Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03320 ATGGAGATGGAGCTTGATTGGGATCTCCATGCGGTGGTTCGAGGCTGCTCCACCCTCACCTCTTCATCTTCATCTTCTTCTTCTTCCTCATCCTCTTCTGGGTTCGGTTACTTTTACTCTCAAGCTTCTCCTTCTTCTGTCCTTGACACTGAAGACCAACACCAACAACAAGGAATTACCAACAATGTTATGTCTTTTTCTGCTGCTTCATATTCATACCCCTTTGGACCAAGGACCGCCATTGAAGAGTTGCATGAGCTTTGCAAGCCTTTCTTTACAAAATCACTCCCTCAACAACAACAATCATTGCAAGCTTCTTCTCCTTTGTCTTCATTCTCTGTAGCACCACCACCACCACCACCAAAACCTGTTCATGCACAAGAGAAGCAACAGAGAAGCAACACCAACAAGCATCCTCACCCTGGTGGTGATTCTGTCAACACCCCAAGATCTAAAAGAAGGAAGAACCAGCTCAAGAGAGTTTGTCAGGTACCAGTTGAGAATCTCTCATCAGACATATGGGCATGGAGGAAATATGGACAGAAACCCATAAAGGGGTCACCATATCCAAGGGGATACTATAGATGTAGCAGCTCAAAGGGATGTTTGGCAAGGAAACAAGTTGAAAGGAACAGAACGGATCCAACAATGTTCATAGTAACCTACACAGCAGAACACAACCACCCTGCTCCAACTCACAGGAACTCCCTTGCCGGATCGACGCGCCAAAAGCCGTTGACACCTCAGGCAGCTGCGGCCACCACCACCAACGGTGGAGAATCTGATGAGAAGGCCTTGACACCAACGAAATCGGCTTCGCCTGATATCTCAGTTGCGGAAGAAGAGGCTTTACCACAACATTGTGAAAAGTCATCAGTGAGCAGAGAAGAGAAGGAAGAGGATTTGGCTGATGATGATGATGATGAGTTTGGTTTATCTGATATGGTGATACCTGATGATTTCTTTGATAGTTTTGATGAACTGAAAGAGATCACTGGTATTGATGATGATGGAATTAGAGGAGATAATTTCTTTGTTGATCCCTTTTCAGCCATTGCTATGCCTTCTTGGGTTGCCAATAGTGCTGCCACTGCTGCTGGTGGTAGCTGA 1110 0.4577 MEMELDWDLHAVVRGCSTLTSSSSSSSSSSSSSGFGYFYSQASPSSVLDTEDQHQQQGITNNVMSFSAASYSYPFGPRTAIEELHELCKPFFTKSLPQQQQSLQASSPLSSFSVAPPPPPPKPVHAQEKQQRSNTNKHPHPGGDSVNTPRSKRRKNQLKRVCQVPVENLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRTDPTMFIVTYTAEHNHPAPTHRNSLAGSTRQKPLTPQAAAATTTNGGESDEKALTPTKSASPDISVAEEEALPQHCEKSSVSREEKEEDLADDDDDEFGLSDMVIPDDFFDSFDELKEITGIDDDGIRGDNFFVDPFSAIAMPSWVANSAATAAGGS 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03320 369 MobiDBLite consensus disorder prediction 282 298 - -
Arst4g03320 369 FunFam WRKY transcription factor 22 154 224 - -
Arst4g03320 369 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 6 330 IPR044810 GO:0003700
Arst4g03320 369 ProSiteProfiles WRKY domain profile. 165 231 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst4g03320 369 MobiDBLite consensus disorder prediction 99 162 - -
Arst4g03320 369 SUPERFAMILY WRKY DNA-binding domain 168 231 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst4g03320 369 MobiDBLite consensus disorder prediction 228 274 - -
Arst4g03320 369 SMART WRKY_cls 170 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst4g03320 369 Pfam WRKY DNA -binding domain 172 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst4g03320 369 Gene3D WRKY domain 154 224 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst4g03320 369 MobiDBLite consensus disorder prediction 227 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03320 Arst-Chr4 111255256 111257627 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03320 3 368 WRKY Transcription Factor Family AT4G01250 44.444 2.49e-82 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Arst4g03320 WRKY 3.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03320 K13425 - gmx:100170675 362.073
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g03320 4 111255256 111257627 Arst5g04420 5 105523639 105526956 ECH
Arst4g03320 4 111255256 111257627 Arst4g03320 4 111255256 111257627 ECH
Arst2g00303 2 2738694 2740504 Arst4g03320 4 111255256 111257627 ECH
Arst9g00409 9 3328122 3335028 Arst4g03320 4 111255256 111257627 ECH
Arst4g03320 4 111255256 111257627 Arst2g00303 2 2738694 2740504 PCT