Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03246 ATGCCGTTTTCCTTTCAGTCATTTCCACATCAATTGCTAAAAAAACCAGAAGGAAGTGAAGCATTTTTTGCATATCAAACAGGGCTTCAAGGTGGATTTGGGACTAACAATTTCTCACCTTCTAATGCCATGCCTCAGCAGCCTCAAAAATTTGTTGATTTAGGTCAGCAGAGCTCCAGCCAGGGACAAGTTGCTGACCGGCAAATGCTCAATTACCAACAAGCATACCTTCAATATGCTCTGCAGGCTCAACAAAAATCTGCTTTGGCAATGCAGTCACAGAAACAATCTAAAATGGGGATCCCAGGCCCTTCATCTGTGAATGATCGGGACATGCATACTGGAAATCTGAAAATACAGGACCTTATGTCTATGCAAGCTGTTAATCAATCCCAAGCATCATCCTCTAGGAATTCATCTGAACATTTTGCTCATGGGGAAAAGCAGATGGAGCAAGGACAGCAGCTAGCATTTGATCAGAAGAGTGAAGGAAAGCCTTCATCCCAAGGACCAGCCACTGGACACTTAATGCCAGGAAATAGTATGAGGCCACCTGTGCAAGCACCACCAACGCAGCAGAGCATGCTAAATATGTTGAAGGATCCATTACCATTTACTAAGACTGCTCAATATCAGGCTATGCAGGCATGGGCAAGAAATTTATCTGATCCTTCAAGATGTCTTAAGATGGCTCAGCTCATTCCGCAGATGCAATCAAGAACAGTTCCACAACCAAAGGCAAATGATACTAATGTTGGTACTCAGTCATTACCAGTCAGTGTTTCAAACCCACAGGCTAGTTCTCCAACAGTTGCAAGTGAGAACACAACACATACTAATTCATCTAATGATGTTTCTGCACAATCAAGTTCTGCTAAAGCAAAGCAGACAGGTCCATCTAACCATTTTGGCCCACCAATTAATGCCAGTATTGCTGGAAATTCCAGTGAAGTTGCATTGCCACAATTCAATCTTCATGGCAGAGACTCGCAAGGTTCTTTGAGGCAACCAGCAGTAAAAAATGGAATGTCTTCTATGCATCCGCAGCATGCTTGTGCAAGCTTAAACCTAGGTGCAGATCATCCTTTGAATGCAAAAACTTCATCATCTAGTTCAGAACCTGTGCAGATGCAGCACATCAGGCAATCAAATCAATCTGTTGTTCAGGATGGAGGTCTGTCAAACGAAGGGGGTTCTATAAATCATTCAAAATATCAAGGGGCACCATCTCAGATGCCTCAACAAAGAACTGCATTTACGAAACAACAGCTTCATGTTCTTAAAGCTCAGATACTTGCATTTAGACGACTGAAGAAAGGAGAAGGAACTCTTCCCCAAGAACTTCTTCGGGCCATCAGTCCACCACCTCTTGATTCACAAGTGCAGCAACCGGTTACTTCTGCAGGAGGGCAAAATCAAGACCAATCAGAAGTAACTGTGGCAGAACAGCCAAAGCAGATGGAGTCCATTGCCAAGGACTCACAATCTATCTCATCTATTAATGCAAAGGGTTCTTCAAAGCAGGAAGTCTTTGCTAGAGATGAGAAATCCACAACAACAATACATGTGCAAGCTATGCCTTTGGTGATAAAAGAACCTGCTGGAAAGGAAGAGCAACAATCTGTTGGTTGCTCTGCTATGTCGGACCAGGAAGGTGAACATGGAATTAGACAAATACCTGTTAGAAATGAGTCGGTGTTAGATAGGGGAAAGGCTATTGCAGCCCAAGCTTCTGTTTCTGAACAATTGCAAAATAATAAAACTGAACAAGCAAGCATTGTTGCGCAGCCAAAGGATGTGGGCCTCACCAGAAAATATCATGGACCACTATTTGATTTTCCTTTCTTCACCAGGAAACACGATTCCTTTGGTTCATCAATGATGCTAAACCACAATAATTTGTCACTGGCATATGATGTGAAAGAGCTTCTTTATGATGAAGGTGTGCAAGTCCTTAACAAGAAAAGGACAGAAAATTTAAAGAAGATTGAGGGTTTACTGGCAGTTAACTTAGATAGGAAAAGAATTAGGCCAGATCTTGTGTTGAAGTTGCAAATTGAAGAAAAAAAGCTTCGCCTTTTAGATCTACAGGCACGTTTAAGGGATGAGATTGATCAACATCAAAAAGAGATAATGGCAATGCCAGATAGGCCATATAGGAAATTTGTTAAGTTGTGCGAACGTCAGCGTATGGAACTTGCTAGACAAGTGCAGGCATCACAGAAAGCTTTAAGGGAGAAGCAACTGAAATCTATATTCAATTGGCGCAAGAAGCTTCTTGAAGCACACTGGGGCATTCGTGACGCACGGACTGCTCGCAACCGGGGGGTGGCCAAGTATCACGAGAAGATGTTGAGAGAATTCTCGAAACGTAAGGATGATGACAGGAGCAAAAGGATGGAAGCCTTAAAAAACAATGATGTTGATAGGTACAGGGAGATGTTGCTGGAGCAGCAGATTAGTATCCCGGGTGATGCTGCAGAGAGATATGCTGTTCTTTCAACTTTCTTAACCCAGACTGAAGAATATCTACATAAATTAGGAAGTAAGATAACAGCTGCTAAGAGCCAACAGGAAGTGGAGGAGGCAGCAAAAGCTGCTGCAGCTGCTGCACGATTGCAGGGTCTTTGTGAAGAAGAAGTCAGAGTCGCAGCAACTTGTGCTGGAGAGGAAGTGATGATTAGAAATCAGTTTATAGAGATGAATACTCCTAGAGACAGTTCATCTGTCAACAAGTATTACAGCCTTGCTCATGCTGTGAGTGAAAGGGTTGTAAGACAACCATCCATGTTACGAGCTGGAACATTGAGAGACTATCAAATGGTTGGTTTGCAATGGATGCTTTCTTTGTATAACAACAAATTAAATGGAATATTGGCAGATGAGATGGGTCTTGGTAAAACCGTTCAGGTCATGGCATTAATTGCGTACTTGATGGAATTTAAAGGGAACTATGGCCCACATCTTATAATAGTGCCAAATGCTGTTTTGGTTAACTGGAAGAGTGAGTTGCATACTTGGTTACCATCCGTGTCATGCATTTTTTATGTTGGAACAAAGGATACAAGATCAAAATTATTTTCTCAGGAGGTTATGGCTATGAAATTTAATGTCCTTGTGACTACTTATGAGTTCATCATGTATGACCGGTCAAAGCTTTCAAAAGTTGATTGGAAGTATATCGTAATTGATGAAGCACAGAGAATGAAGGATAGGGATTCAGTTCTAGCACGCGATCTTGACAGATACCGTTGTCAACGACGCTTGCTTCTGACAGGAACACCTTTGCAGAATGATTTGAAGGAACTCTGGTCACTTTTAAATTTACTTCTTCCAGAGGTTTTTGACAATAAGAAAGCCTTCCATGATTGGTTTTCAAAACCATTTCAAAAGGAAGGTCCAAATCAGAATGCAGAGGATGACTGGCTTGAAACAGAAAAGAAAGTCATCATTATCCATCGACTCCATCAGATTCTTGAGCCTTTCATGCTTAGGCGTCGCGTTGAAGATGTTGAAGGCTCTCTACCACCAAAGGTCTCCATAGTTTTACGATGTAAAATGTCAGCTGTCCAGAGTGCCATTTATGACTGGGTTAAATCCACTGGCACCCTTCGTGTTGATCCTGAGGATGAGAGAAGAAAGGTTTTGAAGAATCCACTCTACCAGGCAAAGCCTTATAAAACTTTAAATAACAGATGCATGGAGCTACGCAAAACCTGCAATCATCCAATGCTTAATTACCCATTTTTTGATGAATTTATGGATAGAGACTTTATTGTACAATCTTGTGGGAAGTTGTGGATTTTGGATAGGATCCTTATCAAACTTCAAAGGACTGGACATCGAGTTCTGCTGTTTAGTACCATGACAAAGCTCCTAGACATCTTGGAAGACTATCTGCAATGGCGGAGACTAGTTTACAGGAGAATTGATGGGACAACAAGTTTGGAAGACCGAGAATCAGCAATAATGGACTTCAATAGGCCTGATTCAGACTGTTTCATCTTCTTGCTTAGCATTAGAGCTGCTGGGAGAGGCCTTAATCTTCAGTCTGCTGACACAGTTGTCATTTACGATCCTGATCCAAATCCTAAAAATGAGGAGCAGGCTGTGGCCAGAGCTCATCGGATTGGACAAAAAAGGGAAGTCAAGGTTATCTACATGGAGGCTGTTGTTGACAAGATCTCTAGCCATCAGAAAGAGAACGAATTGAGAAGTGGAGGCCTTGTTGATATGGAGGATGAACTTGCTGGTAAGGATCGATATATGGGATCTATTGAGAGCCTCATAAGGAACAATATTCAACAATATAAGATAGACATGGCTGACGAGGTCATTAATGCTGGACGTTTTGATCAAAGAACAACACATGAAGAAAGACGTTCAACTTTGGAGACTTTATTACATGACGAGGAAAGATATCAAGAAACTGTTCATAATGTTCCGTCACTACAGGAGGTTAATCGCATGATTGCTAGAAGTGAAGAGGAAGTTGAACTGTTTGATCAAATGGACGAAGAACTGGATTGGAGTGAAGAGATGACACGGCATGATGAGGTGCCTAAATGGCTTCGAACCAGCACAAGAGAAGTGAATGCTGCTATTGCTGCTTTATCTAAAAGACCATCAAAGAACATTTTATTTGGTGGCAGTATGGGCGTGGAATCTAGTGAATTGGGTTCTGAAAAGAGAAGAGGACGACCCAAGGGAAAAAAGCTTCCTAATTATAAAGAGTTGGAGGATGATGATATAATTGAGTGCTCTGAAGAAAGCTCTGAGGAAAGAAATGGATATTCTGCACATGAAGAAGGGGAGATAGGAAAATTTGAAGATGAAGTACATAGTGGGGGTGATGGAGCTAATCTCATGGAAAAAGATCAAGTCGAACATGGTCCACCTTTTAATGCTGGATATGAACTTCCTCGGTCTTTAGAAAATGCTAAAAATCACACAGTTGAAGAAGCTGGTACGAGAGGATCATCATTAGATAGTCAAATATTGACACATACAGTGACACCATCAGTTTACTCACGGAAATTTGGTTCCCTCTCTGCATTAGATGCCAAGCCAAGTTCCATTTCAAAAAGGGTAGATGAGTTAGAAGAAGGGGAAATTGCAATATCTGGTGGTTCTCACATGGATCATCAACAATGTAGAAGTTGGATTCATGATCGTGATGAAGGTGAGGATGAACAAGTTCTGCAGCAACCCAAGATCAAACGCAAACGTAGTCTACGTGTTCGACACCGTCCTGTCATCGAAAGGCCTGAGGACAAATCTGGCATTGAGATGGTTCCTCTTCAACGTGGAGAATCATCTCTTATTGCAGACAATAAATATCAAGGTCAAACAAGGACTGACCGAGAATCAAAATCACTTGTTGACAATAATGCCAGCAAGCATGATAAGGATGAATCTTCATTGGAAAATAAGCAAAATTTACCTTCAAGGAAAGCAGCTAATTCATTCAAATTACATGGCTCACCTAAGTCTAATCGTATGATCTGCTTGTCTGCTCCTTCAGAGGATGGTGGTGAACACCCTAAAGAAAGTTGGGAAGGAAAGCCTATCAACTCAGCTGGATCTTCAGCTCATGGCTCTAAGATGACCGAAATTATTCAGAGAAGATGCAAAAATGTAATTAGCAAATTCCAAAGGAGAATAGACAAGGAAGGCCAACAAATTGTACCTTTGCTATCAGATTTGTGGAAGATGGAGAATTCTGGGTACACTGGCGGATCAGGGAACAGTTTGTTGGATCTACGAAAGATTGAGCAGCAGATTGATGCATTGGAGTATAATGGAGTAATGGAGCTTGTGTTTGATGTGCAGTTTATGTTGAGGAGTGCGATGCAATTTTATGGATACTCATATGAGGTAAGAACTGAAGCAAGGAAGGTTCATGATCTCTTTTTTGATATTTTGAAAATTGCATTTCCCGATACGGACTTTGCAGAAGCAAAAGGTTCCCTTTCTTTCTCCGGCCAAATTGATTCCAATGCCATAACATCCCCTAGGCAAGGAAATGTTTGCCCAAGCAAGAGGCAAAGGACAATAAATGATGTGGAAACCGATCAATGCCCTGAACAAAAGGCTCCGAACCGTGGTTCCGGGTCTAACAGCGAAAAAGCCAGGAACAAAGGCCATCCATTGCAGAAGGAATTGAGACCTGGAAGCGGTAGTGGTAGTGCCCGGGAGCAATATCAGCAGAATAATTCTTCTGCATTAGTTCATCCAGGTGATCTGGTTGTATGCAAGAAGAAAAGAAATGACAGAGAAAAATTATTGGCGAAGCCTAGGACCACATCCGCCGGTCCTGTTTCACCACCCAGTATGGGTAAGAATAGAAGTCCTGGGTCAGGTTCGACTCCCAAGGATGCGAGGGTGTTTCAACATACTTCAAATGTGCAAGGGCGGTTTAGCCAGCCATATCAGCTGTCAAATGGGTCTGGTGGGTTAGTTGGCTGGGCAAACCCGGTAAAGCGACTAAGAACAGATTGTGGGAAGAGGAGACCAAGCCATACATAG 6528 0.4203 MPFSFQSFPHQLLKKPEGSEAFFAYQTGLQGGFGTNNFSPSNAMPQQPQKFVDLGQQSSSQGQVADRQMLNYQQAYLQYALQAQQKSALAMQSQKQSKMGIPGPSSVNDRDMHTGNLKIQDLMSMQAVNQSQASSSRNSSEHFAHGEKQMEQGQQLAFDQKSEGKPSSQGPATGHLMPGNSMRPPVQAPPTQQSMLNMLKDPLPFTKTAQYQAMQAWARNLSDPSRCLKMAQLIPQMQSRTVPQPKANDTNVGTQSLPVSVSNPQASSPTVASENTTHTNSSNDVSAQSSSAKAKQTGPSNHFGPPINASIAGNSSEVALPQFNLHGRDSQGSLRQPAVKNGMSSMHPQHACASLNLGADHPLNAKTSSSSSEPVQMQHIRQSNQSVVQDGGLSNEGGSINHSKYQGAPSQMPQQRTAFTKQQLHVLKAQILAFRRLKKGEGTLPQELLRAISPPPLDSQVQQPVTSAGGQNQDQSEVTVAEQPKQMESIAKDSQSISSINAKGSSKQEVFARDEKSTTTIHVQAMPLVIKEPAGKEEQQSVGCSAMSDQEGEHGIRQIPVRNESVLDRGKAIAAQASVSEQLQNNKTEQASIVAQPKDVGLTRKYHGPLFDFPFFTRKHDSFGSSMMLNHNNLSLAYDVKELLYDEGVQVLNKKRTENLKKIEGLLAVNLDRKRIRPDLVLKLQIEEKKLRLLDLQARLRDEIDQHQKEIMAMPDRPYRKFVKLCERQRMELARQVQASQKALREKQLKSIFNWRKKLLEAHWGIRDARTARNRGVAKYHEKMLREFSKRKDDDRSKRMEALKNNDVDRYREMLLEQQISIPGDAAERYAVLSTFLTQTEEYLHKLGSKITAAKSQQEVEEAAKAAAAAARLQGLCEEEVRVAATCAGEEVMIRNQFIEMNTPRDSSSVNKYYSLAHAVSERVVRQPSMLRAGTLRDYQMVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHTWLPSVSCIFYVGTKDTRSKLFSQEVMAMKFNVLVTTYEFIMYDRSKLSKVDWKYIVIDEAQRMKDRDSVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNKKAFHDWFSKPFQKEGPNQNAEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCKMSAVQSAIYDWVKSTGTLRVDPEDERRKVLKNPLYQAKPYKTLNNRCMELRKTCNHPMLNYPFFDEFMDRDFIVQSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEDYLQWRRLVYRRIDGTTSLEDRESAIMDFNRPDSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEAVVDKISSHQKENELRSGGLVDMEDELAGKDRYMGSIESLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRSTLETLLHDEERYQETVHNVPSLQEVNRMIARSEEEVELFDQMDEELDWSEEMTRHDEVPKWLRTSTREVNAAIAALSKRPSKNILFGGSMGVESSELGSEKRRGRPKGKKLPNYKELEDDDIIECSEESSEERNGYSAHEEGEIGKFEDEVHSGGDGANLMEKDQVEHGPPFNAGYELPRSLENAKNHTVEEAGTRGSSLDSQILTHTVTPSVYSRKFGSLSALDAKPSSISKRVDELEEGEIAISGGSHMDHQQCRSWIHDRDEGEDEQVLQQPKIKRKRSLRVRHRPVIERPEDKSGIEMVPLQRGESSLIADNKYQGQTRTDRESKSLVDNNASKHDKDESSLENKQNLPSRKAANSFKLHGSPKSNRMICLSAPSEDGGEHPKESWEGKPINSAGSSAHGSKMTEIIQRRCKNVISKFQRRIDKEGQQIVPLLSDLWKMENSGYTGGSGNSLLDLRKIEQQIDALEYNGVMELVFDVQFMLRSAMQFYGYSYEVRTEARKVHDLFFDILKIAFPDTDFAEAKGSLSFSGQIDSNAITSPRQGNVCPSKRQRTINDVETDQCPEQKAPNRGSGSNSEKARNKGHPLQKELRPGSGSGSAREQYQQNNSSALVHPGDLVVCKKKRNDREKLLAKPRTTSAGPVSPPSMGKNRSPGSGSTPKDARVFQHTSNVQGRFSQPYQLSNGSGGLVGWANPVKRLRTDCGKRRPSHT 2175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03246 2175 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 919 1166 IPR027417 -
Arst4g03246 2175 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 948 1113 IPR014001 -
Arst4g03246 2175 SMART ultradead3 932 1121 IPR014001 -
Arst4g03246 2175 MobiDBLite consensus disorder prediction 2104 2152 - -
Arst4g03246 2175 PANTHER SNF2/RAD54 HELICASE FAMILY 672 1714 - -
Arst4g03246 2175 Gene3D - 1176 1387 IPR027417 -
Arst4g03246 2175 MobiDBLite consensus disorder prediction 1750 1764 - -
Arst4g03246 2175 Pfam QLQ 418 452 IPR014978 GO:0005524|GO:0005634|GO:0006355
Arst4g03246 2175 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1170 1508 IPR027417 -
Arst4g03246 2175 Gene3D - 927 1175 IPR038718 -
Arst4g03246 2175 MobiDBLite consensus disorder prediction 153 175 - -
