Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03209 ATGGCTGTGGTGAGTCCTGTGCCTGCAACAACACAAAGGATGGGTTCTGTGAGGCGAGTTCAAGAGGGTGAAATTGTTGGGGAGCCTAATCAAGCTGTGGTAGTTGATGAACCAATCTATGTTGCTGTGTCAAAAGAAGTGAAAGAGAGCAAGCTGAATCTGATATGGGCGATTCAGAACTCTGGAGGAAGGAGGATTTGCATACTTCATGTTCATGTTCCTGCAACCAAGATCCCTTTGATGGGTGCTATGTTCCCTGCAAGTTCACTGAAAGAGCAGGAGGTTCGAGCATACCGGGATATTGAAAGGCAAACCATGCATAAGACTCTTGATGAGTATCTTCGTATATGTCAACGGATGGGGGTGCAGGCGGAGAAAGTGCATATTGAAATGGACAACATTGAAAAAGGAATTGTAGAACTTGTCTCCCAACGTGGCATCCAAAGGCTTGTCATGGGAGCGGCATCGGACCGATCCCATTCTAGGAGAATGATGGACTTGAAATCTAAGAAAGCCATCTTTGTATGTGAGCAAGCTCCGGCATTTTGTTGGATACAGTTTATCTGCAAAGGGCACCTTATACACACAAGGGATTTGGTACAACAAGTTCCAAACTCTGAAGCTGAACATCCAGTACTCCCGAGATCTCAATCTGTTATTACTCCGGGCCAAAATCAAACTAGTCATCGTCGGGAGTTATTTCGCAAAGTAAGGTCTGCCAATGATGGTGCTGTAGGGGGCATTATGCATGATTCTTCTCCAGATAACTTTGAAGGGTTCTCAACTCCACCAAATAGGTTAGGTACTGATTTAAGTTCTGATGAGTCAGATAGGCTGTCAAGGACAAGGAGTCCTTCAGCTTTGTCAGTGTGCTCCGATAGTGGTGCTGTTGACCCAATGTTGAGCCCAAATTCGGTTAGTGAGATTGCCGAGAACGTAGCAGAGTTGACTTTGAGCCATGCAATCAAAGAGGATCTTCATTCTTCTCCTCCTAGTGTACTGCAGGATGGAGGAATGAATGATACTATATATGATCAACTTGAATTGGCTATGGCTGAGGCCGAGAGAGCCACACGAAACGCATATCAAGAAACATATAGGCGTGGGAAAGCTGAAAAGGAGGCCATTGAAGCTATGCGAAAGGCTAAAATCTCTGAAAGTTTATATGTAGAAGAGTTGAATCTGAGGAAAAGGGCCGAGGAAGAACTACAAAAAGAAAAAGAACAACTTCAAAATATGAAGATCCAGAGAGACAAAGTTAAGGAAGAACTCCAACTTGCACTGGATCAGAAGTCATCACTGGAGAGCCAAATTGCATCATCCGAACTTATGATAAAGGAGTATGAGCAGAAGATCATTTCTGCCGTGGATCTGTTACAAAGCTACAAGAACGAACGGGATGAGTTGCAGGTACAGCGCGATGAAGTGCTGAGAGAGGCCACGGAGTTGAGGAAAAAACAAGGAGAGGCCTCTGGCACTCGCACGCCTCAATTGTTTTCGGAGTTCTCTTTCCTTGAGATAGAACAAGCAACAAATAACTTTGATCAGTCCCTAAAGATAGGAGAAGGTGGATATGGAAGTATATTTAAAGGTATGTTGCGGCACACTGAGGTGGCTATAAAGATGTTGCACTCTGACAGCATGCAAGGACCCTTGGAGTTTCAACAAGAGGTTGATGTATTGAGCAAGTTAAGGCATCCAAATCTTATCACACTTGTTGGAGCCTGCCCAGAATCCTTTACTCTTATCTACGAGTATTTACCGAATGGGAGCCTTGAAGACCGTCTGGTTTGCAAGGATAACACACCTCCCTTGCCATGGCAAACTCGAATTCGCATTGCTGCAGAACTTTGTTCAGCTCTCATCTTCCTTCACTCAAGTAAACCGCACCGCATAGTGCACGGTGACTTGAAACCCTCTAACATTCTCCTTGATGCAAACCTTATTAGCAAGCTAAGCGACTTTGGAATCTGCCGCATATTATCTCGTCGTGAGGATTCGACTGATAACACTACGGAGTGTTGGAGAACCCACCCAAAGGGAACTTTTGTTTACATGGATCCGGAATTCCTTGCGTCCGGGGAACTTACTCCAAAGTCAGATGTTTATTCCTTTGGAGTCATATTGATGAGATTGTTGACAGGAAGACCGGCCTTGGGAATAACAAAGGAAGTGTCCTATGCACTGGAAACCGGAAAGCTGAAATCCCTGTTGGATCCTTTAGCCGGAGACTGGCCATTCGTGCAAGCCGAACAATTGGCTCGCCTGGCCATGAGGTGTTGCGAGATGAATAGAAAGAACCGGCCGGATCTTTATTCCGATGTATGGAGGGTATTGGACCCCATGACAGCTTCCTCTGGAGGCACACTAAGTCCTTCAGGTCTTTACCAACAAACACCATCATATTTCATTTGTCCAATCTTTCAGGAAGTAATGCGAGATCCGCATGTAGCTGCGGATGGCTTCACTTATGAAGCCGAGGCCATAAGAGGGTGGCTTGACAGCGGTCACGACGATTCGCCAATGACAAATTCGAAGCTTGCGCACCGCAATCTTGTTCCGAACCGCGCACTCAAGTCTGCAATCCATGACTGGCTTCAAAGTCATTAA 2610 0.4556 