Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03248 ATGCCTCAGCAGCCTCAAAAATTTGTTGATTTAGGTCAGCAGAGCTCCAGCCAGGGACAAGTTGCTGACCGGCAAATGCTCAATTACCAACAAGCATACCTTCAATATGCTCTGCAGGCTCAACAAAAATCTGCTTTGGCAATGCAGTCACAGAAACAATCTAAAATGGGGATCCCAGGCCCTTCATCTGTGAATGATCGGGACATGCATACTGGAAATCTGAAAATACAGGACCTTATGTCTATGCAAGCTGTTAATCAATCCCAAGCATCATCCTCTAGGAATTCATCTGAACATTTTGCTCATGGGGAAAAGCAGATGGAGCAAGGACAGCAGCTAGCATTTGATCAGAAGAGTGAAGGAAAGCCTTCATCCCAAGGACCAGCCACTGGACACTTAATGCCAGGAAATAGTATGAGGCCACCTGTGCAAGCACCACCAACGCAGCAGAGCATGCTAAATATGTTGAAGGATCCATTACCATTTACTAAGACTGCTCAATATCAGGCTATGCAGGCATGGGCAAGAAATTTATCTGATCCTTCAAGATGTCTTAAGATGGCTCAGCTCATTCCGCAGATGCAATCAAGAACAGTTCCACAACCAAAGGCAAATGATACTAATGTTGGTACTCAGTCATTACCAGTCAGTGTTTCAAACCCACAGGCTAGTTCTCCAACAGTTGCAAGTGAGAACACAACACATACTAATTCATCTAATGATGTTTCTGCACAATCAAGTTCTGCTAAAGCAAAGCAGACAGGTCCATCTAACCATTTTGGCCCACCAATTAATGCCAGTATTGCTGGAAATTCCAGTGAAGTTGCATTGCCACAATTCAATCTTCATGGCAGAGACTCGCAAGGTTCTTTGAGGCAACCAGCAGTAAAAAATGGAATGTCTTCTATGCATCCGCAGCATGCTTGTGCAAGCTTAAACCTAGGTGCAGATCATCCTTTGAATGCAAAAACTTCATCATCTAGTTCAGAACCTGTGCAGATGCAGCACATCAGGCAATCAAATCAATCTGTTGTTCAGGATGGAGGTCTGTCAAACGAAGGGGGTTCTATAAATCATTCAAAATATCAAGGGGCACCATCTCAGATGCCTCAACAAAGAACTGCATTTACGAAACAACAGCTTCATGTTCTTAAAGCTCAGATACTTGCATTTAGACGACTGAAGAAAGGAGAAGGAACTCTTCCCCAAGAACTTCTTCGGGCCATCAGTCCACCACCTCTTGATTCACAAGTGCAGCAACCGGTTACTTCTGCAGGAGGGCAAAATCAAGACCAATCAGAAGTAACTGTGGCAGAACAGCCAAAGCAGATGGAGTCCATTGCCAAGGACTCACAATCTATCTCATCTATTAATGCAAAGGGTTCTTCAAAGCAGGAAGTCTTTGCTAGAGATGAGAAATCCACAACAACAATACATGTGCAAGCTATGCCTTTGGTGATAAAAGAACCTGCTGGAAAGGAAGAGCAACAATCTGTTGGTTGCTCTGCTATGTCGGACCAGGAAGGTGAACATGGAATTAGACAAATACCTGTTAGAAATGAGTCGGTGTTAGATAGGGGAAAGGCTATTGCAGCCCAAGCTTCTGTTTCTGAACAATTGCAAAATAATAAAACTGAACAAGCAAGCATTGTTGCGCAGCCAAAGGATGTGGGCCTCACCAGAAAATATCATGGACCACTATTTGATTTTCCTTTCTTCACCAGGAAACACGATTCCTTTGGTTCATCAATGATGCTAAACCACAATAATTTGTCACTGGCATATGATGTGAAAGAGCTTCTTTATGATGAAGGTGTGCAAGTCCTTAACAAGAAAAGGACAGAAAATTTAAAGAAGATTGAGGGTTTACTGGCAGTTAACTTAGATAGGAAAAGAATTAGGCCAGATCTTGTGTTGAAGTTGCAAATTGAAGAAAAAAAGCTTCGCCTTTTAGATCTACAGGCACGTTTAAGGGATGAGATTGATCAACATCAAAAAGAGATAATGGCAATGCCAGATAGGCCATATAGGAAATTTGTTAAGTTGTGCGAACGTCAGCGTATGGAACTTGCTAGACAAGTGCAGGCATCACAGAAAGCTTTAAGGGAGAAGCAACTGAAATCTATATTCAATTGGCGCAAGAAGCTTCTTGAAGCACACTGGGGCATTCGTGACGCACGGACTGCTCGCAACCGGGGGGTGGCCAAGTATCACGAGAAGATGTTGAGAGAATTCTCGAAACGTAAGGATGATGACAGGAGCAAAAGGATGGAAGCCTTAAAAAACAATGATGTTGATAGGTACAGGGAGATGTTGCTGGAGCAGCAGATTAGTATCCCGGGTGATGCTGCAGAGAGATATGCTGTTCTTTCAACTTTCTTAACCCAGACTGAAGAATATCTACATAAATTAGGAAGTAAGATAACAGCTGCTAAGAGCCAACAGGAAGTGGAGGAGGCAGCAAAAGCTGCTGCAGCTGCTGCACGATTGCAGGGTCTTTGTGAAGAAGAAGTCAGAGTCGCAGCAACTTGTGCTGGAGAGGAAGTGATGATTAGAAATCAGTTTATAGAGATGAATACTCCTAGAGACAGTTCATCTGTCAACAAGTATTACAGCCTTGCTCATGCTGTGAGTGAAAGGGTTGTAAGACAACCATCCATGTTACGAGCTGGAACATTGAGAGACTATCAAATGGTTGGTTTGCAATGGATGCTTTCTTTGTATAACAACAAATTAAATGGAATATTGGCAGATGAGATGGGTCTTGGTAAAACCGTTCAGGTCATGGCATTAATTGCGTACTTGATGGAATTTAAAGGGAACTATGGCCCACATCTTATAATAGTGCCAAATGCTGTTTTGGTTAACTGGAAGAGTGAGTTGCATACTTGGTTACCATCCGTGTCATGCATTTTTTATGTTGGAACAAAGGATACAAGATCAAAATTATTTTCTCAGGAGGTTATGGCTATGAAATTTAATGTCCTTGTGACTACTTATGAGTTCATCATGTATGACCGGTCAAAGCTTTCAAAAGTTGATTGGAAGTATATCGTAATTGATGAAGCACAGAGAATGAAGGATAGGGATTCAGTTCTAGCACGCGATCTTGACAGATACCGTTGTCAACGACGCTTGCTTCTGACAGGAACACCTTTGCAGAATGATTTGAAGGAACTCTGGTCACTTTTAAATTTACTTCTTCCAGAGGTTTTTGACAATAAGAAAGCCTTCCATGATTGGTTTTCAAAACCATTTCAAAAGGAAGGTCCAAATCAGAATGCAGAGGATGACTGGCTTGAAACAGAAAAGAAAGTCATCATTATCCATCGACTCCATCAGATTCTTGAGCCTTTCATGCTTAGGCGTCGCGTTGAAGATGTTGAAGGCTCTCTACCACCAAAGGTCTCCATAGTTTTACGATGTAAAATGTCAGCTGTCCAGAGTGCCATTTATGACTGGGTTAAATCCACTGGCACCCTTCGTGTTGATCCTGAGGATGAGAGAAGAAAGGTTTTGAAGAATCCACTCTACCAGGCAAAGCCTTATAAAACTTTAAATAACAGATGCATGGAGCTACGCAAAACCTGCAATCATCCAATGCTTAATTACCCATTTTTTGATGAATTTATGGATAGAGACTTTATTGTACAATCTTGTGGGAAGTTGTGGATTTTGGATAGGATCCTTATCAAACTTCAAAGGACTGGACATCGAGTTCTGCTGTTTAGTACCATGACAAAGCTCCTAGACATCTTGGAAGACTATCTGCAATGGCGGAGACTAGTTTACAGGAGAATTGATGGGACAACAAGTTTGGAAGACCGAGAATCAGCAATAATGGACTTCAATAGGCCTGATTCAGACTGTTTCATCTTCTTGCTTAGCATTAGAGCTGCTGGGAGAGGCCTTAATCTTCAGTCTGCTGACACAGTTGTCATTTACGATCCTGATCCAAATCCTAAAAATGAGGAGCAGGCTGTGGCCAGAGCTCATCGGATTGGACAAAAAAGGGAAGTCAAGGTTATCTACATGGAGGCTGTTGTTGACAAGATCTCTAGCCATCAGAAAGAGAACGAATTGAGAAGTGGAGGCCTTGTTGATATGGAGGATGAACTTGCTGGTAAGGATCGATATATGGGATCTATTGAGAGCCTCATAAGGAACAATATTCAACAATATAAGATAGACATGGCTGACGAGGTCATTAATGCTGGACGTTTTGATCAAAGAACAACACATGAAGAAAGACGTTCAACTTTGGAGACTTTATTACATGACGAGGAAAGATATCAAGAAACTGTTCATAATGTTCCGTCACTACAGGAGGTTAATCGCATGATTGCTAGAAGTGAAGAGGAAGTTGAACTGTTTGATCAAATGGACGAAGAACTGGATTGGAGTGAAGAGATGACACGGCATGATGAGGTGCCTAAATGGCTTCGAACCAGCACAAGAGAAGTGAATGCTGCTATTGCTGCTTTATCTAAAAGACCATCAAAGAACATTTTATTTGGTGGCAGTATGGGCGTGGAATCTAGTGAATTGGGTTCTGAAAAGAGAAGAGGACGACCCAAGGGAAAAAAGCTTCCTAATTATAAAGAGTTGGAGGATGATGATATAATTGAGTGCTCTGAAGAAAGCTCTGAGGAAAGAAATGGATATTCTGCACATGAAGAAGGGGAGATAGGAAAATTTGAAGATGAAGTACATAGTGGGGGTGATGGAGCTAATCTCATGGAAAAAGATCAAGTCGAACATGGTCCACCTTTTAATGCTGGATATGAACTTCCTCGGTCTTTAGAAAATGCTAAAAATCACACAGTTGAAGAAGCTGGTACGAGAGGATCATCATTAGATAGTCAAATATTGACACATACAGTGACACCATCAGTTTACTCACGGAAATTTGGTTCCCTCTCTGCATTAGATGCCAAGCCAAGTTCCATTTCAAAAAGGGTAGATGAGTTAGAAGAAGGGGAAATTGCAATATCTGGTGGTTCTCACATGGATCATCAACAATGTAGAAGTTGGATTCATGATCGTGATGAAGGTGAGGATGAACAAGTTCTGCAGCAACCCAAGATCAAACGCAAACGTAGTCTACGTGTTCGACACCGTCCTGTCATCGAAAGGCCTGAGGACAAATCTGGCATTGAGATGGTTCCTCTTCAACGTGGAGAATCATCTCTTATTGCAGACAATAAATATCAAGGTCAAACAAGGACTGACCGAGAATCAAAATCACTTGTTGACAATAATGCCAGCAAGCATGATAAGGATGAATCTTCATTGGAAAATAAGCAAAATTTACCTTCAAGGAAAGCAGCTAATTCATTCAAATTACATGGCTCACCTAAGTCTAATCGTATGATCTGCTTGTCTGCTCCTTCAGAGGATGGTGGTGAACACCCTAAAGAAAGTTGGGAAGGAAAGCCTATCAACTCAGCTGGATCTTCAGCTCATGGCTCTAAGATGACCGAAATTATTCAGAGAAGATGCAAAAATGTAATTAGCAAATTCCAAAGGAGAATAGACAAGGAAGGCCAACAAATTGTACCTTTGCTATCAGATTTGTGGAAGATGGAGAATTCTGGGTACACTGGCGGATCAGGGAACAGTTTGTTGGATCTACGAAAGATTGAGCAGCAGATTGATGCATTGGAGTATAATGGAGTAATGGAGCTTGTGTTTGATGTGCAGTTTATGTTGAGGAGTGCGATGCAATTTTATGGATACTCATATGAGGTAAGAACTGAAGCAAGGAAGGTTCATGATCTCTTTTTTGATATTTTGAAAATTGCATTTCCCGATACGGACTTTGCAGAAGCAAAAGGTTCCCTTTCTTTCTCCGGCCAAATTGATTCCAATGCCATAACATCCCCTAGGCAAGGAAATGTTTGCCCAAGCAAGAGGCAAAGGACAATAAATGATGTGGAAACCGATCAATGCCCTGAACAAAAGGCTCCGAACCGTGGTTCCGGGTCTAACAGCGAAAAAGCCAGGAACAAAGGCCATCCATTGCAGAAGGAATTGAGACCTGGAAGCGGTAGTGGTAGTGCCCGGGAGCAATATCAGCAGAATAATTCTTCTGCATTAGTTCATCCAGGTGATCTGGTTGTATGCAAGAAGAAAAGAAATGACAGAGAAAAATTATTGGCGAAGCCTAGGACCACATCCGCCGGTCCTGTTTCACCACCCAGTATGGGTAAGAATAGAAGTCCTGGGTCAGGTTCGACTCCCAAGGATGCGAGGGTGTTTCAACATACTTCAAATGTGCAAGGGCGGTTTAGCCAGCCATATCAGCTGTCAAATGGGTCTGGTGGGTTAGTTGGCTGGGCAAACCCGGTAAAGCGACTAAGAACAGATTGTGGGAAGAGGAGACCAAGCCATACATAG 6399 0.421 MPQQPQKFVDLGQQSSSQGQVADRQMLNYQQAYLQYALQAQQKSALAMQSQKQSKMGIPGPSSVNDRDMHTGNLKIQDLMSMQAVNQSQASSSRNSSEHFAHGEKQMEQGQQLAFDQKSEGKPSSQGPATGHLMPGNSMRPPVQAPPTQQSMLNMLKDPLPFTKTAQYQAMQAWARNLSDPSRCLKMAQLIPQMQSRTVPQPKANDTNVGTQSLPVSVSNPQASSPTVASENTTHTNSSNDVSAQSSSAKAKQTGPSNHFGPPINASIAGNSSEVALPQFNLHGRDSQGSLRQPAVKNGMSSMHPQHACASLNLGADHPLNAKTSSSSSEPVQMQHIRQSNQSVVQDGGLSNEGGSINHSKYQGAPSQMPQQRTAFTKQQLHVLKAQILAFRRLKKGEGTLPQELLRAISPPPLDSQVQQPVTSAGGQNQDQSEVTVAEQPKQMESIAKDSQSISSINAKGSSKQEVFARDEKSTTTIHVQAMPLVIKEPAGKEEQQSVGCSAMSDQEGEHGIRQIPVRNESVLDRGKAIAAQASVSEQLQNNKTEQASIVAQPKDVGLTRKYHGPLFDFPFFTRKHDSFGSSMMLNHNNLSLAYDVKELLYDEGVQVLNKKRTENLKKIEGLLAVNLDRKRIRPDLVLKLQIEEKKLRLLDLQARLRDEIDQHQKEIMAMPDRPYRKFVKLCERQRMELARQVQASQKALREKQLKSIFNWRKKLLEAHWGIRDARTARNRGVAKYHEKMLREFSKRKDDDRSKRMEALKNNDVDRYREMLLEQQISIPGDAAERYAVLSTFLTQTEEYLHKLGSKITAAKSQQEVEEAAKAAAAAARLQGLCEEEVRVAATCAGEEVMIRNQFIEMNTPRDSSSVNKYYSLAHAVSERVVRQPSMLRAGTLRDYQMVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHTWLPSVSCIFYVGTKDTRSKLFSQEVMAMKFNVLVTTYEFIMYDRSKLSKVDWKYIVIDEAQRMKDRDSVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNKKAFHDWFSKPFQKEGPNQNAEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCKMSAVQSAIYDWVKSTGTLRVDPEDERRKVLKNPLYQAKPYKTLNNRCMELRKTCNHPMLNYPFFDEFMDRDFIVQSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEDYLQWRRLVYRRIDGTTSLEDRESAIMDFNRPDSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEAVVDKISSHQKENELRSGGLVDMEDELAGKDRYMGSIESLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRSTLETLLHDEERYQETVHNVPSLQEVNRMIARSEEEVELFDQMDEELDWSEEMTRHDEVPKWLRTSTREVNAAIAALSKRPSKNILFGGSMGVESSELGSEKRRGRPKGKKLPNYKELEDDDIIECSEESSEERNGYSAHEEGEIGKFEDEVHSGGDGANLMEKDQVEHGPPFNAGYELPRSLENAKNHTVEEAGTRGSSLDSQILTHTVTPSVYSRKFGSLSALDAKPSSISKRVDELEEGEIAISGGSHMDHQQCRSWIHDRDEGEDEQVLQQPKIKRKRSLRVRHRPVIERPEDKSGIEMVPLQRGESSLIADNKYQGQTRTDRESKSLVDNNASKHDKDESSLENKQNLPSRKAANSFKLHGSPKSNRMICLSAPSEDGGEHPKESWEGKPINSAGSSAHGSKMTEIIQRRCKNVISKFQRRIDKEGQQIVPLLSDLWKMENSGYTGGSGNSLLDLRKIEQQIDALEYNGVMELVFDVQFMLRSAMQFYGYSYEVRTEARKVHDLFFDILKIAFPDTDFAEAKGSLSFSGQIDSNAITSPRQGNVCPSKRQRTINDVETDQCPEQKAPNRGSGSNSEKARNKGHPLQKELRPGSGSGSAREQYQQNNSSALVHPGDLVVCKKKRNDREKLLAKPRTTSAGPVSPPSMGKNRSPGSGSTPKDARVFQHTSNVQGRFSQPYQLSNGSGGLVGWANPVKRLRTDCGKRRPSHT 2132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03248 2132 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1225 1402 IPR001650 -
Arst4g03248 2132 MobiDBLite consensus disorder prediction 1739 1768 - -
Arst4g03248 2132 SMART bromo_6 1827 1937 IPR001487 GO:0005515
Arst4g03248 2132 SMART helicmild6 1251 1335 IPR001650 -
Arst4g03248 2132 MobiDBLite consensus disorder prediction 1506 1533 - -
Arst4g03248 2132 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1127 1465 IPR027417 -
Arst4g03248 2132 FunFam ATP-dependent helicase BRM 884 1132 - -
Arst4g03248 2132 Gene3D - 1825 1954 IPR036427 GO:0005515
Arst4g03248 2132 Pfam SNF2-related domain 896 1201 IPR000330 GO:0005524|GO:0140658
Arst4g03248 2132 Gene3D - 884 1132 IPR038718 -
Arst4g03248 2132 MobiDBLite consensus disorder prediction 2039 2055 - -
Arst4g03248 2132 MobiDBLite consensus disorder prediction 1952 2114 - -
