Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03288 ATGGCATCCGCCTCTTCTTCCACTTCAATCCTACCACAACTATCATGCACCTATCACGCGTTCTTGAGTTTCAGAGGAGAAGACACTCGCACAGGCTTCACTGGCCATCTCTATGCGGCCCTCAACAGGAAGGGAATCACAACTTACAAAGATGACAAAAACCTTCGCAAAGGCGATGTTATTTCAAAAGAACTCCTCAAAGCAATTGAAGAGTCGATGTTTGCAGTCATCGTTTTCTCACCGGACTACGCTTCTTCGAGTTGGTGCTTGGATGAGCTCCAAAAGATCATGGACTGCAACAACAAGGTGAGGCAACACATCGTGCCGGTGTTCTACGGTGTGGAGCCTTGTGATGTGAGACATCAAAGAGGAACCTTTGAAAAAGCTTTCAAGAAACACGAACAGAGACATGACAGTGAGAAGGTCAAAAGATGGAGAAATGCACTAACACAAGTTGCTGCTCATTCTGGTTGGACCTCCAAAAATCAAGACGAAGCAGTACTTGTGGAAAATATTGCTCAACATATATTTGAAATATTGATTCCTAAGTTGCCATCTTCAATGAAGAATCTTGTGGGGATTAAATCAAGAGTGGAACAAGTGATTACTCTCATAGGCCTTGGATTGAATGATGTTCGCTTTATAGCCATATGGGGAATGGGCGGCATGGGTAAGACCACTATTGCTAGAGCTGTCTTTGAAACCATTCGAAGTAGCTTTGAAGTTACTTGCTTTCTTGCCGATGTAAGGGAGCAATGTGCGAAAAAAGATATTACTCACATACAAAAGCAACTTCTTGAACAAATGAATATAAGTTCAAATGCTGTTTATAACAAGTATGAGGGGAGGAAAATAATTCAAAACTCTTTACGTCTCAAAAAGGTACTTCTTGTTCTTGATGATGTAAATCATGAAAAACAATTAGAGGATTTGGCTGGGGAGCAAGATTGGTTTGGTCCTGGGAGCAGAATATTAATTACAACTAGAGACGTAGAGGTGCTAAAGGGACCAGAGGTGCATGAAACTTATAAGGTTGAAGGGTTAGTGGAAAGTGAAGCCTTTAACCTCTTTTGTCTGAAAGCCTTTAAACAGGAGGAGCCTACAGAAGGGTTTTTGGATTTGTCTGAAGAAGTGGTCAAGTACAGTGGTGGTCTTCCATTGGCACTTAAAGTATTGGGTTCCTATCTTAATGGTAGACCTATTGCGGTTTGGCATAGTGCTATTGAAAAAATAAAGAAGTCTTCACATTCTGAAATTATTGATGCATTGAAAATAAGCTATGAGGGTTTAGATGATATGGAAAAGAATATTTTTCTAGATATTGCTTGTTTCTTTAAAGGATATCAGAAAGATGATGTAACAAGGATATTAGAAGGATGTGGTTATCAGGCTGAAATTGGTCTTGATATTTTAATTAACAGATCATTGGTCACATTACATTGGGATATGTTTAGGGAGGTTATTATTTTAGGGATGCATGATCTACTTGAAGAAATGGGCAAATTTATTGTAATTCAAGAATCTCCAAATGATGCTAGTAAGCATAGCAGATTGTGGTGTTACGAGGATGTTGATTTTGTACTTACTCAAAAGAAGAAAACTAAAGCAACTCATGGCATCGTTCTACATAAGTGGTATAGCGAGACTGAAGTGAATCAGAGAGATTTATCTTTCTCAAAAATGTGCCAGTTAAAGCTTCTCATTTTAGATGGCGTCACAGCTCCCATTCTGTGCGATATTCCTTGTGCATTAAAGGTATTTCACTGGAGATTTTATCCACTGAAAACTTTGCCCCTTACAGATCATCAACGCTATGAACTTGTTGAAATTGATCTGTCTTATAGCAAAATTGTAGAGTTATGGGATGGAAAGAAGTTTCTAGAAAAGTTAGAGCACTTGAATCTGGTCGGGTGCAAACAGTTGAAGCAAACGCCAGATCTTTCTAAGGCTTCCAATATTAAAGAACTTGATCCTAGGGAATGCAAGGAGCTGGATCATATTCCCCCGTCTCTCGCACAACACAAAAGGCTTGTTGAATTGAATTTACGATATTGTGAGAGACTTGAAACACTTGGAGAAAAATTGGAGATGAGTTCACTCGAGATACTAGATCTAACTGACTGCAGTAGTTTGAGAAGACTGCCAGATCTTTCTGGGGCTCCCAATCTTAAAAAACTTGATCTCTTGGCGTGCGAGGAGCTGGATTATATTCACCCGTCTCTCGCACACGACAAGAGCCTTGTTGAATTGAATTTAGGATATTGTGAGAGTCTTAAAACACTTGGAGATAAATTGGAGATGAGTTCACTCGAGAAACTAGATCTAAGGTGCTGCAGTAGTTTGAGAAGACTGCCAGAATTTGGGGAATGCATGAAACAGTTATCGATTCTTAATCTGAAAGGTACAGGTATAGAAGAGCTACCCCCGACGCTTGGAAATTTGGCTGGCGTGTCTGAGTTGGACTTAACTGGATGCAGCAAGATTACTGGTCTTCTCTTATCACTTTCATTAGGATGTTTCGTTGGCCTTAAAAAGTTGTTGTTAGGTGGTCTTCCACGGAAAACTGATGGGTTAGAGTTCCTCACAGTCAGTGCTGATTATGATGATTCTGACAGCTCATCTTTGAGTAGCCTGGCCCTTTCCTCCGATATTGGCTCATCTAGAGAAGAGTCGACCCTTTCCTATGATATTCGCCACTTAGCGTCCTTGACGGATTTGGATTTAGGTGAGAGCAGTTTTTTAAGAGTTCCAATAAGTATCCATCAACTTCCCAGACTTACACGTCTGAAGCTATCTCGTTGCTCTAAATTGAAGGTTTTACCAGAGCTTCCATCAAGTCTAAGAGAATTAAACGCACAGGGTTGTTATTCACTGGACGCATCCAACGTTGATGATGTTATATCAAAAGGCGTGTTGTGGCTTTGCAGAATCAGCTAG 