Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03125 ATGTCATTCACAGGAACTTTGGACAAATGCAAGGCTTGTGACAAAACTGTTTATGTGGTTGATTTGTTAACTCTTGAAGGTATACCTTACCATAAAAACTGCTTCAGATGCACTCACTGCAAGGGTTATCTTACGATGAGTACCTATTCCTCAATGGATGGTGTCCTGTATTGCAAGACACACTTTGAACAGCTTTTCAAGGAATCTGGAAATTTTAGTAAGAACTTTCAAACAGGTAAAGATTCATATTCTACAACATCATCTTCTGATTCTAACAAGGCTCCAAGCAGACTCTCATCCATGTTTAGTGGAACTCTAGACAAATGCTCAGTTTGTGGAAAAACAGTGTATCCACTGGAGAAGATGTCGCTGGAAGGAGAGTGCTATCACAAGACATGCTTTAGGTGTGCTCATGCAGGTTGTCCTCTGACACACTCCAACTATGCTGCCCTTGATGGTGTCCTGTATTGCAAGCACCATTTCCAGCAGCTCTTCATGGAGAAGGGTAACTACAACCATGTACTCCAGGCTGCAAAGGACAAAAAGGTCAATGCCACTCCACCTTCTGAACAAGCCGATGCTGAAGATGGCGAGAAGCCGGAGTCCGAGGAGAAGAAAGAGGAAGAAGAAGAAGCAGCTCATGAGGAAGAAGAATCTAAGGAAGAGGAAGAGGAAAAGAAAGATGAGGACACTTAG 696 0.431 MSFTGTLDKCKACDKTVYVVDLLTLEGIPYHKNCFRCTHCKGYLTMSTYSSMDGVLYCKTHFEQLFKESGNFSKNFQTGKDSYSTTSSSDSNKAPSRLSSMFSGTLDKCSVCGKTVYPLEKMSLEGECYHKTCFRCAHAGCPLTHSNYAALDGVLYCKHHFQQLFMEKGNYNHVLQAAKDKKVNATPPSEQADAEDGEKPESEEKKEEEEEAAHEEEESKEEEEEKKDEDT 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03125 231 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 3 35 - -
Arst4g03125 231 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 36 76 - -
Arst4g03125 231 Gene3D Cysteine Rich Protein 105 173 - -
Arst4g03125 231 SMART lim_4 108 160 IPR001781 -
Arst4g03125 231 SMART lim_4 9 61 IPR001781 -
Arst4g03125 231 Pfam LIM domain 10 65 IPR001781 -
Arst4g03125 231 Pfam LIM domain 109 164 IPR001781 -
Arst4g03125 231 ProSitePatterns LIM zinc-binding domain signature. 10 44 IPR001781 -
Arst4g03125 231 ProSiteProfiles LIM domain profile. 8 68 IPR001781 -
Arst4g03125 231 MobiDBLite consensus disorder prediction 179 231 - -
Arst4g03125 231 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 101 134 - -
Arst4g03125 231 PANTHER OS06G0237300 PROTEIN 6 108 - -
Arst4g03125 231 MobiDBLite consensus disorder prediction 202 231 - -
Arst4g03125 231 Coils Coil 199 231 - -
Arst4g03125 231 Gene3D Cysteine Rich Protein 5 101 - -
Arst4g03125 231 FunFam LIM domain and actin-binding 1 4 74 - -
Arst4g03125 231 ProSiteProfiles LIM domain profile. 107 167 IPR001781 -
Arst4g03125 231 FunFam LIM domain and actin-binding 1 103 173 - -
Arst4g03125 231 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 135 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03125 Arst-Chr4 107896284 107898373 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LIM Arst4g03125 LIM 3.4e-10 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03125 - K09377 gmx:100779513 340.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g03125 4 107896284 107898373 Arst4g03125 4 107896284 107898373 ECH