Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03300 ATGGCATCCGCCTCTTCTTCCACTTCAATCCCACTACCATCACGACGATCATGTACCTATGACGTGTTCTTGAGTTTTAGAGGAGAAGATACTCGCACAGGCTTCACTGGCCATCTCTATGCGGCCCTCAACAGGAAGGGAATCACAACCTACAAAGATGACAAAAACCTTCGCAAAGGCCATGTTATTTCAAAAGAACTCCTCAAAGCAATTGAAGAGTCCATGTTTGCAGTCATTGTTTTCTCACCGGACTACGCTTCCTCCAGTTGGTGCTTGGACGAGCTCCAAAAGATCATTGAGTGTAAGAACCAGCTGGGGCTACAGATCGAGGCAGTGTTTTACGGTGTGGAGCCTTGTGATGTGAGGCACCAAAGAGGAACCTTTGAGGAAGCTTTCAACAAACACGAACAGCGACATGACCGTGAGAAAGTCAAGAGATGGAAAGATGCGCTAACAGAAGTTGCTGCTCATTCTGGTTGGACCTCCAAAAATCAGGACGAAGCAGTACTTGTGGAAAATATTACTCAACATATATTTGAAATATTGATTCCTAAGTTGCCATCTTCAATGAAGAATCTTGTGGGGATTAATTCAAGAGTGGAACAAGTGATTACTCTCATAGGCCTTGGATTGAATGATGTTCGCTTTATAGCCATATGGGGAATGGGCGGTATGGGCAAGACCACTATTGCTAGAGCAGTTTTTGATATCATTCAAAGTAGATTTGAAGTTACGTGCTTTCTTTACGATGTAAGGGATAGATGCGAGAAAAAAGATATTACTCACATACAAAAGCAACTTCTTAAACAAATGAATATAAGTTCAAATGTTGTTCATGATAAGGAAGAGTGGAGGAGAATGATTAAAAACTCTCTACATCTCAAAAAGGTACTTCTTGTTCTTGATGATGTAAATCATGAAAAACAATTAGAAAATTTGGCTGGGGAAAAAGATTGGTTTGGTCCTGGAAGCAGAATAATAATGACAACTAGAGATTTCCATATGCTAAGGAAAAATAAGTTGCATGAAACTTATAACGTTGAAGGGTTAGTGGAAAGGGAAGCCCTTAACCTCTTTTCTTTAGAAGCTTTTAACCTGCCAAAACCTTCAGAAGAGTTTTTGGATTTGTCCAAAGAAGTGGTCAAATACAGCGGTGGTCTCCCATTGGCACTTAAAGTATTGGGTTCCTATCTTAATGGTAGACCTATTGCGGTTTGGCATAGTGCTATTAAAAGAATAAAGAAGTCTTCACATTCTGAAATTATTGATGTATTGAAAATAAGTTATATGGGTTTAGAAGATACAGAAAAGAATATTTTTTTAGATATTGCTTGTTTCTTTAAAGGGTGGCCGAAAGATTATGCAACAGAGATATTAGAAAGATGTGGTCATGATGCTGAAATCGGTATTGATATTTTGATTAATAGATCATTGGTCACTATACACCAAAATAATACGTTGGGGATGCATGATCTGCTTGAAGAAATGGGCAAACAAATTGTAATTCAAAAATCTCCGAATGATACTTGTAAGCATAGCAGATTGTGGTGTTTGGAGGATGTTGAATTTGTACTTACTCAAAAGAAGGAAACTGAAGCAATTCATAGCATCGTTCTACATAAGGTGTATAGGAAAACTGAAGTGAATCAGAGAGATTTATCTTTCTCAAAAATGTGCCAGTTAAAGCTTCTCGTTTTAGATTTTGTGGAAGTTCCCATTCTCTGCGATATTCCTTGTACATTAAAGGTATTTCACTGGATTAGTTGTCCACTGAAAACTCTGCCCCTTAAAGATCATCAACACTATGAACTCGTTGAAATTGTTCTATCTTGTAGCGAAATTGTACAGTTATGGGATGGAGAGAAGGTTCTAGAAAAGTTAGAGTACTTGGATCTGTCAGGGTGCAGGCAGCTGAAGCAAACGCCAGATCTTTCTAGGGCTCCCAATCTTAAAAAACTTGATCTATGGGGATGCAAGGAGCTGGATTATATTCACCGGTCTCTTGCACACCACAAAAGGCTTGTTGAATTGAAGTTAAGTGAATGTAGGAGTCTTAAAACACTTGGAGAAAAATTGGAGATGAGTTCACTCGAGATACTAGATCTATCTGATTGCAGTAGATTGAGAAGACTGCCAGATCTTTCTGGGGCTCCCAATCTTAAAACGCTTGATCTTGATGGATGTGAGGAGCTAAATTATTTTCACCCATCTCTCGCACACCACAAGAGGCTTGTTGATTTGAATTTAAGGGGATGTGGGAGACTTGAAACACTTGGAGATAAATTGGAGATGAGTTCACTCGAGAGACTAGATCTAGAATCTTGCAGTAGTTTGAGAAGACTGCCAGAATTTGGGGACTGCATGAAACAGTTATCGATTCCTGAGCTGAGATATACAGGTATAGAAGGGGTACCCACGTCGCTTGGAAGTTTGGCTGGCATGTCTGAGTTGGACTTAAGTGGATGCGACAATATTACTGGTCTTCCCTTATCACTTGGATGTTTTGTTGGCCTAAAAAAGTTGGTGTTAAGTAGATTCGTGGAGCTTAGTTGTCTTCCACACAAAACTCACGGGTTAGAGTCCCTCAAAGTTGAGGATTTTTCTGACAGCACAAATATTGTTGGATTTTTGCGTTCTCTCCCTTGCCTGACATCTTTGAGTAGCCTGACCCTTTCCTACGATATCGGGTCATCAAGAGAAGAGTCGACCCTTTCCTATGATATTGCCCACTTAGCGTCGTTGACGCATTTGGATTTATCTCACAGCAGTTTTTTAAGAGTTCCAATAAGTATCCATCAACTTCCCAGACTTACATGTCTAAAGCTATCTTTTTGCGATGAATTGGAGGTTTTACCAGAGCTTCCATCAAGTCTACGAGAATTAAACGCAGAGTGTTGTTATTCACTAGATGCATCAAATGTTGATGATGTTATATCAAAGGCGTGTTGTGGCTTTGCAGAATCAGCTAGCCAAGATCGTGAAGACATCTTGCAAATGTTGATCCCTGGGAAGGAAATTCCAGCATGGTTTGAGCATCAGGAACAAGATGAGGGAGTATCACTCTCATTCCCACTTAATTGCCCTTCAACTGAAATGGTCGCACTTGCTCTCTGTTTCCTATTTGACAGTATCCAAGATCTCCATAGATTTTGGCCTAAGGTGATCTGCAACGGGAAAGAATTCATCAACGCGACTTTATACGTGACGACTGGTTCAGATAATTTGTTCATTGTGTGCGTGAACGGTTACTATTTTAGTAAGCTGTTATGCCAACACAATCGCTTCCAAATGTTATTTCCAGTTGATATCCGAGTAAAGAGATGTGGAGCACGTTGGGTGTGCAAGCAAGACATTCAAGAATTCAAGAAAAGAAGATCCCAAACAGGGAAAAGAAAAGCAACTCTTGAACTGAACATGGACATGATCCCACATTCTTCAACTTCTAGGAATAAGATGCTTGTGGTTGCCCCTCAACTAAATGAACAAGAGGAAGAGCGAGCCGTCACAGCGGAGGGCCCTATCCGCCATTTGGCATCTCGCAAAAGCTCTGACCCACCTGAACTCTTACCTCTCTTTCCTTTGCATCCCAGTTCTCATAGCTCATGA 3606 0.404 MASASSSTSIPLPSRRSCTYDVFLSFRGEDTRTGFTGHLYAALNRKGITTYKDDKNLRKGHVISKELLKAIEESMFAVIVFSPDYASSSWCLDELQKIIECKNQLGLQIEAVFYGVEPCDVRHQRGTFEEAFNKHEQRHDREKVKRWKDALTEVAAHSGWTSKNQDEAVLVENITQHIFEILIPKLPSSMKNLVGINSRVEQVITLIGLGLNDVRFIAIWGMGGMGKTTIARAVFDIIQSRFEVTCFLYDVRDRCEKKDITHIQKQLLKQMNISSNVVHDKEEWRRMIKNSLHLKKVLLVLDDVNHEKQLENLAGEKDWFGPGSRIIMTTRDFHMLRKNKLHETYNVEGLVEREALNLFSLEAFNLPKPSEEFLDLSKEVVKYSGGLPLALKVLGSYLNGRPIAVWHSAIKRIKKSSHSEIIDVLKISYMGLEDTEKNIFLDIACFFKGWPKDYATEILERCGHDAEIGIDILINRSLVTIHQNNTLGMHDLLEEMGKQIVIQKSPNDTCKHSRLWCLEDVEFVLTQKKETEAIHSIVLHKVYRKTEVNQRDLSFSKMCQLKLLVLDFVEVPILCDIPCTLKVFHWISCPLKTLPLKDHQHYELVEIVLSCSEIVQLWDGEKVLEKLEYLDLSGCRQLKQTPDLSRAPNLKKLDLWGCKELDYIHRSLAHHKRLVELKLSECRSLKTLGEKLEMSSLEILDLSDCSRLRRLPDLSGAPNLKTLDLDGCEELNYFHPSLAHHKRLVDLNLRGCGRLETLGDKLEMSSLERLDLESCSSLRRLPEFGDCMKQLSIPELRYTGIEGVPTSLGSLAGMSELDLSGCDNITGLPLSLGCFVGLKKLVLSRFVELSCLPHKTHGLESLKVEDFSDSTNIVGFLRSLPCLTSLSSLTLSYDIGSSREESTLSYDIAHLASLTHLDLSHSSFLRVPISIHQLPRLTCLKLSFCDELEVLPELPSSLRELNAECCYSLDASNVDDVISKACCGFAESASQDREDILQMLIPGKEIPAWFEHQEQDEGVSLSFPLNCPSTEMVALALCFLFDSIQDLHRFWPKVICNGKEFINATLYVTTGSDNLFIVCVNGYYFSKLLCQHNRFQMLFPVDIRVKRCGARWVCKQDIQEFKKRRSQTGKRKATLELNMDMIPHSSTSRNKMLVVAPQLNEQEEERAVTAEGPIRHLASRKSSDPPELLPLFPLHPSSHSS 