AT5G07040 40.341 1.94e-33 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03332 - - csv:101216614 243.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g03332 4 111338078 111339132 Arst4g03332 4 111338078 111339132 ECH
Arst4g03332 4 111338078 111339132 Arst2g00315 2 2817132 2817824 PCT