Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03129 ATGGGAAGGAAGCCTTGCTGTGAGAAGAAGGGTTTGAAGAAAGGTCCATGGACTGCTGAAGAAGATGAAATCCTTTCTAACTATATCAAAAACAATGGTGGCCATGGTAGCTGGCGTTCTCTTCCTAAGATCACAGGACTCCTTCGTTGTGGTAAAAGTTGCAGACTTAGGTGGACAAATTATCTTAGACCTGACATTAAAAGGGGTCCCTTTACTTCTGAGGAAGAAAAACTTGTTATACAACTTCATGGCATCCTAGGAAACAGGTGGGCTGCTATTGCTTCTCAGTTACCAGGAAGAACAGATAATGAGATAAAGAATTTATGGAACACACACTTGAAGAAGCGGCTCAAGAACATGGGAATCGATCCGAAAACACACGAGCCGGTTGCCTCGCCACATTACCCCCTCGACAAGGCACACTCCTCGTCGATTTCCACGCGCCATATGGCTCAGTGGGAGAGTGCAAGGCTTGAAGCAGAGGCAAGGCTCTCAACAGAATCATCAAAATTTAACAAGAATAATCCTCTTCGCTCGGCGAAGGCAAAAGTACTAATTTCTAACAAATGTGAATCAATTTATAATGTGACTGCAGAATTGGCCTTAAACCAGTTAGGTACCTCAAACAATGGAATAGGAGGGAATCATGTGAAGGAGGAGTTAGTGTTATGTGCTGAAGAAGAAGGTATGGTTCTTCATGGTTCTGATTCTTCATGCTCTAATGAATTGGAAGATTCATCTGACACTGCATTGCAGCTATTGTTAGATTTCCCCATAAACAATGACATGAGCTTCTTAGAGGGGAACTCTTTTGATTGCAACATTTAG 828 0.4263 MGRKPCCEKKGLKKGPWTAEEDEILSNYIKNNGGHGSWRSLPKITGLLRCGKSCRLRWTNYLRPDIKRGPFTSEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLKNMGIDPKTHEPVASPHYPLDKAHSSSISTRHMAQWESARLEAEARLSTESSKFNKNNPXLRSAKAKVLISNKCESIYNVTAELALNQLGTSNNGIGGNHVKEELVLCAEEEGMVLHGSDSSCSNELEDSSDTALQLLLDFPINNDMSFLEGNSFDCNI 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03129 276 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Arst4g03129 276 FunFam Myb transcription factor 11 68 - -
Arst4g03129 276 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Arst4g03129 276 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Arst4g03129 276 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Arst4g03129 276 CDD SANT 16 62 IPR001005 -
Arst4g03129 276 Gene3D - 70 134 - -
Arst4g03129 276 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Arst4g03129 276 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 228 - -
Arst4g03129 276 SMART sant 67 115 IPR001005 -
Arst4g03129 276 SMART sant 13 64 IPR001005 -
Arst4g03129 276 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Arst4g03129 276 CDD SANT 70 113 IPR001005 -
Arst4g03129 276 FunFam MYB transcription factor 70 117 - -
Arst4g03129 276 Gene3D - 11 68 - -
Arst4g03129 276 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03129 Arst-Chr4 107920538 107923815 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03129 1 270 MYB Transcription Factor Family AT3G61250 59.596 3.61e-109 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst4g03129 Myb_DNA-binding 1.5e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03129 K09422 - gmx:100816569 375.555