1201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03300 1201 Gene3D - 179 344 IPR027417 -
Arst4g03300 1201 Gene3D Ribonuclease Inhibitor 795 979 IPR032675 -
Arst4g03300 1201 Gene3D Ribonuclease Inhibitor 693 792 IPR032675 -
Arst4g03300 1201 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 695 IPR044974 GO:0006952
Arst4g03300 1201 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 160 IPR035897 -
Arst4g03300 1201 Pfam C-JID domain 1001 1118 IPR045344 -
Arst4g03300 1201 Gene3D Ribonuclease Inhibitor 549 692 IPR032675 -
Arst4g03300 1201 SUPERFAMILY L domain-like 537 893 - -
Arst4g03300 1201 SMART till_3 19 157 IPR000157 GO:0007165
Arst4g03300 1201 MobiDBLite consensus disorder prediction 1164 1182 - -
Arst4g03300 1201 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 183 - -
Arst4g03300 1201 MobiDBLite consensus disorder prediction 1162 1201 - -
Arst4g03300 1201 Gene3D - 13 178 IPR035897 -
Arst4g03300 1201 Pfam NB-ARC domain 212 417 IPR002182 GO:0043531
Arst4g03300 1201 Pfam TIR domain 20 194 IPR000157 GO:0007165
Arst4g03300 1201 SUPERFAMILY "Winged helix" DNA-binding domain 419 525 IPR036390 -
Arst4g03300 1201 Gene3D - 350 433 IPR042197 -
Arst4g03300 1201 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 443 IPR027417 -
Arst4g03300 1201 PRINTS Disease resistance protein signature 291 305 - -
Arst4g03300 1201 PRINTS Disease resistance protein signature 692 708 - -
Arst4g03300 1201 PRINTS Disease resistance protein signature 216 231 - -
Arst4g03300 1201 PRINTS Disease resistance protein signature 384 398 - -
Arst4g03300 1201 SUPERFAMILY RNI-like 856 975 - -
Arst4g03300 1201 ProSiteProfiles TIR domain profile. 18 182 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03300 Arst-Chr4 110646901 110659533 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03300 20 817 WRKY Transcription Factor Family AT4G12020 30.807 1.46e-95 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03300 - - ahf:112744175 1769.98