Arst4g03246 2175 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1268 1445 IPR001650 -
Arst4g03246 2175 SMART bromo_6 1870 1980 IPR001487 GO:0005515
Arst4g03246 2175 MobiDBLite consensus disorder prediction 1724 1868 - -
Arst4g03246 2175 MobiDBLite consensus disorder prediction 2082 2098 - -
Arst4g03246 2175 MobiDBLite consensus disorder prediction 127 192 - -
Arst4g03246 2175 SMART helicmild6 1294 1378 IPR001650 -
Arst4g03246 2175 MobiDBLite consensus disorder prediction 456 506 - -
Arst4g03246 2175 MobiDBLite consensus disorder prediction 1782 1811 - -
Arst4g03246 2175 MobiDBLite consensus disorder prediction 1995 2157 - -
Arst4g03246 2175 ProSiteProfiles QLQ domain profile. 418 454 IPR014978 GO:0005524|GO:0005634|GO:0006355
Arst4g03246 2175 FunFam ATP-dependent helicase BRM 927 1175 - -
Arst4g03246 2175 SMART QLQ_2 417 454 IPR014978 GO:0005524|GO:0005634|GO:0006355
Arst4g03246 2175 MobiDBLite consensus disorder prediction 2062 2077 - -
Arst4g03246 2175 Gene3D - 738 811 - -
Arst4g03246 2175 CDD SF2_C_SNF 1263 1388 - -
Arst4g03246 2175 Gene3D - 1868 1997 IPR036427 GO:0005515
Arst4g03246 2175 Coils Coil 686 710 - -
Arst4g03246 2175 MobiDBLite consensus disorder prediction 2025 2045 - -
Arst4g03246 2175 FunFam Brahma1 1868 1990 - -
Arst4g03246 2175 MobiDBLite consensus disorder prediction 452 515 - -
Arst4g03246 2175 Pfam Helicase conserved C-terminal domain 1267 1378 IPR001650 -
Arst4g03246 2175 Pfam SNF2-related domain 939 1244 IPR000330 GO:0005524|GO:0140658
Arst4g03246 2175 Coils Coil 1484 1504 - -
Arst4g03246 2175 SUPERFAMILY Bromodomain 1919 1978 IPR036427 GO:0005515
Arst4g03246 2175 MobiDBLite consensus disorder prediction 238 312 - -
Arst4g03246 2175 MobiDBLite consensus disorder prediction 91 112 - -
Arst4g03246 2175 MobiDBLite consensus disorder prediction 1995 2017 - -
Arst4g03246 2175 MobiDBLite consensus disorder prediction 1724 1738 - -
Arst4g03246 2175 FunFam ATP-dependent helicase BRM 1176 1387 - -
Arst4g03246 2175 MobiDBLite consensus disorder prediction 1549 1576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03246 Arst-Chr4 109537271 109547759 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03246 918 1419 RAD5 or RAD16-like Gene Family AT1G02670 25.610 4.84e-28 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Arst4g03246 SNF2_N 2.1e-66 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03246 K11647 - gmx:100811608 3173.26