Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03245 ATGCAATCTGCCGGCAGCGGTGGCTCGGGCCGGAACCCCTCGGCTGGCCGGGCGGCTTCGGCATCGCCGTCGTCGTCTTCCCAATTTAGCCTGGACTCATTGCATCAGCAGCAGCAGAAGATAGGTTCTAGGCAGTCATTTCCACATCAATTGCTAAAAAAACCAGAAGGAAGTGAAGCATTTTTTGCATATCAAACAGGGCTTCAAGGTGGATTTGGGACTAACAATTTCTCACCTTCTAATGCCATGCCTCAGCAGCCTCAAAAATTTGTTGATTTAGGTCAGCAGAGCTCCAGCCAGGGACAAGTTGCTGACCGGCAAATGCTCAATTACCAACAAGCATACCTTCAATATGCTCTGCAGGCTCAACAAAAATCTGCTTTGGCAATGCAGTCACAGAAACAATCTAAAATGGGGATCCCAGGCCCTTCATCTGTGAATGATCGGGACATGCATACTGGAAATCTGAAAATACAGGACCTTATGTCTATGCAAGCTGTTAATCAATCCCAAGCATCATCCTCTAGGAATTCATCTGAACATTTTGCTCATGGGGAAAAGCAGATGGAGCAAGGACAGCAGCTAGCATTTGATCAGAAGAGTGAAGGAAAGCCTTCATCCCAAGGACCAGCCACTGGACACTTAATGCCAGGAAATAGTATGAGGCCACCTGTGCAAGCACCACCAACGCAGCAGAGCATGCTAAATATGTTGAAGGATCCATTACCATTTACTAAGACTGCTCAATATCAGGCTATGCAGGCATGGGCAAGAAATTTATCTGATCCTTCAAGATGTCTTAAGATGGCTCAGCTCATTCCGCAGATGCAATCAAGAACAGTTCCACAACCAAAGGCAAATGATACTAATGTTGGTACTCAGTCATTACCAGTCAGTGTTTCAAACCCACAGGCTAGTTCTCCAACAGTTGCAAGTGAGAACACAACACATACTAATTCATCTAATGATGTTTCTGCACAATCAAGTTCTGCTAAAGCAAAGCAGACAGGTCCATCTAACCATTTTGGCCCACCAATTAATGCCAGTATTGCTGGAAATTCCAGTGAAGTTGCATTGCCACAATTCAATCTTCATGGCAGAGACTCGCAAGGTTCTTTGAGGCAACCAGCAGTAAAAAATGGAATGTCTTCTATGCATCCGCAGCATGCTTGTGCAAGCTTAAACCTAGGTGCAGATCATCCTTTGAATGCAAAAACTTCATCATCTAGTTCAGAACCTGTGCAGATGCAGCACATCAGGCAATCAAATCAATCTGTTGTTCAGGATGGAGGTCTGTCAAACGAAGGGGGTTCTATAAATCATTCAAAATATCAAGGGGCACCATCTCAGATGCCTCAACAAAGAACTGCATTTACGAAACAACAGCTTCATGTTCTTAAAGCTCAGATACTTGCATTTAGACGACTGAAGAAAGGAGAAGGAACTCTTCCCCAAGAACTTCTTCGGGCCATCAGTCCACCACCTCTTGATTCACAAGTGCAGCAACCGGTTACTTCTGCAGGAGGGCAAAATCAAGACCAATCAGAAGTAACTGTGGCAGAACAGCCAAAGCAGATGGAGTCCATTGCCAAGGACTCACAATCTATCTCATCTATTAATGCAAAGGGTTCTTCAAAGCAGGAAGTCTTTGCTAGAGATGAGAAATCCACAACAACAATACATGTGCAAGCTATGCCTTTGGTGATAAAAGAACCTGCTGGAAAGGAAGAGCAACAATCTGTTGGTTGCTCTGCTATGTCGGACCAGGAAGGTGAACATGGAATTAGACAAATACCTGTTAGAAATGAGTCGGTGTTAGATAGGGGAAAGGCTATTGCAGCCCAAGCTTCTGTTTCTGAACAATTGCAAAATAATAAAACTGAACAAGCAAGCATTGTTGCGCAGCCAAAGGATGTGGGCCTCACCAGAAAATATCATGGACCACTATTTGATTTTCCTTTCTTCACCAGGAAACACGATTCCTTTGGTTCATCAATGATGCTAAACCACAATAATTTGTCACTGGCATATGATGTGAAAGAGCTTCTTTATGATGAAGGTGTGCAAGTCCTTAACAAGAAAAGGACAGAAAATTTAAAGAAGATTGAGGGTTTACTGGCAGTTAACTTAGATAGGAAAAGAATTAGGCCAGATCTTGTGTTGAAGTTGCAAATTGAAGAAAAAAAGCTTCGCCTTTTAGATCTACAGGCACGTTTAAGGGATGAGATTGATCAACATCAAAAAGAGATAATGGCAATGCCAGATAGGCCATATAGGAAATTTGTTAAGTTGTGCGAACGTCAGCGTATGGAACTTGCTAGACAAGTGCAGGCATCACAGAAAGCTTTAAGGGAGAAGCAACTGAAATCTATATTCAATTGGCGCAAGAAGCTTCTTGAAGCACACTGGGGCATTCGTGACGCACGGACTGCTCGCAACCGGGGGGTGGCCAAGTATCACGAGAAGATGTTGAGAGAATTCTCGAAACGTAAGGATGATGACAGGAGCAAAAGGATGGAAGCCTTAAAAAACAATGATGTTGATAGGTACAGGGAGATGTTGCTGGAGCAGCAGATTAGTATCCCGGGTGATGCTGCAGAGAGATATGCTGTTCTTTCAACTTTCTTAACCCAGACTGAAGAATATCTACATAAATTAGGAAGTAAGATAACAGCTGCTAAGAGCCAACAGGAAGTGGAGGAGGCAGCAAAAGCTGCTGCAGCTGCTGCACGATTGCAGGGTCTTTGTGAAGAAGAAGTCAGAGTCGCAGCAACTTGTGCTGGAGAGGAAGTGATGATTAGAAATCAGTTTATAGAGATGAATACTCCTAGAGACAGTTCATCTGTCAACAAGTATTACAGCCTTGCTCATGCTGTGAGTGAAAGGGTTGTAAGACAACCATCCATGTTACGAGCTGGAACATTGAGAGACTATCAAATGGTTGGTTTGCAATGGATGCTTTCTTTGTATAACAACAAATTAAATGGAATATTGGCAGATGAGATGGGTCTTGGTAAAACCGTTCAGGTCATGGCATTAATTGCGTACTTGATGGAATTTAAAGGGAACTATGGCCCACATCTTATAATAGTGCCAAATGCTGTTTTGGTTAACTGGAAGAGTGAGTTGCATACTTGGTTACCATCCGTGTCATGCATTTTTTATGTTGGAACAAAGGATACAAGATCAAAATTATTTTCTCAGGAGGTTATGGCTATGAAATTTAATGTCCTTGTGACTACTTATGAGTTCATCATGTATGACCGGTCAAAGCTTTCAAAAGTTGATTGGAAGTATATCGTAATTGATGAAGCACAGAGAATGAAGGATAGGGATTCAGTTCTAGCACGCGATCTTGACAGATACCGTTGTCAACGACGCTTGCTTCTGACAGGAACACCTTTGCAGAATGATTTGAAGGAACTCTGGTCACTTTTAAATTTACTTCTTCCAGAGGTTTTTGACAATAAGAAAGCCTTCCATGATTGGTTTTCAAAACCATTTCAAAAGGAAGGTCCAAATCAGAATGCAGAGGATGACTGGCTTGAAACAGAAAAGAAAGTCATCATTATCCATCGACTCCATCAGATTCTTGAGCCTTTCATGCTTAGGCGTCGCGTTGAAGATGTTGAAGGCTCTCTACCACCAAAGGTCTCCATAGTTTTACGATGTAAAATGTCAGCTGTCCAGAGTGCCATTTATGACTGGGTTAAATCCACTGGCACCCTTCGTGTTGATCCTGAGGATGAGAGAAGAAAGGTTTTGAAGAATCCACTCTACCAGGCAAAGCCTTATAAAACTTTAAATAACAGATGCATGGAGCTACGCAAAACCTGCAATCATCCAATGCTTAATTACCCATTTTTTGATGAATTTATGGATAGAGACTTTATTGTACAATCTTGTGGGAAGTTGTGGATTTTGGATAGGATCCTTATCAAACTTCAAAGGACTGGACATCGAGTTCTGCTGTTTAGTACCATGACAAAGCTCCTAGACATCTTGGAAGACTATCTGCAATGGCGGAGACTAGTTTACAGGAGAATTGATGGGACAACAAGTTTGGAAGACCGAGAATCAGCAATAATGGACTTCAATAGGCCTGATTCAGACTGTTTCATCTTCTTGCTTAGCATTAGAGCTGCTGGGAGAGGCCTTAATCTTCAGTCTGCTGACACAGTTGTCATTTACGATCCTGATCCAAATCCTAAAAATGAGGAGCAGGCTGTGGCCAGAGCTCATCGGATTGGACAAAAAAGGGAAGTCAAGGTTATCTACATGGAGGCTGTTGTTGACAAGATCTCTAGCCATCAGAAAGAGAACGAATTGAGAAGTGGAGGCCTTGTTGATATGGAGGATGAACTTGCTGGTAAGGATCGATATATGGGATCTATTGAGAGCCTCATAAGGAACAATATTCAACAATATAAGATAGACATGGCTGACGAGGTCATTAATGCTGGACGTTTTGATCAAAGAACAACACATGAAGAAAGACGTTCAACTTTGGAGACTTTATTACATGACGAGGAAAGATATCAAGAAACTGTTCATAATGTTCCGTCACTACAGGAGGTTAATCGCATGATTGCTAGAAGTGAAGAGGAAGTTGAACTGTTTGATCAAATGGACGAAGAACTGGATTGGAGTGAAGAGATGACACGGCATGATGAGGTGCCTAAATGGCTTCGAACCAGCACAAGAGAAGTGAATGCTGCTATTGCTGCTTTATCTAAAAGACCATCAAAGAACATTTTATTTGGTGGCAGTATGGGCGTGGAATCTAGTGAATTGGGTTCTGAAAAGAGAAGAGGACGACCCAAGGGAAAAAAGCTTCCTAATTATAAAGAGTTGGAGGATGATGATATAATTGAGTGCTCTGAAGAAAGCTCTGAGGAAAGAAATGGATATTCTGCACATGAAGAAGGGGAGATAGGAAAATTTGAAGATGAAGTACATAGTGGGGGTGATGGAGCTAATCTCATGGAAAAAGATCAAGTCGAACATGGTCCACCTTTTAATGCTGGATATGAACTTCCTCGGTCTTTAGAAAATGCTAAAAATCACACAGTTGAAGAAGCTGGTACGAGAGGATCATCATTAGATAGTCAAATATTGACACATACAGTGACACCATCAGTTTACTCACGGAAATTTGGTTCCCTCTCTGCATTAGATGCCAAGCCAAGTTCCATTTCAAAAAGGGTAGATGAGTTAGAAGAAGGGGAAATTGCAATATCTGGTGGTTCTCACATGGATCATCAACAATGTAGAAGTTGGATTCATGATCGTGATGAAGGTGAGGATGAACAAGTTCTGCAGCAACCCAAGATCAAACGCAAACGTAGTCTACGTGTTCGACACCGTCCTGTCATCGAAAGGCCTGAGGACAAATCTGGCATTGAGATGGTTCCTCTTCAACGTGGAGAATCATCTCTTATTGCAGACAATAAATATCAAGGTCAAACAAGGACTGACCGAGAATCAAAATCACTTGTTGACAATAATGCCAGCAAGCATGATAAGGATGAATCTTCATTGGAAAATAAGCAAAATTTACCTTCAAGGAAAGCAGCTAATTCATTCAAATTACATGGCTCACCTAAGTCTAATCGTATGATCTGCTTGTCTGCTCCTTCAGAGGATGGTGGTGAACACCCTAAAGAAAGTTGGGAAGGAAAGCCTATCAACTCAGCTGGATCTTCAGCTCATGGCTCTAAGATGACCGAAATTATTCAGAGAAGATGCAAAAATGTAATTAGCAAATTCCAAAGGAGAATAGACAAGGAAGGCCAACAAATTGTACCTTTGCTATCAGATTTGTGGAAGATGGAGAATTCTGGGTACACTGGCGGATCAGGGAACAGTTTGTTGGATCTACGAAAGATTGAGCAGCAGATTGATGCATTGGAGTATAATGGAGTAATGGAGCTTGTGTTTGATGTGCAGTTTATGTTGAGGAGTGCGATGCAATTTTATGGATACTCATATGAGGTAAGAACTGAAGCAAGGAAGGTTCATGATCTCTTTTTTGATATTTTGAAAATTGCATTTCCCGATACGGACTTTGCAGAAGCAAAAGGTTCCCTTTCTTTCTCCGGCCAAATTGATTCCAATGCCATAACATCCCCTAGGCAAGGAAATGTTTGCCCAAGCAAGAGGCAAAGGACAATAAATGATGTGGAAACCGATCAATGCCCTGAACAAAAGGCTCCGAACCGTGGTTCCGGGTCTAACAGCGAAAAAGCCAGGAACAAAGGCCATCCATTGCAGAAGGAATTGAGACCTGGAAGCGGTAGTGGTAGTGCCCGGGAGCAATATCAGCAGAATAATTCTTCTGCATTAGTTCATCCAGGTGATCTGGTTGTATGCAAGAAGAAAAGAAATGACAGAGAAAAATTATTGGCGAAGCCTAGGACCACATCCGCCGGTCCTGTTTCACCACCCAGTATGGGTAAGAATAGAAGTCCTGGGTCAGGTTCGACTCCCAAGGATGCGAGGGTGTTTCAACATACTTCAAATGTGCAAGGGCGGTTTAGCCAGCCATATCAGCTGTCAAATGGGTCTGGTGGGTTAGTTGGCTGGGCAAACCCGGTAAAGCGACTAAGAACAGATTGTGGGAAGAGGAGACCAAGCCATACATAG 6645 0.4245 MQSAGSGGSGRNPSAGRAASASPSSSSQFSLDSLHQQQQKIGSRQSFPHQLLKKPEGSEAFFAYQTGLQGGFGTNNFSPSNAMPQQPQKFVDLGQQSSSQGQVADRQMLNYQQAYLQYALQAQQKSALAMQSQKQSKMGIPGPSSVNDRDMHTGNLKIQDLMSMQAVNQSQASSSRNSSEHFAHGEKQMEQGQQLAFDQKSEGKPSSQGPATGHLMPGNSMRPPVQAPPTQQSMLNMLKDPLPFTKTAQYQAMQAWARNLSDPSRCLKMAQLIPQMQSRTVPQPKANDTNVGTQSLPVSVSNPQASSPTVASENTTHTNSSNDVSAQSSSAKAKQTGPSNHFGPPINASIAGNSSEVALPQFNLHGRDSQGSLRQPAVKNGMSSMHPQHACASLNLGADHPLNAKTSSSSSEPVQMQHIRQSNQSVVQDGGLSNEGGSINHSKYQGAPSQMPQQRTAFTKQQLHVLKAQILAFRRLKKGEGTLPQELLRAISPPPLDSQVQQPVTSAGGQNQDQSEVTVAEQPKQMESIAKDSQSISSINAKGSSKQEVFARDEKSTTTIHVQAMPLVIKEPAGKEEQQSVGCSAMSDQEGEHGIRQIPVRNESVLDRGKAIAAQASVSEQLQNNKTEQASIVAQPKDVGLTRKYHGPLFDFPFFTRKHDSFGSSMMLNHNNLSLAYDVKELLYDEGVQVLNKKRTENLKKIEGLLAVNLDRKRIRPDLVLKLQIEEKKLRLLDLQARLRDEIDQHQKEIMAMPDRPYRKFVKLCERQRMELARQVQASQKALREKQLKSIFNWRKKLLEAHWGIRDARTARNRGVAKYHEKMLREFSKRKDDDRSKRMEALKNNDVDRYREMLLEQQISIPGDAAERYAVLSTFLTQTEEYLHKLGSKITAAKSQQEVEEAAKAAAAAARLQGLCEEEVRVAATCAGEEVMIRNQFIEMNTPRDSSSVNKYYSLAHAVSERVVRQPSMLRAGTLRDYQMVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHTWLPSVSCIFYVGTKDTRSKLFSQEVMAMKFNVLVTTYEFIMYDRSKLSKVDWKYIVIDEAQRMKDRDSVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNKKAFHDWFSKPFQKEGPNQNAEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCKMSAVQSAIYDWVKSTGTLRVDPEDERRKVLKNPLYQAKPYKTLNNRCMELRKTCNHPMLNYPFFDEFMDRDFIVQSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEDYLQWRRLVYRRIDGTTSLEDRESAIMDFNRPDSDCFIFLLSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEAVVDKISSHQKENELRSGGLVDMEDELAGKDRYMGSIESLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRSTLETLLHDEERYQETVHNVPSLQEVNRMIARSEEEVELFDQMDEELDWSEEMTRHDEVPKWLRTSTREVNAAIAALSKRPSKNILFGGSMGVESSELGSEKRRGRPKGKKLPNYKELEDDDIIECSEESSEERNGYSAHEEGEIGKFEDEVHSGGDGANLMEKDQVEHGPPFNAGYELPRSLENAKNHTVEEAGTRGSSLDSQILTHTVTPSVYSRKFGSLSALDAKPSSISKRVDELEEGEIAISGGSHMDHQQCRSWIHDRDEGEDEQVLQQPKIKRKRSLRVRHRPVIERPEDKSGIEMVPLQRGESSLIADNKYQGQTRTDRESKSLVDNNASKHDKDESSLENKQNLPSRKAANSFKLHGSPKSNRMICLSAPSEDGGEHPKESWEGKPINSAGSSAHGSKMTEIIQRRCKNVISKFQRRIDKEGQQIVPLLSDLWKMENSGYTGGSGNSLLDLRKIEQQIDALEYNGVMELVFDVQFMLRSAMQFYGYSYEVRTEARKVHDLFFDILKIAFPDTDFAEAKGSLSFSGQIDSNAITSPRQGNVCPSKRQRTINDVETDQCPEQKAPNRGSGSNSEKARNKGHPLQKELRPGSGSGSAREQYQQNNSSALVHPGDLVVCKKKRNDREKLLAKPRTTSAGPVSPPSMGKNRSPGSGSTPKDARVFQHTSNVQGRFSQPYQLSNGSGGLVGWANPVKRLRTDCGKRRPSHT 2214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03245 2214 SMART ultradead3 971 1160 IPR014001 -
Arst4g03245 2214 MobiDBLite consensus disorder prediction 1 54 - -
Arst4g03245 2214 MobiDBLite consensus disorder prediction 495 545 - -
Arst4g03245 2214 FunFam ATP-dependent helicase BRM 966 1214 - -
Arst4g03245 2214 MobiDBLite consensus disorder prediction 2101 2116 - -
Arst4g03245 2214 CDD SF2_C_SNF 1302 1427 - -
Arst4g03245 2214 Pfam QLQ 457 491 IPR014978 GO:0005524|GO:0005634|GO:0006355
Arst4g03245 2214 MobiDBLite consensus disorder prediction 1821 1850 - -
Arst4g03245 2214 MobiDBLite consensus disorder prediction 491 554 - -
Arst4g03245 2214 FunFam ATP-dependent helicase BRM 1215 1426 - -
Arst4g03245 2214 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 958 1205 IPR027417 -
Arst4g03245 2214 MobiDBLite consensus disorder prediction 2064 2084 - -
Arst4g03245 2214 MobiDBLite consensus disorder prediction 2143 2191 - -
Arst4g03245 2214 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 987 1152 IPR014001 -
Arst4g03245 2214 MobiDBLite consensus disorder prediction 1588 1615 - -
Arst4g03245 2214 Gene3D - 966 1214 IPR038718 -
Arst4g03245 2214 MobiDBLite consensus disorder prediction 277 351 - -
Arst4g03245 2214 MobiDBLite consensus disorder prediction 2034 2056 - -
