Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03285 ATGGCGTCCTTTGTAGGCGATGAAGCCTCTTCTAGCTCATTAATGCCACGACCATGCACCTATAAGGTGTTCTTGAGTTTCAGGGGAAAAGACACTCGCAAGGGATTCACTAGTCATCTCTATGCCGCACTCGTCAACAGGGGAATCACAACTTACATTGATGACAAGAACCTTCCAAAAGGCGATCTTATTTCCCATGAACTCCTCAAAGCAATTGAAGAGTCTATGTTTGGTGTGATAGTTCTCTCACCAAACTATGCTTCATCCACATGGTGCTTGGATGAGCTCCAGAAGATTGTTGAGTGCAACAACAACCTGGGGCTGCAGATTGTGGCAGTGTTCTATCATGTCAAGCCTTGTGACGTCAGGCATCAAATTGGAGCCTTTGAAGAAGCTTTCAAGAAACATGAACTAAGATTTGGACAAGAGAGTGACAGAGTTAGAAGATGGAGAAACGCGTTAAAACAAGTTGCCAGTTATTCAAATTGGGACTCTGAACAATTCAAGAACGAGGCCATACTCGTTGAAAGTATTGCTCAACATATACATGAAAGATTGATTATGAAATTACCATCTTCTATGAAGAATCTAGTAGGGATTGATTCAAGGTTGGAACAAGTTGTTAGACACATTGGTCTTGGGGGGAATGATGTTCGCTTCATTGGCATATGTGGAATGGGTGGCATAGGTAAGACAACTATTTCTAGAAGAGTCTATGAAACCATTAGAAGTGAATTTAAAGCTAGTTGCTTTCTTGCCAATGTAAGAGAGACATGTGAGAAAAGAGGTATTGTTCAAATCCAGAAACAACTTCTTGATCGTACGAACATAAATTCTGATACTAGTTTCCACGATGAGTTTGAGGGAAAAGCTATTATTTGTGACTCTTTGTGCCACAAGAAGGTCCTTCTAGTTCTCGATGATGTAGACGATGGAGGCTTATTGGAGAATTTGGCTGGTGAGCAAGATTGGTTTGGTCCTGGAAGCAGAATAATAATCACAACTAGAGATAAACATGTACTAGAAGTGCACGGAGCAGTCAACAGAATTTGTAAGGTTGAAGGGTTAGAGCAAAATGAAGCACTTGAACTCTTTTGTTTGAAAGCTTTTAAAAGGCCAAAACCTGAAGAAGGGTATATGGATTTGTCCAAAGAAGTGGTTGAGTATTGTGATGGTCTTCCCTTGGCACTCGTAGTATTGGGTTCCCATCTTTGTGGACAAACCATTGATGTTTGGCGCAGTGCTATTGAGAAAATAAAGAGCTTTCCTCATGACAAAATTTTTAATACATTGAAAATAAGTTATGATGGTTTAGATCATTCGGAAAAGAATATCTTTTTAGATATTGCTTGCTTTTTCAAAGGACGTGAGAAAGATTATGCAACAAATATATTGAGAAGGTGTGGTTATCATGCTGAAGCAAGCATTTCTGCTTTAATAAATAAATCTTTGCTCAGTATAATAAATGATGATAAGTATGCCGATATGTTGGGGATGCATGATCTGCTTCAAGATATGGGCAAACATATTGTAATTCAAGAGTCTCGTGATGATCCTAGCAGGCGAAGTAGATTGTGGTCTTACACGGATGTTGATCTTGTACTTGCACAAAACAAGGAAAATGAAGCAACTCATAGCATCGTTCTATATAATATGTACTCGGAGATTGAAAGAAATTGGGGAGATTTGGATATAAGAGATTTATCTTTTTCAAATATGTTCAAGCTAAAGCTTCTCATTTTAGATGGCGTGAAAGTTCCCATTCTCTGCAATATTCCTTGTACATTAAAGGTTTTGCACTGGAAAGGTTGTCCAATGGAAACTCTGCCCTTTACAGATGGACGATATGAACTTGTTGAAATTGATTTGTCTTATAGCAAAATTGTACAGTTATGGGATGGAAAGAAGGTTCTAAAACTGTTACAGCACTTGAATCTATCCTTCTGCGACAAGCTGAAGCAAACGCCAGATCTTTCTGGGGCGCCCAATCTTAAAACACTTAATCTTCATAGGTGTGAGGAGTTGAATTATATTCATCCATCTCTCGCACACCACAAAAGCCTTGTTGAATTGAATTTAATGAACTGTATAGAAGAGTTACCGACGACGCCTGGAAGGTTGGGTGGCGTATCTGAGTTGGACTTGAGTGGATGCAGAAAGCTTACTAGTCTTCCCTTATCACTTGCATGTTTTGTTGGCCTAAAGAAGTTAGAGTTAAGTCGATTTGTGGAGCTTAGTTGTGTTCCATACAGCACTCATGGGTTAGAGTCCCTCACAGCTTATGATAAGTCTGACAACCCAAATATAGTTGGACTTTTGTGTTCTCTCTCTCGCCTCACCTCTTTGAGTACCCTGAAATTATACCGATGTTTTCCCACTTCTAGAAAAGAGTGGAACCTTTACTACAATCTTGGCCACTTAACGTCCTTGACGGATTTGGATTTATCACGCAACTATTTTTTAAGAGTTCCAATAAGTATCCATGAACTTCCCAGGCTTACACGTTTGAATCTAAATGATTGTCGTTTTCTGAAGGTTTTACCAGAGCTTCCATCAAGTCTACGAGAATTACAGGCACAGCGTTGTCATTCACTGGATGCATCCAACGTGAATGATGCGATATCAAAGGCGTGTTGTGGCTTTGCAGAATCAGCTAGCCAAGATCGTGAAGATGTCTTGCAAATGTTGATCCCTGGGAAGGAAATTCCAGCTTGGTTTGAGCATCAGGAACAAGATGATGGAGTATCAGTGTCATTCCCGCATAATTGCCCTTCAACTGAAATCATCACGCTTGCTCTCTGTTTCCTATTAGATGGTTTCACGTTCTTACAAGAACAGCCATCGGTGGTCTGCAACGGTAAAGAATTCATCAACACGAGTTTATTGAAGATGTCACCGGGGACATCTTCTAAGCAATTGTTCATTGTCTGCCTGAACGGTTTCTGTTTTAGTGAGCAGTTATGCCAAGACAATCGCTTCCAAATGCTAGTTCCTTCTTGTGGTTACTTTAATAATATCCGAGTGCTTAGATCTGGAGCATGTTGGGTGATTAAGCAAGACAGTGAAGGTTTCAAGAAAAGAAAATCCAAAACAGGGAAAAGGAAAGCAACTCTTGAACTGGAGATTGACATGATGTCACATTCTTCACCTTCCAGGAATAAGATGTTGGTGGTTGCCCCTCCACTTAATGAACTAGAGGAATAG 