Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03311 ATGGCAACCACTCATTCTCTTCTTCACTCGTCGAGTTCCTCTTTCCTTGCTCAGTTTCGTCCCTTTCCACCTCCACACTCTTCTTCTTCTTCATCATCTTCTGTTCCGTTTTCTCATGGAACAAGGCATGGATTGCTGTCTGTGAAGGCCTCTGATTCTGGTGCTGCGGTGCTCGTTGACAAGTCCGAAGCAGAGACTGTTCATCGTCTCAAAACTACTTACAAAGACAAAATTGTTCCTTTGCTCATGGAGGAGTTCAATTACACCAATATCCACCAGGTGCCGAAGATTGAGAAAATTACAGTTAACTGCGGTATTGGTGATGCTGCACAAAATGCAAAGGGTTTGGAAGCAGCAATGAATGATCTGGCTCTGATCACAGGGCAGAGACCGATTAAGACTCGGGCTAGGGCTTCTGTTGCCACCTTCAAGATTAGGGAAGGTCAACCACTTGGGATAGCCGTGACACTCAGAGGAAAGGTCATGTACAACTTCCTAGACCGAGTTATCAACTTAGGACTTCCTAGGACAAGAGATTTTCAAGGTCTGAACCCCAACAGCTTTGATGGCAATGGGAACTACAGCGTCGGCGTTAAGGACCAGGGTGTGTTCCCGGAGATCAAATACGACGCTGTCGGAAAACCTAGGGGAATGGATATCTGCATCACGACGACGGCTAAAACCGATCAAGAAGCGCAAAAGTTGTTAGTTCTTATGGGCATGCCATTCAGAGAGGGAGGTGGTCCTGCCTCTACTATGCGCAAGAAGAAGCTCAAGTCTCATCATTTTGATCCAAAAGCAAAGGGAAGAGCAAGGAAGTAA 822 0.4708 MATTHSLLHSSSSSFLAQFRPFPPPHSSSSSSSSVPFSHGTRHGLLSVKASDSGAAVLVDKSEAETVHRLKTTYKDKIVPLLMEEFNYTNIHQVPKIEKITVNCGIGDAAQNAKGLEAAMNDLALITGQRPIKTRARASVATFKIREGQPLGIAVTLRGKVMYNFLDRVINLGLPRTRDFQGLNPNSFDGNGNYSVGVKDQGVFPEIKYDAVGKPRGMDICITTTAKTDQEAQKLLVLMGMPFREGGGPASTMRKKKLKSHHFDPKAKGRARK 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03311 273 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 71 246 IPR002132 GO:0003735|GO:0005840|GO:0006412
Arst4g03311 273 FunFam 50S ribosomal protein L5 65 245 - -
Arst4g03311 273 Gene3D - 61 245 IPR022803 -
Arst4g03311 273 MobiDBLite consensus disorder prediction 254 273 - -
Arst4g03311 273 Pfam Ribosomal protein L5 90 146 IPR031310 -
Arst4g03311 273 Hamap 50S ribosomal protein L5 [rplE]. 67 245 IPR020930 GO:0003735|GO:0005840|GO:0006412
Arst4g03311 273 Pfam ribosomal L5P family C-terminus 150 243 IPR031309 -
Arst4g03311 273 SUPERFAMILY RL5-like 69 244 IPR022803 -
Arst4g03311 273 ProSitePatterns Ribosomal protein L5 signature. 123 139 IPR020929 GO:0003735|GO:0005840|GO:0006412
Arst4g03311 273 MobiDBLite consensus disorder prediction 246 273 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03311 96 223 Cytoplasmic Ribosomal Protein Gene Family AT2G42740 27.344 1.40e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03311 K02931 - gmx:100800193 401.749