Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03266 ATGATGTGTAGTGGTGAGCCTTTGGATTTGTATAAGCTATTCATGGTGGTGAAGGAGAAAGGTGGCTATGATGCTGTTTGTAAGAATATGCTGTGGGATTTGGTTGCGGAAGAATATGGTTTAGGTTTAAATGTTGGTTCATCTATTGAACTTGTTTATAGTAAGCACTTGAGTACACTAGAGACATGGCTGAAGAATGTTGCTGATAGTAAGTTCCCTGAGTGTGGTTTAATGGATGATAGGGTTAGTTTTGGTAAGAAGTTGATGGAGGTGCAGGCTGATTTCTTGTTAGATGTTTATAGCGAGGAAGGTGCAGGGGATAAAATTAAGACAGTATGTGATTTCGCAGATGGAAGGAAGTTGTGTGGAACTAATAGGGTTAGGGGATTGAATCCTGAGCTCAGCGGTGCAAAGAAAATTGTTGATTTGAATGCACTGGACCATAAGATAAATGGGCCTAGTATTGGAAGCTTTTGCAGCAATAACTTTTCAAATAATTCAAGTGATATACAGAACCATTTGAATGAAATTAAGACATCAACAGTGGACATATCTGATGAAGCAAACATAATGCCTACATTGTCGGAAGAAGGTGATAGTTGTGATAAAAATGATGGTCATGATGACGACGATGACGACGATGATGATGTGATGGTATTGGATCCATCCACTGTTAATAAAGAGAGCTTTGGTAGAAAGAGGAAGAGAGAGTCTATGTCTGAAATGCTAAGCTGGCTTACTGGTATTGCTAAGAATCCTTGTGATCCTGCAGTTGGTTCAATGCCTGAAAAGTCAAAGTGGAAGTCTTATGGTAGTGAGGAGATCTGGAAGCAGGTTTTGCTGTTTCGGCAAGCCACCTATTTTAGCAGTGATCACGTCAGTTGGCAGAAGATGCATCCTTGCATGTATGATGATCAGGTTGGGGCAAACTACAACCTTAGAGAGAGGTTGAAATCTGACAAGAATTTAACTTGTGGTGTCTCTTCAAATATGGGAGGAATACAGGGAGGTTCCGAGAGAAACCCAAGTCCTCATTCAGAAGTGGAGAAACTGTTACTTGACCAATGTAGCATGGTGCCCATTCCTGTTGGGCCATCCCATCAAGCTGAAGTGCCTGAATGGACTGGTGTGGCAATTGAAAGTGATTCCAAGTGGTTGGGAAGCCAAATATGGCCATCAGCAGAGATAAAGTCCAAAGTCATAGAAAGAGATCCTATTGGAGCAGGAAGGAAAGATTCATGTGGCTGTGAAGTACAAGGTTCTGTTGAGTGTGTCCGGTTCCACATTGCTCAGAAAAGGGCTAAAGTTAAGTTGGAATTGGGTGTGGCTTTTTATCTGTGGAATTTACACAAGACAGGCGAAGATGTTAGGCGATTGTGGACAGAAGACGATGAGAAGAAGTTCAAGGATGTGGTGAAATCAAACCCTCCTTCACTTGAAAAATGTTTTTGGGATCAAATTTTCAAATCATTTCCTACAAAGAGCAGGGAAGATTTAGTAAGTTACTACTTCAATGTCTTTATTTTGCAGCGCAGAGGATACCAAAATAGGAATACTCCGGATGACATTGACAGTGACGATGATGAATCAGAATATGGTCCATTGAAGAATGCTTTTGGACATCAAACACATAGGTCGCGCAACATCACCTTATTGTCTCCCAAAAAGCCCAAGAAAACGGAACATAGCAAGTGA 1695 0.4112 MMCSGEPLDLYKLFMVVKEKGGYDAVCKNMLWDLVAEEYGLGLNVGSSIELVYSKHLSTLETWLKNVADSKFPECGLMDDRVSFGKKLMEVQADFLLDVYSEEGAGDKIKTVCDFADGRKLCGTNRVRGLNPELSGAKKIVDLNALDHKINGPSIGSFCSNNFSNNSSDIQNHLNEIKTSTVDISDEANIMPTLSEEGDSCDKNDGHDDDDDDDDDVMVLDPSTVNKESFGRKRKRESMSEMLSWLTGIAKNPCDPAVGSMPEKSKWKSYGSEEIWKQVLLFRQATYFSSDHVSWQKMHPCMYDDQVGANYNLRERLKSDKNLTCGVSSNMGGIQGGSERNPSPHSEVEKLLLDQCSMVPIPVGPSHQAEVPEWTGVAIESDSKWLGSQIWPSAEIKSKVIERDPIGAGRKDSCGCEVQGSVECVRFHIAQKRAKVKLELGVAFYLWNLHKTGEDVRRLWTEDDEKKFKDVVKSNPPSLEKCFWDQIFKSFPTKSREDLVSYYFNVFILQRRGYQNRNTPDDIDSDDDESEYGPLKNAFGHQTHRSRNITLLSPKKPKKTEHSK 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03266 564 Gene3D - 1 73 IPR036431 GO:0003677
Arst4g03266 564 Pfam Myb-like DNA-binding domain 459 506 IPR001005 -
Arst4g03266 564 CDD ARID 4 61 - -
Arst4g03266 564 SMART bright_3 2 66 IPR001606 GO:0003677
Arst4g03266 564 MobiDBLite consensus disorder prediction 518 564 - -
Arst4g03266 564 CDD SANT 460 507 IPR001005 -
Arst4g03266 564 SMART sant 456 509 IPR001005 -
Arst4g03266 564 Pfam ARID/BRIGHT DNA binding domain 4 60 IPR001606 GO:0003677
Arst4g03266 564 SUPERFAMILY ARID-like 3 73 IPR036431 GO:0003677
Arst4g03266 564 SMART ELM2_2 361 411 IPR000949 -
Arst4g03266 564 MobiDBLite consensus disorder prediction 193 217 - -
Arst4g03266 564 ProSiteProfiles ARID domain profile. 1 65 IPR001606 GO:0003677
Arst4g03266 564 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 1 558 - -
Arst4g03266 564 MobiDBLite consensus disorder prediction 203 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03266 Arst-Chr4 110000891 110005529 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Arst4g03266 ARID 8.5e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03266 - - adu:107485800 642.884