Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Arst4g03075 | ATGGCAGAAACTGAGGATAAGAAACATGCTCCTCCTCCACCACCACCAACAGCAACAACTGAAGAGGCCGCCATCGCAGCCGCCGCGACCACCAACAACATAGGTCAACAAGCAAACAATAAATCCAGCAGCAACAACATGGTAAGAAGGTTCATAGGGGTGAGGCAAAGGCCCTCAGGGAGATGGGTGGCAGAGATTAAAGACTCATCTCAGCATGTGAGATTATGGCTTGGTACCTATGATTCACCTGAACAGGCTGCTAGGGCTTATGATGAAGCTGCTAGAGCACTTCGTGGTGACAATGCAAGAACCAACTTTGCACCACCCTCGTCTTCGTCATCACCACCACTACCTCCTCCATCTCCAGGAAATAATAACAATAATAAGCATGGATTAAGCTTTGCCTCATTGAAAGCAAAGTTGAGCAAGAACTTGCAAAGCATCATGGCAAGGGCTAATCACAACAACAAATCTTCATCATCAAAGAGTAGAGTGAGTGATCATTTCACCTTTGCTAGCATATTCAATCGCAACAGGAACAATAATCATCATCAACAACATGCTCCTCCTCCTCCTATGGTAATAGATGTTAAGAACATTGACAAAGTGGTGCAACCTAGCATCATAGTACCACCACACAAGGACCAACATCATCAACATTATTATGAGCCTAATAACAACAACAACTGGGAAACTTCAAGTGTCTCTGATTGTAGCAACGAGTGGATCATAAACAATAATGGGTTGTTCCAAAAACATAGGTTGTTGTTGGATTCATCATCATCAGCAGGTTCTGATAATGATGGTGAGTTTGGTTGTGTTGGTGATCAAGGGGTTTTGGATCAACTAATGGGGTGGGTTGATAGCACTCAGATTAGTAGTAGTGATGAGGGTTTATCATCATCAAGGAGCAAAAGATTCAAGGTAGCTTCTTCAGTTCTTGTGCCACCAACTTTCACTGCTTCTTCTTCTCCTTCTCCTTATTATTATTATGATTGCGCTTCTCCATACACTAGTGCTTCTGGATCTCCATATAATGGTGTTGGTAGTTATTATGGTTATGGTTATGGCTCCCCTAATTACTATGGCTCTCACTATAATAACAGTAACGATAGCAAATAA | 1122 | 0.4242 | MAETEDKKHAPPPPPPTATTEEAAIAAAATTNNIGQQANNKSSSNNMVRRFIGVRQRPSGRWVAEIKDSSQHVRLWLGTYDSPEQAARAYDEAARALRGDNARTNFAPPSSSSSPPLPPPSPGNNNNNKHGLSFASLKAKLSKNLQSIMARANHNNKSSSSKSRVSDHFTFASIFNRNRNNNHHQQHAPPPPMVIDVKNIDKVVQPSIIVPPHKDQHHQHYYEPNNNNNWETSSVSDCSNEWIINNNGLFQKHRLLLDSSSSAGSDNDGEFGCVGDQGVLDQLMGWVDSTQISSSDEGLSSSRSKRFKVASSVLVPPTFTASSSPSPYYYYDCASPYTSASGSPYNGVGSYYGYGYGSPNYYGSHYNNSNDSK | 373 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Arst4g03075 | 373 | MobiDBLite | consensus disorder prediction | 102 | 131 | - | - | |
Arst4g03075 | 373 | Gene3D | AP2/ERF domain | 49 | 108 | IPR036955 | GO:0003700|GO:0006355 | |
Arst4g03075 | 373 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Arst4g03075 | 373 | Pfam | AP2 domain | 50 | 99 | IPR001471 | GO:0003700|GO:0006355 | |
Arst4g03075 | 373 | ProSiteProfiles | AP2/ERF domain profile. | 50 | 107 | IPR001471 | GO:0003700|GO:0006355 | |
Arst4g03075 | 373 | SUPERFAMILY | DNA-binding domain | 51 | 107 | IPR016177 | GO:0003677 | |
Arst4g03075 | 373 | PANTHER | SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR | 37 | 224 | - | - | |
Arst4g03075 | 373 | PRINTS | Ethylene responsive element binding protein signature | 51 | 62 | IPR001471 | GO:0003700|GO:0006355 | |
Arst4g03075 | 373 | PRINTS | Ethylene responsive element binding protein signature | 73 | 89 | IPR001471 | GO:0003700|GO:0006355 | |
Arst4g03075 | 373 | FunFam | ethylene-responsive transcription factor RAP2-11 | 49 | 108 | - | - | |
Arst4g03075 | 373 | CDD | AP2 | 50 | 107 | IPR001471 | GO:0003700|GO:0006355 | |
Arst4g03075 | 373 | SMART | rav1_2 | 50 | 113 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Arst4g03075 | Arst-Chr4 | 106900854 | 106902774 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Arst4g03075 | 36 | 107 | AP2-EREBP Transcription Factor Family | AT5G19790 | 62.500 | 9.97e-26 | 102 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Arst4g03075 | AP2 | 2e-14 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Arst4g03075 | - | K09286 | adu:127746683 | 556.214 |