Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03179 ATGGCAACTGATATGCAGAGGCTTATTGGAACCAGCGAAGATGATGATGAAGAAATAGAGATGGATGTGAAAGAAGAGGATGATGAGGATGGAGATGAAGAGGAAAATGGAGGTGATCATGGAAATGCTTCGGAGATGGTAGGGATTGATGGTGGGAATGGTTTAGTGACTGCTGGTGGTGACAACAGTTTTCAACAGCAACAGCAGTTTCAAGAACAAGTTGGAACCCCAGGTGGATCTGCTCGAAGATGTAGACCACTAGAAGAGAAAGAACGGACAAAGCTAAGAGAGAGGCGCCGGAGGGCTATCACTGCTAAGATCTTGGCAGGGCTTCGCAGGCATGGCAACTACAATCTTAGAGTTAGAGCAGACATAAATGATGTTATTGCTGCTTTAGCAAGGGAAGCTGGGTGGGTGGTTCTTCCTGATGGCACTACTTTTCCTCCAAGATCCCAGGGTCAAAGGCCAACTGGTGGTAATTCTGCAGTTGTCACTCCATCTTCTCCAGTGCCTTCACAACCAACTCCATCTGCTTCCATCAGGGGAGTTGCTTCTGGCTATAGGAGCTCATTAGAGTATAATACATGTCAAACAAAAGGTGTTTTCATGCCAACTCCATCTCCTTATGATCTATCCTCAAGTTCCCGGTCTCAAACATCCATGGTGGGGGATGGAGAGTTACAGAGAGACAATCAACCTTTGGTTGGCAGTGGTTCAATGGATACTGTTCATGAGAAGCAGATTATTGACTTGCCCTGCAGATTATCAGAGCGTGATCTGGCCGGTACTCCATATGTTCCAGTGTATGTGATGCTACCGTTAGGAGTGATCAATATAAAGTGTGAGCTTGTTGATCCAGATGGTCTACTAAAGCAGCTGAAAGTATTGAAATCAATAAACGTTGATGGTGTTACGGTTAATTGTTGGTGGGGAATAGTAGAAGCACATGCTCCACAAGAGTATAATTGGAATGGTTACAAGAGACTCTTTCAGATGGTGCATGAGCTGAAGCTTAAGCTGCAGGTTGTGATGTCGTTTCATGAATGTGGAGGCAATTTTGGTGATGATGTTTGCATTCCTTTGCCCCATTGGGTTGCAGAAATTGGTAGGACCAATCCTGATATCTTCTTCACTGACAGAGAGGGAAGACACAACCCTGAATGTCTTTCTTGGGGAGTAGATAAGGAACGGGTATTAAGAGGTCGGACTGCCTTAGAGGTCTATTTTGATTTCATGAGAAGTTTCCGGGTAGAATTTGATGAGTATTTTGAGGACAGTTTCATCTCTATGATTGAAGTTGGACTTGGTCCGTGCGGAGAGCTAAGATATCCATCTTGTCCTGTAAAACATGGTTGGAGATATCCTGGTGTTGGTGAGTTCCAGTGTTATGATCAATACATGTTGAAAAGTCTCAAGAAAGCAGCCGAAGCACGGGGACACTCTATTTGGGTTAGGGGACCAGATAATGCGGGTACCTATAATTCTCAGCCACATGAAACAGGTTTCTTTTGCGATGGGGGTGATTATGATGGCTTCTATGGCAGGTTTTTCCTTAATTGGTATTCTAAGGTTTTAGTTGATCATGGAAACGGGGTACTTTCTCTGGCGAAATTAGCTTTCGAGGGATCCTGCATTGCTGCAAAGTTGGCAAATATTTACTGGTGGTACAAGACTGCTAGTCATGCTGCTGAATTAACTGCTGGGTATTATAACCCATGTAATCGCGATGGCTATGCAGCTATTATGGAAATGTTAAAGAGCAATGGAGTTAGCTTGAACATTGCTTGTGCCGACTTGAACACATTGAACCAGCTTGAGGTCTTTCCAAAGGCATTCGCTGACCCTGAGGGATTAGTCTGGCAAGTGTTGAATGCAGGTTGGGATCTTGGCTTACCAGTTGCCGGTGAGAATGCACTTCCTTGCCTAAACAGAGTTACCTATAACAAGGCTTTGGATAGTGCCAAACCCATGAATGATCCAGATGGAAGGCACTTTTCTTCCTTCACTTACCTAAGGCTTAGTCCATTACTTATGGAACAGCAAAACCTACGAGAGTTTGAACGATTTATCAAGAGGATGCATGGGGAAGCTGTTCTTGATCTTCAGGTATAA 2112 0.4422 MATDMQRLIGTSEDDDEEIEMDVKEEDDEDGDEEENGGDHGNASEMVGIDGGNGLVTAGGDNSFQQQQQFQEQVGTPGGSARRCRPLEEKERTKLRERRRRAITAKILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPPRSQGQRPTGGNSAVVTPSSPVPSQPTPSASIRGVASGYRSSLEYNTCQTKGVFMPTPSPYDLSSSSRSQTSMVGDGELQRDNQPLVGSGSMDTVHEKQIIDLPCRLSERDLAGTPYVPVYVMLPLGVINIKCELVDPDGLLKQLKVLKSINVDGVTVNCWWGIVEAHAPQEYNWNGYKRLFQMVHELKLKLQVVMSFHECGGNFGDDVCIPLPHWVAEIGRTNPDIFFTDREGRHNPECLSWGVDKERVLRGRTALEVYFDFMRSFRVEFDEYFEDSFISMIEVGLGPCGELRYPSCPVKHGWRYPGVGEFQCYDQYMLKSLKKAAEARGHSIWVRGPDNAGTYNSQPHETGFFCDGGDYDGFYGRFFLNWYSKVLVDHGNGVLSLAKLAFEGSCIAAKLANIYWWYKTASHAAELTAGYYNPCNRDGYAAIMEMLKSNGVSLNIACADLNTLNQLEVFPKAFADPEGLVWQVLNAGWDLGLPVAGENALPCLNRVTYNKALDSAKPMNDPDGRHFSSFTYLRLSPLLMEQQNLREFERFIKRMHGEAVLDLQV 