Arst4g03248 2132 MobiDBLite consensus disorder prediction 1681 1695 - -
Arst4g03248 2132 MobiDBLite consensus disorder prediction 195 269 - -
Arst4g03248 2132 MobiDBLite consensus disorder prediction 409 472 - -
Arst4g03248 2132 SUPERFAMILY Bromodomain 1876 1935 IPR036427 GO:0005515
Arst4g03248 2132 Pfam QLQ 375 409 IPR014978 GO:0005524|GO:0005634|GO:0006355
Arst4g03248 2132 MobiDBLite consensus disorder prediction 413 463 - -
Arst4g03248 2132 Gene3D - 1133 1344 IPR027417 -
Arst4g03248 2132 ProSiteProfiles QLQ domain profile. 375 411 IPR014978 GO:0005524|GO:0005634|GO:0006355
Arst4g03248 2132 MobiDBLite consensus disorder prediction 1707 1721 - -
Arst4g03248 2132 FunFam ATP-dependent helicase BRM 1133 1344 - -
Arst4g03248 2132 SMART ultradead3 889 1078 IPR014001 -
Arst4g03248 2132 CDD SF2_C_SNF 1220 1345 - -
Arst4g03248 2132 MobiDBLite consensus disorder prediction 2019 2034 - -
Arst4g03248 2132 PANTHER SNF2/RAD54 HELICASE FAMILY 629 1545 - -
Arst4g03248 2132 MobiDBLite consensus disorder prediction 1982 2002 - -
Arst4g03248 2132 MobiDBLite consensus disorder prediction 84 149 - -
Arst4g03248 2132 MobiDBLite consensus disorder prediction 1 22 - -
Arst4g03248 2132 MobiDBLite consensus disorder prediction 110 132 - -
Arst4g03248 2132 FunFam Brahma1 1825 1947 - -
Arst4g03248 2132 MobiDBLite consensus disorder prediction 1952 1974 - -
Arst4g03248 2132 Coils Coil 1441 1461 - -
Arst4g03248 2132 MobiDBLite consensus disorder prediction 1681 1825 - -
Arst4g03248 2132 Pfam Helicase conserved C-terminal domain 1224 1335 IPR001650 -
Arst4g03248 2132 Coils Coil 643 667 - -
Arst4g03248 2132 MobiDBLite consensus disorder prediction 43 69 - -
Arst4g03248 2132 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 905 1070 IPR014001 -
Arst4g03248 2132 Gene3D - 695 768 - -
Arst4g03248 2132 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 876 1123 IPR027417 -
Arst4g03248 2132 MobiDBLite consensus disorder prediction 2061 2109 - -
Arst4g03248 2132 SMART QLQ_2 374 411 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03248 Arst-Chr4 109537271 109547759 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03248 875 1376 RAD5 or RAD16-like Gene Family AT1G02670 25.610 5.72e-28 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Arst4g03248 SNF2_N 2e-66 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03248 K11647 - gmx:100811608 3123.57