Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03075 ATGGCAGAAACTGAGGATAAGAAACATGCTCCTCCTCCACCACCACCAACAGCAACAACTGAAGAGGCCGCCATCGCAGCCGCCGCGACCACCAACAACATAGGTCAACAAGCAAACAATAAATCCAGCAGCAACAACATGGTAAGAAGGTTCATAGGGGTGAGGCAAAGGCCCTCAGGGAGATGGGTGGCAGAGATTAAAGACTCATCTCAGCATGTGAGATTATGGCTTGGTACCTATGATTCACCTGAACAGGCTGCTAGGGCTTATGATGAAGCTGCTAGAGCACTTCGTGGTGACAATGCAAGAACCAACTTTGCACCACCCTCGTCTTCGTCATCACCACCACTACCTCCTCCATCTCCAGGAAATAATAACAATAATAAGCATGGATTAAGCTTTGCCTCATTGAAAGCAAAGTTGAGCAAGAACTTGCAAAGCATCATGGCAAGGGCTAATCACAACAACAAATCTTCATCATCAAAGAGTAGAGTGAGTGATCATTTCACCTTTGCTAGCATATTCAATCGCAACAGGAACAATAATCATCATCAACAACATGCTCCTCCTCCTCCTATGGTAATAGATGTTAAGAACATTGACAAAGTGGTGCAACCTAGCATCATAGTACCACCACACAAGGACCAACATCATCAACATTATTATGAGCCTAATAACAACAACAACTGGGAAACTTCAAGTGTCTCTGATTGTAGCAACGAGTGGATCATAAACAATAATGGGTTGTTCCAAAAACATAGGTTGTTGTTGGATTCATCATCATCAGCAGGTTCTGATAATGATGGTGAGTTTGGTTGTGTTGGTGATCAAGGGGTTTTGGATCAACTAATGGGGTGGGTTGATAGCACTCAGATTAGTAGTAGTGATGAGGGTTTATCATCATCAAGGAGCAAAAGATTCAAGGTAGCTTCTTCAGTTCTTGTGCCACCAACTTTCACTGCTTCTTCTTCTCCTTCTCCTTATTATTATTATGATTGCGCTTCTCCATACACTAGTGCTTCTGGATCTCCATATAATGGTGTTGGTAGTTATTATGGTTATGGTTATGGCTCCCCTAATTACTATGGCTCTCACTATAATAACAGTAACGATAGCAAATAA 1122 0.4242 MAETEDKKHAPPPPPPTATTEEAAIAAAATTNNIGQQANNKSSSNNMVRRFIGVRQRPSGRWVAEIKDSSQHVRLWLGTYDSPEQAARAYDEAARALRGDNARTNFAPPSSSSSPPLPPPSPGNNNNNKHGLSFASLKAKLSKNLQSIMARANHNNKSSSSKSRVSDHFTFASIFNRNRNNNHHQQHAPPPPMVIDVKNIDKVVQPSIIVPPHKDQHHQHYYEPNNNNNWETSSVSDCSNEWIINNNGLFQKHRLLLDSSSSAGSDNDGEFGCVGDQGVLDQLMGWVDSTQISSSDEGLSSSRSKRFKVASSVLVPPTFTASSSPSPYYYYDCASPYTSASGSPYNGVGSYYGYGYGSPNYYGSHYNNSNDSK 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03075 373 MobiDBLite consensus disorder prediction 102 131 - -
Arst4g03075 373 Gene3D AP2/ERF domain 49 108 IPR036955 GO:0003700|GO:0006355
Arst4g03075 373 MobiDBLite consensus disorder prediction 1 20 - -
Arst4g03075 373 Pfam AP2 domain 50 99 IPR001471 GO:0003700|GO:0006355
Arst4g03075 373 ProSiteProfiles AP2/ERF domain profile. 50 107 IPR001471 GO:0003700|GO:0006355
Arst4g03075 373 SUPERFAMILY DNA-binding domain 51 107 IPR016177 GO:0003677
Arst4g03075 373 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 37 224 - -
Arst4g03075 373 PRINTS Ethylene responsive element binding protein signature 51 62 IPR001471 GO:0003700|GO:0006355
Arst4g03075 373 PRINTS Ethylene responsive element binding protein signature 73 89 IPR001471 GO:0003700|GO:0006355
Arst4g03075 373 FunFam ethylene-responsive transcription factor RAP2-11 49 108 - -
Arst4g03075 373 CDD AP2 50 107 IPR001471 GO:0003700|GO:0006355
Arst4g03075 373 SMART rav1_2 50 113 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03075 Arst-Chr4 106900854 106902774 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03075 36 107 AP2-EREBP Transcription Factor Family AT5G19790 62.500 9.97e-26 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Arst4g03075 AP2 2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03075 - K09286 adu:127746683 556.214