Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03115 GTGGATACCTTTTTGGATTATGATAATTTATCAAAGGGAATTGTCTTTACTACAGATCGGCCGTATCAACCAGGTGAGCAGGTGTTCATTTCATATGGAAAAAAATCAAATGGGGAGCTTCTATTATCGTATGGGTTTGTTCCAAGGGAAGGCGCCAATCCTTGTGATTCAGTTGAGTTGTCAGTGTCACTCAAGAAATCTGATAAATCCTACAAGGAGAAATTAGAACTCTTGAAGAAGTATGGATTATCAGGATCTCAATGTTTTCCAATACAGATTACTGGTTGGCCATTGGAGTTAATGGCTTATGCTTATTTAGCTGTTAGTCCTTCAAGCATGAGAGCGCAATTTGAAGAGATGGCTGCGGCAGCATCGAATAAAACTACCATCAAGAAAGATTCAAGATATCCTGAAATAGAGGAGCAAGCATTGCAGTTCATACTTGACAGTTGCGAATCCAGTATATCGAAATACAACAATTTCTTACAGGCAAGTGGATCTCTGGATTTAGATGTAACTTCTCCGAAACAACTCAACCGTAGACTTTTTCTGAAACAGCTCGCGGTGGACTTGTGTACAAGCGAGCGAAGGATATTATTTCGTACTCAATATATACTGAGAAGAAGACTGAGGGATATGAGGGCTGGTGAATTAAGAGCTTTAAAAATCTTTGATGGGCTCCGAAATCTTTTCCAATGA 699 0.3934 MSIQRVEVGERGLVASKNIRKGEKLLFVPPALVITEDSEWTCPEAAAILKKNSVPDWPLLATYLISEASFMKSSRWSNYISALPRQPYSLLYWSQAELDRYLEASQIRERAVDRINNVIGTYNDLRLRIFSKHPDLFPEELFNIESFKWSFGILFSRLVRLPSMDGRVALVPWADMLNHSCDVDTFLDYDNLSKGIVFTTDRPYQPGEQVFISYGKKSNGELLLSYGFVPREGANPCDSVELSVSLKKSDKSYKEKLELLKKYGLSGSQCFPIQITGWPLELMAYAYLAVSPSSMRAQFEEMAAAASNKTTIKKDSRYPEIEEQALQFILDSCESSISKYNNFLQASGSLDLDVTSPKQLNRRLFLKQLAVDLCTSERRILFRTQYILRRRLRDMRAGELRALKIFDGLRNLFQ 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03115 414 Pfam SET domain 11 215 IPR001214 GO:0005515
Arst4g03115 414 Gene3D - 234 403 IPR036464 -
Arst4g03115 414 SMART set_7 1 221 IPR001214 GO:0005515
Arst4g03115 414 Pfam Rubisco LSMT substrate-binding 248 381 IPR015353 -
Arst4g03115 414 CDD SET_RBCMT 4 229 IPR044431 GO:0016279|GO:0018022
Arst4g03115 414 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 245 410 IPR036464 -
Arst4g03115 414 Gene3D set domain protein methyltransferase, domain 1 1 228 - -
Arst4g03115 414 FunFam Rubisco methyltransferase family protein 234 397 - -
Arst4g03115 414 SUPERFAMILY SET domain 4 231 IPR046341 -
Arst4g03115 414 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 9 355 - -
Arst4g03115 414 ProSiteProfiles SET domain profile. 1 215 IPR001214 GO:0005515
Arst4g03115 414 FunFam Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 1 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03115 Arst-Chr4 107553288 107555468 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Arst4g03115 SET 1.2e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03115 - - adu:107485637 797.349