Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03272 ATGGGGTTCCCCGTAGGCTACACGGAAGTCCTCGTCCCAAACATCTTCCTCCGCCTCCTCACCTTCCTCGCCGCCCTCCGAAACCTCGTACTCTCCCTCTTCCGCCTCCTCGGCCTCTCTGAACTCCTCGACACTACCACCACCGACCCCTACCCTCTCTCTTGGACCCAGGCCCACCAGGCCCAATTCCGGCCCACCGCCACCACCACCACAACTACCATCCCTTCCCTCTCCGCTATCCTCATCCGCGAATTCCTCCCCGTCATGAAATTCAGCGACATAGCCGGCGCCGGAGATTTCATTCCGGCGACGATGGAGAACGGATGTGCGGTTTGCCTGAGCGAATTCTCCGGGGAAGACGAGATCAGGTGTATGGCGAACTGCAGACACGTGTTCCATCGCGGTTGCGTGGACCGTTGGATGGACCACGATCAAAGGACTTGCCCTCTCTGTAGGACTCCTTTCGTTCCCGATCACAAGGTGAACGAGTACAATCAACGCCTCTGGGAAGCTTCTGGAGTAGCGGAATTCTACGCAGATTAA 543 0.582 MGFPVGYTEVLVPNIFLRLLTFLAALRNLVLSLFRLLGLSELLDTTTTDPYPLSWTQAHQAQFRPTATTTTTTIPSLSAILIREFLPVMKFSDIAGAGDFIPATMENGCAVCLSEFSGEDEIRCMANCRHVFHRGCVDRWMDHDQRTCPLCRTPFVPDHKVNEYNQRLWEASGVAEFYAD 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03272 180 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 65 157 IPR013083 -
Arst4g03272 180 SMART ring_2 109 151 IPR001841 -
Arst4g03272 180 SUPERFAMILY RING/U-box 91 161 - -
Arst4g03272 180 PANTHER RING ZINC FINGER PROTEIN-RELATED 24 170 - -
Arst4g03272 180 ProSiteProfiles Zinc finger RING-type profile. 109 152 IPR001841 -
Arst4g03272 180 Pfam Ring finger domain 109 152 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03272 Arst-Chr4 110138529 110139485 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03272 1 175 C3H Transcription Factor Family AT1G63840 46.023 5.26e-50 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03272 K16281 - gmx:100813224 191.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g03272 4 110138529 110139485 Arst4g03272 4 110138529 110139485 ECH
Arst4g03272 4 110138529 110139485 Arst2g00208 2 1754514 1755134 PCT