2937 0.4025 MASASSSTSILPQLSCTYHAFLSFRGEDTRTGFTGHLYAALNRKGITTYKDDKNLRKGDVISKELLKAIEESMFAVIVFSPDYASSSWCLDELQKIMDCNNKVRQHIVPVFYGVEPCDVRHQRGTFEKAFKKHEQRHDSEKVKRWRNALTQVAAHSGWTSKNQDEAVLVENIAQHIFEILIPKLPSSMKNLVGIKSRVEQVITLIGLGLNDVRFIAIWGMGGMGKTTIARAVFETIRSSFEVTCFLADVREQCAKKDITHIQKQLLEQMNISSNAVYNKYEGRKIIQNSLRLKKVLLVLDDVNHEKQLEDLAGEQDWFGPGSRILITTRDVEVLKGPEVHETYKVEGLVESEAFNLFCLKAFKQEEPTEGFLDLSEEVVKYSGGLPLALKVLGSYLNGRPIAVWHSAIEKIKKSSHSEIIDALKISYEGLDDMEKNIFLDIACFFKGYQKDDVTRILEGCGYQAEIGLDILINRSLVTLHWDMFREVIILGMHDLLEEMGKFIVIQESPNDASKHSRLWCYEDVDFVLTQKKKTKATHGIVLHKWYSETEVNQRDLSFSKMCQLKLLILDGVTAPILCDIPCALKVFHWRFYPLKTLPLTDHQRYELVEIDLSYSKIVELWDGKKFLEKLEHLNLVGCKQLKQTPDLSKASNIKELDPRECKELDHIPPSLAQHKRLVELNLRYCERLETLGEKLEMSSLEILDLTDCSSLRRLPDLSGAPNLKKLDLLACEELDYIHPSLAHDKSLVELNLGYCESLKTLGDKLEMSSLEKLDLRCCSSLRRLPEFGECMKQLSILNLKGTGIEELPPTLGNLAGVSELDLTGCSKITGLLLSLSLGCFVGLKKLLLGGLPRKTDGLEFLTVSADYDDSDSSSLSSLALSSDIGSSREESTLSYDIRHLASLTDLDLGESSFLRVPISIHQLPRLTRLKLSRCSKLKVLPELPSSLRELNAQGCYSLDASNVDDVISKGVLWLCRIS 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03288 978 SUPERFAMILY RNI-like 805 959 - -
Arst4g03288 978 Gene3D - 348 431 IPR042197 -
Arst4g03288 978 PRINTS Disease resistance protein signature 695 711 - -
Arst4g03288 978 PRINTS Disease resistance protein signature 214 229 - -
Arst4g03288 978 PRINTS Disease resistance protein signature 289 303 - -
Arst4g03288 978 PRINTS Disease resistance protein signature 382 396 - -
Arst4g03288 978 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 441 IPR027417 -
Arst4g03288 978 Gene3D Ribonuclease Inhibitor 551 695 IPR032675 -
Arst4g03288 978 Pfam TIR domain 18 192 IPR000157 GO:0007165
Arst4g03288 978 Gene3D - 15 180 IPR035897 -
Arst4g03288 978 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 698 IPR044974 GO:0006952
Arst4g03288 978 Gene3D Ribonuclease Inhibitor 788 965 IPR032675 -
Arst4g03288 978 Gene3D Ribonuclease Inhibitor 696 787 IPR032675 -
Arst4g03288 978 SMART till_3 17 155 IPR000157 GO:0007165
Arst4g03288 978 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 158 IPR035897 -
Arst4g03288 978 ProSiteProfiles TIR domain profile. 16 180 IPR000157 GO:0007165
Arst4g03288 978 Pfam NB-ARC domain 210 428 IPR002182 GO:0043531
Arst4g03288 978 SUPERFAMILY L domain-like 492 851 - -
Arst4g03288 978 Gene3D - 181 342 IPR027417 -
Arst4g03288 978 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03288 Arst-Chr4 110416719 110490343 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03288 747 952 WRKY Transcription Factor Family AT4G12020 29.665 3.15e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03288 - - adu:107485871 1889.77