Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03154 ATGGATCATGGGGACCAAATGGCATCTTACTATATGCAGCAGAGAGGAATACCTGGTTCTGGAGCACAGCCAGAGTTTTCGGCCGGAATCCGGTCGCTGTCTAGCCCCAACCTACCATTTCAATCCGGCATTGGCAGTGGTGGATCAATTGGATCCACTATACAGCTAGAATCTTCAGGGATTTCGACCCACGGTGTCAATGTTGGTGCTCCTCCGGGGGTACCGCCTGGGGAACCTGTCAAAAGGAAGAGAGGAAGGCCAAGGAAATATGGGACTGATGGAACTGTGTTGGCTCTTACACCAACTTCGTCGAGTCATCCCGGAGCCATGACAACACCAGGCCAGAAACGGGGCCGAGGACGGCCCCCTGGGACTGGGAAGAAACAGCAATTGGCATCACTTGGTGAGATGATTTCTGGTTCGGCCGGGATGGGATTCACTCCTCATGTCATCAACATAGCAAGTGGAGAAGACATTGCAACGAAAATTATGGCATTTTCTCAGCAGGGGTCTAGATTTGTGTTTATTTTGTCTGCCACCGGTGCTGTTTCCACTGTCACACTTCGCCAACCTTCAACTTCAGGTGGCTCAGTCACATATGAGGGGCGTTTTGAGATATTGTGCCTGTCAGGCTCTTACTTGCTTACTGATAATGCTGGATCACGCAATCGAACTGGCGGACTAACTGTTTCCCTTGCTAGTCCTGACGGACGAGTCATTGGTGGAGGAGTTGGGGGAGTGCTCATTGCATCAAGTCCTGTTCAGGTGATAGTTGGAAGCTTTATATGGGGTGGATCAAGAACAAAGAAGAAAAAGGAAAGCACAGAAGGGGTAGAAGCTGCTATGGAGTCGGACCACCAACCGATTCACAATCCGGTTGCACTAAACAGCATTTCACCGAATCAAAATCTTACTCCAACCCCATCTTTGAGTCCCTGGCCGGCGTCGCGTCCCTTGGACATGCGTAATTCCCATGTTGACATTGATTTAATGCGTGGGTGA 1002 0.503 MDHGDQMASYYMQQRGIPGSGAQPEFSAGIRSLSSPNLPFQSGIGSGGSIGSTIQLESSGISTHGVNVGAPPGVPPGEPVKRKRGRPRKYGTDGTVLALTPTSSSHPGAMTTPGQKRGRGRPPGTGKKQQLASLGEMISGSAGMGFTPHVINIASGEDIATKIMAFSQQGSRFVFILSATGAVSTVTLRQPSTSGGSVTYEGRFEILCLSGSYLLTDNAGSRNRTGGLTVSLASPDGRVIGGGVGGVLIASSPVQVIVGSFIWGGSRTKKKKESTEGVEAAMESDHQPIHNPVALNSISPNQNLTPTPSLSPWPASRPLDMRNSHVDIDLMRG 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03154 333 Pfam Plants and Prokaryotes Conserved (PCC) domain 148 261 IPR005175 -
Arst4g03154 333 MobiDBLite consensus disorder prediction 65 129 - -
Arst4g03154 333 SMART AT_hook_2 81 93 IPR017956 GO:0003677
Arst4g03154 333 SMART AT_hook_2 116 128 IPR017956 GO:0003677
Arst4g03154 333 CDD DUF296 147 261 IPR005175 -
Arst4g03154 333 MobiDBLite consensus disorder prediction 297 318 - -
Arst4g03154 333 Gene3D - 148 285 - -
Arst4g03154 333 ProSiteProfiles PPC domain profile profile. 142 282 IPR005175 -
Arst4g03154 333 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 62 300 IPR039605 GO:0003680
Arst4g03154 333 MobiDBLite consensus disorder prediction 96 111 - -
Arst4g03154 333 SUPERFAMILY AF0104/ALDC/Ptd012-like 146 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03154 Arst-Chr4 108148966 108153088 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03154 80 333 AT-hook Motif Nuclear Localized (AHL) Family AT3G61310 54.753 2.34e-76 236