Arst4g03245 2214 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1209 1547 IPR027417 -
Arst4g03245 2214 MobiDBLite consensus disorder prediction 1763 1777 - -
Arst4g03245 2214 MobiDBLite consensus disorder prediction 1763 1907 - -
Arst4g03245 2214 FunFam Brahma1 1907 2029 - -
Arst4g03245 2214 SUPERFAMILY Bromodomain 1958 2017 IPR036427 GO:0005515
Arst4g03245 2214 Gene3D - 777 850 - -
Arst4g03245 2214 Pfam SNF2-related domain 978 1283 IPR000330 GO:0005524|GO:0140658
Arst4g03245 2214 SMART bromo_6 1909 2019 IPR001487 GO:0005515
Arst4g03245 2214 MobiDBLite consensus disorder prediction 1 46 - -
Arst4g03245 2214 Gene3D - 1215 1426 IPR027417 -
Arst4g03245 2214 Coils Coil 725 749 - -
Arst4g03245 2214 MobiDBLite consensus disorder prediction 1789 1803 - -
Arst4g03245 2214 MobiDBLite consensus disorder prediction 132 151 - -
Arst4g03245 2214 Gene3D - 1907 2036 IPR036427 GO:0005515
Arst4g03245 2214 Coils Coil 1523 1543 - -
Arst4g03245 2214 SMART QLQ_2 456 493 IPR014978 GO:0005524|GO:0005634|GO:0006355
Arst4g03245 2214 MobiDBLite consensus disorder prediction 2121 2137 - -
Arst4g03245 2214 MobiDBLite consensus disorder prediction 166 231 - -
Arst4g03245 2214 SMART helicmild6 1333 1417 IPR001650 -
Arst4g03245 2214 MobiDBLite consensus disorder prediction 192 214 - -
Arst4g03245 2214 Pfam Helicase conserved C-terminal domain 1306 1417 IPR001650 -
Arst4g03245 2214 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1307 1484 IPR001650 -
Arst4g03245 2214 PANTHER SNF2/RAD54 HELICASE FAMILY 711 1687 - -
Arst4g03245 2214 MobiDBLite consensus disorder prediction 2034 2196 - -
Arst4g03245 2214 ProSiteProfiles QLQ domain profile. 457 493 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03245 Arst-Chr4 109536736 109547759 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03245 957 1458 RAD5 or RAD16-like Gene Family AT1G02670 25.436 6.10e-28 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Arst4g03245 SNF2_N 2.1e-66 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03245 K11647 - gmx:100811608 3188.28