Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03210 ATGGCTGTGGTGAGTCCTGTGCCTGCAACAACACAAAGGATGGGTTCTGTGAGGCGAGTTCAAGAGGGTGAAATTGTTGGGGAGCCTAATCAAGCTGTGGTAGTTGATGAACCAATCTATGTTGCTGTGTCAAAAGAAGTGAAAGAGAGCAAGCTGAATCTGATATGGGCGATTCAGAACTCTGGAGGAAGGAGGATTTGCATACTTCATGTTCATGTTCCTGCAACCAAGATCCCTTTGATGGGTGCTATGTTCCCTGCAAGTTCACTGAAAGAGCAGGAGGTTCGAGCATACCGGGATATTGAAAGGCAAACCATGCATAAGACTCTTGATGAGTATCTTCGTATATGTCAACGGATGGGGGTGCAGGCGGAGAAAGTGCATATTGAAATGGACAACATTGAAAAAGGAATTGTAGAACTTGTCTCCCAACGTGGCATCCAAAGGCTTGTCATGGGAGCGGCATCGGACCGATCCCATTCTAGGAGAATGATGGACTTGAAATCTAAGAAAGCCATCTTTGTATGTGAGCAAGCTCCGGCATTTTGTTGGATACAGTTTATCTGCAAAGGGCACCTTATACACACAAGGGATTTGGTACAACAAGTTCCAAACTCTGAAGCTGAACATCCAGTACTCCCGAGATCTCAATCTGTTATTACTCCGGGCCAAAATCAAACTAGTCATCGTCGGGAGTTATTTCGCAAAGTAAGGTCTGCCAATGATGGTGCTGTAGGGGGCATTATGCATGATTCTTCTCCAGATAACTTTGAAGGGTTCTCAACTCCACCAAATAGGTTAGGTACTGATTTAAGTTCTGATGAGTCAGATAGGCTGTCAAGGACAAGGAGTCCTTCAGCTTTGTCAGTGTGCTCCGATAGTGGTGCTGTTGACCCAATGTTGAGCCCAAATTCGGTTAGTGAGATTGCCGAGAACGTAGCAGAGTTGACTTTGAGCCATGCAATCAAAGAGGATCTTCATTCTTCTCCTCCTAGTGTACTGGATGGAGGAATGAATGATACTATATATGATCAACTTGAATTGGCTATGGCTGAGGCCGAGAGAGCCACACGAAACGCATATCAAGAAACATATAGGCGTGGGAAAGCTGAAAAGGAGGCCATTGAAGCTATGCGAAAGGCTAAAATCTCTGAAAGTTTATATGTAGAAGAGTTGAATCTGAGGAAAAGGGCCGAGGAAGAACTACAAAAAGAAAAAGAACAACTTCAAAATATGAAGATCCAGAGAGACAAAGTTAAGGAAGAACTCCAACTTGCACTGGATCAGAAGTCATCACTGGAGAGCCAAATTGCATCATCCGAACTTATGATAAAGGAGTATGAGCAGAAGATCATTTCTGCCGTGGATCTGTTACAAAGCTACAAGAACGAACGGGATGAGTTGCAGGTACAGCGCGATGAAGTGCTGAGAGAGGCCACGGAGTTGAGGAAAAAACAAGGAGAGGCCTCTGGCACTCGCACGCCTCAATTGTTTTCGGAGTTCTCTTTCCTTGAGATAGAACAAGCAACAAATAACTTTGATCAGTCCCTAAAGATAGGAGAAGGTGGATATGGAAGTATATTTAAAGGTATGTTGCGGCACACTGAGGTGGCTATAAAGATGTTGCACTCTGACAGCATGCAAGGACCCTTGGAGTTTCAACAAGAGGTTGATGTATTGAGCAAGTTAAGGCATCCAAATCTTATCACACTTGTTGGAGCCTGCCCAGAATCCTTTACTCTTATCTACGAGTATTTACCGAATGGGAGCCTTGAAGACCGTCTGGTTTGCAAGGATAACACACCTCCCTTGCCATGGCAAACTCGAATTCGCATTGCTGCAGAACTTTGTTCAGCTCTCATCTTCCTTCACTCAAGTAAACCGCACCGCATAGTGCACGGTGACTTGAAACCCTCTAACATTCTCCTTGATGCAAACCTTATTAGCAAGCTAAGCGACTTTGGAATCTGCCGCATATTATCTCGTCGTGAGGATTCGACTGATAACACTACGGAGTGTTGGAGAACCCACCCAAAGGGAACTTTTGTTTACATGGATCCGGAATTCCTTGCGTCCGGGGAACTTACTCCAAAGTCAGATGTTTATTCCTTTGGAGTCATATTGATGAGATTGTTGACAGGAAGACCGGCCTTGGGAATAACAAAGGAAGTGTCCTATGCACTGGAAACCGGAAAGCTGAAATCCCTGTTGGATCCTTTAGCCGGAGACTGGCCATTCGTGCAAGCCGAACAATTGGCTCGCCTGGCCATGAGGTGTTGCGAGATGAATAGAAAGAACCGGCCGGATCTTTATTCCGATGTATGGAGGGTATTGGACCCCATGACAGCTTCCTCTGGAGGCACACTAAGTCCTTCAGGTCTTTACCAACAAACACCATCATATTTCATTTGTCCAATCTTTCAGGAAGTAATGCGAGATCCGCATGTAGCTGCGGATGGCTTCACTTATGAAGCCGAGGCCATAAGAGGGTGGCTTGACAGCGGTCACGACGATTCGCCAATGACAAATTCGAAGCTTGCGCACCGCAATCTTGTTCCGAACCGCGCACTCAAGTCTGCAATCCATGACTGGCTTCAAAGTCATTAA 2607 0.4553 