Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03104 ATGGACGGAAGGGTTGCCTTGGTTCCTTGGGCAGATATGTTGAATCATAGTTGTGATGTGGATACCTTTTTGGATTATGATAATTTATCAAAGGGAATTGTCTTTACTACAGATCGGCCGTATCAACCAGGTGAGCAGGTGTTCATTTCATATGGAAAAAAATCAAATGGGGAGCTTCTATTATCGTATGGGTTTGTTCCAAGGGAAGGCGCCAATTCTTGTGATTCAATTGAGTTGTCAGTGTCACTCAAGAAATCTGATAAATCCTACAAGGAGAAATTAGAACTCTTGAAAAAGTATGGATTATCAGGATCTCAATGTTTTCCAATACAGATTACTGGTTGGCCATTGGAGTTAATGGCTTATGCTTATTTAGCTGTTAGTCCTCCAAACATGTGA 399 0.386 MDGRVALVPWADMLNHSCDVDTFLDYDNLSKGIVFTTDRPYQPGEQVFISYGKKSNGELLLSYGFVPREGANSCDSIELSVSLKKSDKSYKEKLELLKKYGLSGSQCFPIQITGWPLELMAYAYLAVSPPNM 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03104 132 Pfam SET domain 8 52 IPR001214 GO:0005515
Arst4g03104 132 Gene3D - 71 132 IPR036464 -
Arst4g03104 132 Gene3D set domain protein methyltransferase, domain 1 1 65 - -
Arst4g03104 132 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 5 129 - -
Arst4g03104 132 SUPERFAMILY SET domain 4 68 IPR046341 -
Arst4g03104 132 ProSiteProfiles SET domain profile. 1 52 IPR001214 GO:0005515
Arst4g03104 132 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 82 129 IPR036464 -
Arst4g03104 132 Pfam Rubisco LSMT substrate-binding 85 128 IPR015353 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03104 Arst-Chr4 107349830 107351064 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Arst4g03104 Rubis-subs-bind 1.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03104 - - adu:107485637 240.35