MAVVSPVPATTQRMGSVRRVQEGEIVGEPNQAVVVDEPIYVAVSKEVKESKLNLIWAIQNSGGRRICILHVHVPATKIPLMGAMFPASSLKEQEVRAYRDIERQTMHKTLDEYLRICQRMGVQAEKVHIEMDNIEKGIVELVSQRGIQRLVMGAASDRSHSRRMMDLKSKKAIFVCEQAPAFCWIQFICKGHLIHTRDLVQQVPNSEAEHPVLPRSQSVITPGQNQTSHRRELFRKVRSANDGAVGGIMHDSSPDNFEGFSTPPNRLGTDLSSDESDRLSRTRSPSALSVCSDSGAVDPMLSPNSVSEIAENVAELTLSHAIKEDLHSSPPSVLQDGGMNDTIYDQLELAMAEAERATRNAYQETYRRGKAEKEAIEAMRKAKISESLYVEELNLRKRAEEELQKEKEQLQNMKIQRDKVKEELQLALDQKSSLESQIASSELMIKEYEQKIISAVDLLQSYKNERDELQVQRDEVLREATELRKKQGEASGTRTPQLFSEFSFLEIEQATNNFDQSLKIGEGGYGSIFKGMLRHTEVAIKMLHSDSMQGPLEFQQEVDVLSKLRHPNLITLVGACPESFTLIYEYLPNGSLEDRLVCKDNTPPLPWQTRIRIAAELCSALIFLHSSKPHRIVHGDLKPSNILLDANLISKLSDFGICRILSRREDSTDNTTECWRTHPKGTFVYMDPEFLASGELTPKSDVYSFGVILMRLLTGRPALGITKEVSYALETGKLKSLLDPLAGDWPFVQAEQLARLAMRCCEMNRKNRPDLYSDVWRVLDPMTASSGGTLSPSGLYQQTPSYFICPIFQEVMRDPHVAADGFTYEAEAIRGWLDSGHDDSPMTNSKLAHRNLVPNRALKSAIHDWLQSH 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03209 869 Gene3D Transferase(Phosphotransferase) domain 1 587 788 - -
Arst4g03209 869 Pfam Protein kinase domain 516 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03209 869 ProSiteProfiles Protein kinase domain profile. 514 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03209 869 SMART Ubox_2 802 865 IPR003613 GO:0004842|GO:0016567
Arst4g03209 869 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 49 162 - -
Arst4g03209 869 Gene3D HUPs 30 165 IPR014729 -
Arst4g03209 869 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 797 869 IPR013083 -
Arst4g03209 869 FunFam receptor-like protein kinase FERONIA 478 586 - -
Arst4g03209 869 PANTHER OS02G0152300 PROTEIN 39 863 - -
Arst4g03209 869 CDD RING-Ubox_WDSUB1-like 800 855 - -
Arst4g03209 869 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Arst4g03209 869 ProSitePatterns Protein kinases ATP-binding region signature. 520 541 IPR017441 GO:0005524
Arst4g03209 869 SMART serkin_6 514 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03209 869 Gene3D Phosphorylase Kinase; domain 1 485 586 - -
Arst4g03209 869 MobiDBLite consensus disorder prediction 244 295 - -
Arst4g03209 869 Coils Coil 344 364 - -
Arst4g03209 869 SUPERFAMILY RING/U-box 791 868 - -
Arst4g03209 869 SUPERFAMILY Protein kinase-like (PK-like) 494 771 IPR011009 -
Arst4g03209 869 ProSiteProfiles U-box domain profile. 798 869 IPR003613 GO:0004842|GO:0016567
Arst4g03209 869 MobiDBLite consensus disorder prediction 255 270 - -
Arst4g03209 869 CDD STK_N 38 191 - -
Arst4g03209 869 Pfam U-box domain 800 869 IPR003613 GO:0004842|GO:0016567
Arst4g03209 869 Coils Coil 389 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03209 Arst-Chr4 109216625 109221756 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03209 1 869 U-box Gene Family AT2G45910 53.008 0.0 901
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Arst4g03209 Pkinase 1.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03209 - - gmx:100807515 1287.71