MAVVSPVPATTQRMGSVRRVQEGEIVGEPNQAVVVDEPIYVAVSKEVKESKLNLIWAIQNSGGRRICILHVHVPATKIPLMGAMFPASSLKEQEVRAYRDIERQTMHKTLDEYLRICQRMGVQAEKVHIEMDNIEKGIVELVSQRGIQRLVMGAASDRSHSRRMMDLKSKKAIFVCEQAPAFCWIQFICKGHLIHTRDLVQQVPNSEAEHPVLPRSQSVITPGQNQTSHRRELFRKVRSANDGAVGGIMHDSSPDNFEGFSTPPNRLGTDLSSDESDRLSRTRSPSALSVCSDSGAVDPMLSPNSVSEIAENVAELTLSHAIKEDLHSSPPSVLDGGMNDTIYDQLELAMAEAERATRNAYQETYRRGKAEKEAIEAMRKAKISESLYVEELNLRKRAEEELQKEKEQLQNMKIQRDKVKEELQLALDQKSSLESQIASSELMIKEYEQKIISAVDLLQSYKNERDELQVQRDEVLREATELRKKQGEASGTRTPQLFSEFSFLEIEQATNNFDQSLKIGEGGYGSIFKGMLRHTEVAIKMLHSDSMQGPLEFQQEVDVLSKLRHPNLITLVGACPESFTLIYEYLPNGSLEDRLVCKDNTPPLPWQTRIRIAAELCSALIFLHSSKPHRIVHGDLKPSNILLDANLISKLSDFGICRILSRREDSTDNTTECWRTHPKGTFVYMDPEFLASGELTPKSDVYSFGVILMRLLTGRPALGITKEVSYALETGKLKSLLDPLAGDWPFVQAEQLARLAMRCCEMNRKNRPDLYSDVWRVLDPMTASSGGTLSPSGLYQQTPSYFICPIFQEVMRDPHVAADGFTYEAEAIRGWLDSGHDDSPMTNSKLAHRNLVPNRALKSAIHDWLQSH 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03210 868 PANTHER OS02G0152300 PROTEIN 39 862 - -
Arst4g03210 868 Coils Coil 343 363 - -
Arst4g03210 868 CDD RING-Ubox_WDSUB1-like 799 854 - -
Arst4g03210 868 ProSiteProfiles Protein kinase domain profile. 513 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03210 868 SMART Ubox_2 801 864 IPR003613 GO:0004842|GO:0016567
Arst4g03210 868 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672|GO:0006468
Arst4g03210 868 SUPERFAMILY Protein kinase-like (PK-like) 493 770 IPR011009 -
Arst4g03210 868 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 49 162 - -
Arst4g03210 868 Coils Coil 388 485 - -
Arst4g03210 868 SMART serkin_6 513 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03210 868 Pfam U-box domain 799 868 IPR003613 GO:0004842|GO:0016567
Arst4g03210 868 Gene3D HUPs 30 165 IPR014729 -
Arst4g03210 868 ProSiteProfiles U-box domain profile. 797 868 IPR003613 GO:0004842|GO:0016567
Arst4g03210 868 FunFam receptor-like protein kinase FERONIA 477 585 - -
Arst4g03210 868 MobiDBLite consensus disorder prediction 244 295 - -
Arst4g03210 868 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 796 868 IPR013083 -
Arst4g03210 868 SUPERFAMILY RING/U-box 790 867 - -
Arst4g03210 868 Gene3D Phosphorylase Kinase; domain 1 484 585 - -
Arst4g03210 868 Pfam Protein kinase domain 515 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03210 868 Gene3D Transferase(Phosphotransferase) domain 1 586 787 - -
Arst4g03210 868 MobiDBLite consensus disorder prediction 255 270 - -
Arst4g03210 868 CDD STK_N 38 191 - -
Arst4g03210 868 ProSitePatterns Protein kinases ATP-binding region signature. 519 540 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03210 Arst-Chr4 109216626 109221756 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03210 1 868 U-box Gene Family AT2G45910 53.439 0.0 902
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Arst4g03210 Pkinase 1.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03210 - - gmx:100807515 1292.33