3204 0.3998 MASFVGDEASSSSLMPRPCTYKVFLSFRGKDTRKGFTSHLYAALVNRGITTYIDDKNLPKGDLISHELLKAIEESMFGVIVLSPNYASSTWCLDELQKIVECNNNLGLQIVAVFYHVKPCDVRHQIGAFEEAFKKHELRFGQESDRVRRWRNALKQVASYSNWDSEQFKNEAILVESIAQHIHERLIMKLPSSMKNLVGIDSRLEQVVRHIGLGGNDVRFIGICGMGGIGKTTISRRVYETIRSEFKASCFLANVRETCEKRGIVQIQKQLLDRTNINSDTSFHDEFEGKAIICDSLCHKKVLLVLDDVDDGGLLENLAGEQDWFGPGSRIIITTRDKHVLEVHGAVNRICKVEGLEQNEALELFCLKAFKRPKPEEGYMDLSKEVVEYCDGLPLALVVLGSHLCGQTIDVWRSAIEKIKSFPHDKIFNTLKISYDGLDHSEKNIFLDIACFFKGREKDYATNILRRCGYHAEASISALINKSLLSIINDDKYADMLGMHDLLQDMGKHIVIQESRDDPSRRSRLWSYTDVDLVLAQNKENEATHSIVLYNMYSEIERNWGDLDIRDLSFSNMFKLKLLILDGVKVPILCNIPCTLKVLHWKGCPMETLPFTDGRYELVEIDLSYSKIVQLWDGKKVLKLLQHLNLSFCDKLKQTPDLSGAPNLKTLNLHRCEELNYIHPSLAHHKSLVELNLMNCIEELPTTPGRLGGVSELDLSGCRKLTSLPLSLACFVGLKKLELSRFVELSCVPYSTHGLESLTAYDKSDNPNIVGLLCSLSRLTSLSTLKLYRCFPTSRKEWNLYYNLGHLTSLTDLDLSRNYFLRVPISIHELPRLTRLNLNDCRFLKVLPELPSSLRELQAQRCHSLDASNVNDAISKACCGFAESASQDREDVLQMLIPGKEIPAWFEHQEQDDGVSVSFPHNCPSTEIITLALCFLLDGFTFLQEQPSVVCNGKEFINTSLLKMSPGTSSKQLFIVCLNGFCFSEQLCQDNRFQMLVPSCGYFNNIRVLRSGACWVIKQDSEGFKKRKSKTGKRKATLELEIDMMSHSSPSRNKMLVVAPPLNELEE 1067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03285 1067 Pfam TIR domain 21 196 IPR000157 GO:0007165
Arst4g03285 1067 Gene3D Ribonuclease Inhibitor 709 877 IPR032675 -
Arst4g03285 1067 Gene3D - 187 353 IPR027417 -
Arst4g03285 1067 Pfam NB-ARC domain 205 425 IPR002182 GO:0043531
Arst4g03285 1067 ProSiteProfiles TIR domain profile. 19 186 IPR000157 GO:0007165
Arst4g03285 1067 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 449 IPR027417 -
Arst4g03285 1067 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 163 IPR035897 -
Arst4g03285 1067 Gene3D - 355 439 IPR042197 -
Arst4g03285 1067 SMART till_3 20 160 IPR000157 GO:0007165
Arst4g03285 1067 SUPERFAMILY L domain-like 499 859 - -
Arst4g03285 1067 PRINTS Disease resistance protein signature 705 721 - -
Arst4g03285 1067 PRINTS Disease resistance protein signature 220 235 - -
Arst4g03285 1067 PRINTS Disease resistance protein signature 390 404 - -
Arst4g03285 1067 PRINTS Disease resistance protein signature 296 310 - -
Arst4g03285 1067 Gene3D - 19 186 IPR035897 -
Arst4g03285 1067 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 866 IPR044974 GO:0006952
Arst4g03285 1067 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 188 - -
Arst4g03285 1067 Gene3D Ribonuclease Inhibitor 550 708 IPR032675 -
Arst4g03285 1067 Pfam C-JID domain 897 944 IPR045344 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03285 Arst-Chr4 110369231 110378411 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03285 198 857 WRKY Transcription Factor Family AT5G45050 31.517 9.56e-81 286