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03179 703 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 215 696 IPR001554 GO:0000272|GO:0016161
Arst4g03179 703 MobiDBLite consensus disorder prediction 58 76 - -
Arst4g03179 703 Gene3D Glycosidases 256 702 - -
Arst4g03179 703 MobiDBLite consensus disorder prediction 11 36 - -
Arst4g03179 703 Pfam Glycosyl hydrolase family 14 269 689 IPR001554 GO:0000272|GO:0016161
Arst4g03179 703 MobiDBLite consensus disorder prediction 147 181 - -
Arst4g03179 703 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 321 339 IPR001554 GO:0000272|GO:0016161
Arst4g03179 703 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 343 364 IPR001554 GO:0000272|GO:0016161
Arst4g03179 703 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 436 458 IPR001554 GO:0000272|GO:0016161
Arst4g03179 703 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 543 559 IPR001554 GO:0000272|GO:0016161
Arst4g03179 703 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 300 314 IPR001554 GO:0000272|GO:0016161
Arst4g03179 703 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 560 571 IPR001554 GO:0000272|GO:0016161
Arst4g03179 703 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 618 640 IPR001554 GO:0000272|GO:0016161
Arst4g03179 703 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 509 528 IPR001554 GO:0000272|GO:0016161
Arst4g03179 703 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 578 601 IPR001554 GO:0000272|GO:0016161
Arst4g03179 703 Pfam BES1/BZR1 plant transcription factor, N-terminal 81 217 IPR008540 -
Arst4g03179 703 MobiDBLite consensus disorder prediction 1 96 - -
Arst4g03179 703 MobiDBLite consensus disorder prediction 145 181 - -
Arst4g03179 703 SUPERFAMILY (Trans)glycosidases 262 699 IPR017853 -
Arst4g03179 703 MobiDBLite consensus disorder prediction 206 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03179 Arst-Chr4 108346729 108353034 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03179 1 700 Glycoside Hydrolase AT2G45880 64.915 0.0 932
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Arst4g03179 Glyco_hydro_14 7.2e-102 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03179 K01177 - gmx:100805560 1157.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g03179 4 108346729 108353034 Arst4g03179 4 108346729 108353034 ECH