Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03310 ATCGGAATCCTCGTCGGAGTCCTCATCGTATTTACCCTCTTTCTTCTCTCCCTCTGCCTCACCTCCCGCCGCCACCGCCGCCGCCGAACCGTTGCCGGAAAATATTCATCCGCTGGAGCACCACCAGCCAAGGAGATCCAGGAGATAGTCCACCTCCCTGGACCACACATGCTCCGGCAGCCTCAGGCGCCGGCGCCGGTGCCAGAGATTCACGTTGACTTCGGAAAAGTGGAGCATCGTGTGGTGGTACACTCTGATAACAACAACAACAGCAACAATAGAGGAGTGTCTAGTGGTGAAAGTAAAGGAACTGTTAGTGGCTGTGAAACGACATCGTCGTTTGGGAGTGGGAGTGTCGTTTTGGGGGTTGGTGGTGGTGGTGTTGGTGTGGGACCTGAGGTTTCTCATCTTGGTTGGGGAAGATGGTACACTTTGAGAGAACTTGAAGCTGCTACTAATGGATTGTGTGAAGAGAATGTGATTGGTGAAGGTGGTTATGGCATTGTTTATTCTGGCGTTCTAAGTGATGGTACCAAAGTTGCTGTCAAGAATCTCTTGAATAACAAGGGCCAAGCTGAGAGAGAATTTAAAGTAGAGGTAGAAGCAATTGGTCGAGTTCGACACAAAAATCTTGTTAGGTTACTTGGCTATTGTGTTGAGGGGGCCTACAGGATGCTTGTGTATGAATATGTGAACAATGGGAATCTAGAACAATGGCTGCATGGGGATGTTGGACCTTTAAGTCCTTTGACATGGGATATACGCATGAACATCATCTTGGGAACTGCAAGAGGATTGGCATATCTTCATGAAGGTCTTGAACCAAAGGTTGTCCACCGGGATGTGAAATCGAGTAATATACTCATTGATCGCCAATGGAACTCTAAGGTTTCTGATTTCGGGCTCGCTAAACTTTTGTGTTCTGAGAATAGCTACGTCACAACTCGAGTGATGGGGACATTTGGTTATGTTGCACCGGAGTATGCCTGCACCGGAATGTTGACCGAAAAGAGTGACGTTTATAGCTTCGGGATACTCATCATGGAGATAATTACCGGGAGGAGTCCTGTCGATTATAGTAGACCACAAGGAGAGGTTAACTTAATAGATTGGTTGAAGACTATGGTTGGGAATAGAAAAGCTGAAGAGGTAGTTGATCCTAAGCTCCCTGAGATGCCAACCTCCAAGGCCCTTAAACGTGCTATATTGATTGCCCTTCGATGTGTTGACCCTGACGCGACAAAGAGGCCTAAAATGGGACATGTGATCCACATGCTTGAGGCAGATGATCTGTTATTCCAACATGAACGAAAAACTGAGGGAGAATCTTCGCGTTCGCAACGACAAGAGCGCAAGGACTCAGATTTAGATAAGAGGATACCAGATGGAGGGATCACTGATCAAAGTGAAGATGATACTAGTAGAAATCACCAGCAGCATACTAGGTGGAGATGA 1455 0.4715 MSIFDGAFMDTELSKRTSIFGLRLWVVIGILVGVLIVFTLFLLSLCLTSRRHRRRRTVAGKYSSAGAPPAKEIQEIVHLPGPHMLRQPQAPAPVPEIHVDFGKVEHRVVVHSDNNNNSNNRGVSSGESKGTVSGCETTSSFGSGSVVLGVGGGGVGVGPEVSHLGWGRWYTLRELEAATNGLCEENVIGEGGYGIVYSGVLSDGTKVAVKNLLNNKGQAEREFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVNNGNLEQWLHGDVGPLSPLTWDIRMNIILGTARGLAYLHEGLEPKVVHRDVKSSNILIDRQWNSKVSDFGLAKLLCSENSYVTTRVMGTFGYVAPEYACTGMLTEKSDVYSFGILIMEIITGRSPVDYSRPQGEVNLIDWLKTMVGNRKAEEVVDPKLPEMPTSKALKRAILIALRCVDPDATKRPKMGHVIHMLEADDLLFQHERKTEGESSRSQRQERKDSDLDKRIPDGGITDQSEDDTSRNHQQHTRWR 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03310 511 ProSiteProfiles Protein kinase domain profile. 182 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03310 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 304 316 IPR008271 GO:0004672|GO:0006468
Arst4g03310 511 Pfam Protein kinase domain 185 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03310 511 CDD STKc_IRAK 188 454 - -
Arst4g03310 511 ProSitePatterns Protein kinases ATP-binding region signature. 188 210 IPR017441 GO:0005524
Arst4g03310 511 Gene3D Transferase(Phosphotransferase) domain 1 258 471 - -
Arst4g03310 511 FunFam Putative receptor-like serine/threonine-protein kinase 258 468 - -
Arst4g03310 511 FunFam Probable serine/threonine-protein kinase At1g01540 162 257 - -
Arst4g03310 511 PANTHER OS01G0323000 PROTEIN 8 479 - -
Arst4g03310 511 MobiDBLite consensus disorder prediction 112 136 - -
Arst4g03310 511 Gene3D Phosphorylase Kinase; domain 1 166 257 - -
Arst4g03310 511 SMART serkin_6 182 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03310 511 MobiDBLite consensus disorder prediction 464 511 - -
Arst4g03310 511 SUPERFAMILY Protein kinase-like (PK-like) 161 454 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03310 Arst-Chr4 110892200 110896349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03310 169 510 Trihelix Transcription Factor Family AT5G38560 45.042 1.08e-94 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Arst4g03310 Pkinase 2.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03310 - - gmx:100800724 728.013