Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03062 ATGAGTTTTGGGGGGTTCCTTGAGAACAAACAAGGTGGTGGTGGTGCTAGAATGGTAGCTGAAATACCTTACGGCAACGGTTCTTCAAACCACCACCACCACCACCACATGGAAGCAGCAACAGCAGCGACAATAATGGCTTCTGGTGCAATCTCACACCCTCATTTGGCCAAATCCATGTTCAACAACTCACCTGCTCTCTCTCTAGCACTTCAAACAAATATGGATGGGCAAGGGGATGTGATGAACAATAATAACAGGTTGTTGGTGGGTGATAATAATAATAATAACAATCCTAATACTAATAATAATAATAATTATGAGGGAAACATGATGAGCAACAACAATGGTTTGAGAAGGAGCAGGGAAGAAGAGCATGAAAGCAGATCTGGGAGTGATAACATGGACGGTGCCTCAGGTGATGATGATCTTGATGCTGCCGACATCAACAACAACAAACCCAGGAAGAAGCGTTACCACCGACACACCCCTCAGCAAATTCAAGAACTTGAAGCGCTGTTCAAGGAGTGTCCTCACCCTGATGAGAAGCAAAGGCTTGAACTAAGCAAAAGGCTATGCTTGGAAACAAGGCAAGTGAAGTTTTGGTTCCAAAATAGAAGAACTCAAATGAAGACACAATTGGAACGCCATGAGAACACATTACTCCGGCAAGAGAACGATAAGCTTAGAGCAGAAAACATGTCATTGAGGGAAGCAATGAGGAACCCCATTTGCACAAACTGTGGAGGACCAACCATGATTGGTGAAATCTCATTGGAAGAACAGCATCTACGAATCGAAAATGCGAGGTTAAAGGACGAGTTAGACCGGGTGTGCGCACTCGCCGGAAAGTTCTTAGGCCGGCCCATTCCCTCAATTGCCCCTCATCCTCCATTGCCAAACTCAAGCTTAGAGCTTGGAGTTGGAAACAACAATAACAGCAACAATGGAAGCTTTGTTGTGGGTTCAACAATGCCATTAGGGCCTGATTTTGTTGGAATGGGCATTTCATCAAACACCTTAGGGGTGTTATCACCAACACCACCAAGCAGGGGAATTGCAACAACAAATGGGATGAATTCTTCAAATACATCATCTGGGTATGAGAGATCAATGGTTTTGGAGCTTGCATTGGGTGCAATGGATGAGTTGGTGAAGATGGCACAAAGTGGAGAACCACTTTGGATAAGGGGAATGGAAATGGGAGGAAGGGAAGTGTTGAACCATGAAGAGTACAGTAGAACAGTGACACCTTGCATTGGTTTGAGACCCAATGGGTTTGTCTCTGAGGCTTCTAGGGAAACTGCCATTGTCATCATCAATAGCTTGCCTCTTGTTGACACTTTAATGGACTCAAATCGATGGTCAGAAATGTTCCCTTGTATGGTTGCAAGAACTTCTACAACAGAAGTGATATCTAGTGGAATAAATGGAACTAGAAACGGTGCACTTCAACTTATGCAAGCTGAACTGCAAGTGCTTTCACCACTGGTTCCTGTTAGAGAGGTCAATTTTCTAAGATTTTGCAAACAACATGCAGAAGGGGTTTGGGCTGTGGTTGATGTGTCCATAGACACCATTAGAGAACCTTCTTCTGCTGCACCAACTTTTGTTAGCTGTAGAAGACTCCCTTCTGGTTGTGTTATACAAGACATGCCTAATGGTTACTCTAAGGTGACATGGGTGGAGCATGCAGAATATGATGAAAGCCAAATCCACGAGCTGTATAGGCCATTGGTGAGTTCAGGAATGGGGTTTGGTGCACAACGTTGGATTGCAACTCTTCAACGCCAATGCGAGTGCCTAGCCATCTTAATGTCCTCTGCTGTTTCCCCTCCTGAACACTCTGCAATAACATCGAGTGGAAGGCGTAGCATGCTGAAGCTGGCGCAACGCATGACCAACAACTTCTGCGCCGGTGTTTGTGCCTCAACGGTGCACAAATGGAACAAGCTCAATGCCGGCAACTTCGGCGAAGACGTGAGGGTGATGACAAGGAAGAGCCTTGATGATCCCGGGGAGCCTCCTGGGATCGTCCTGAGCGCAGCCACATCCGTGTGGCTGCCAGTCTCGCCCCAGAGGCTCTTTGATTTCCTCCGCGACGAGAGGCTGAGGAGCGAGTGGGACATACTTTCCAATGGCGGACCCATGCAGGAGATGGCTCACATTGCCAAGGGACAAGACCATGGCAACTGTGTTTCACTACTACGAGCCAGTGCTATGAATTCAAATCAGAGTAGCATGTTGATATTGCAAGAGACATGCACAGACGCGTCTGGGTCGCTTGTAGTGTACGCGCCAGTGGACATTCCAGCCATGCATTTGGTCATGAATGGTGGTGACTCGGCTTACGTGGCGCTTTTGCCATCTGGATTCGCCGTTGCACCTGACGGATCCGGTGGCAGAAATGACCACAATACTGTGTCACAATCAGGAGGTGGGTCACTTCTCACGGTGGCATTTCAGATACTCGTGAACAGCCTCCCTACGGCGAAACTCACGGTGGAGTCGGTGGAGACGGTGAACAACCTCATCTCATGTACGGTTCAGAAGATAAAAGCGGCACTTCAATCCGAGGGTTGA 2583 0.4735 MSFGGFLENKQGGGGARMVAEIPYGNGSSNHHHHHHMEAATAATIMASGAISHPHLAKSMFNNSPALSLALQTNMDGQGDVMNNNNRLLVGDNNNNNNPNTNNNNNYEGNMMSNNNGLRRSREEEHESRSGSDNMDGASGDDDLDAADINNNKPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRAENMSLREAMRNPICTNCGGPTMIGEISLEEQHLRIENARLKDELDRVCALAGKFLGRPIPSIAPHPPLPNSSLELGVGNNNNSNNGSFVVGSTMPLGPDFVGMGISSNTLGVLSPTPPSRGIATTNGMNSSNTSSGYERSMVLELALGAMDELVKMAQSGEPLWIRGMEMGGREVLNHEEYSRTVTPCIGLRPNGFVSEASRETAIVIINSLPLVDTLMDSNRWSEMFPCMVARTSTTEVISSGINGTRNGALQLMQAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDTIREPSSAAPTFVSCRRLPSGCVIQDMPNGYSKVTWVEHAEYDESQIHELYRPLVSSGMGFGAQRWIATLQRQCECLAILMSSAVSPPEHSAITSSGRRSMLKLAQRMTNNFCAGVCASTVHKWNKLNAGNFGEDVRVMTRKSLDDPGEPPGIVLSAATSVWLPVSPQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAMNSNQSSMLILQETCTDASGSLVVYAPVDIPAMHLVMNGGDSAYVALLPSGFAVAPDGSGGRNDHNTVSQSGGGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALQSEG 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03062 860 CDD START_ArGLABRA2_like 370 600 - -
Arst4g03062 860 MobiDBLite consensus disorder prediction 118 132 - -
Arst4g03062 860 SUPERFAMILY Bet v1-like 368 601 - -
Arst4g03062 860 Gene3D - 444 599 IPR023393 -
Arst4g03062 860 MobiDBLite consensus disorder prediction 78 117 - -
Arst4g03062 860 ProSiteProfiles 'Homeobox' domain profile. 153 213 IPR001356 GO:0003677
Arst4g03062 860 SUPERFAMILY Homeodomain-like 139 213 IPR009057 -
Arst4g03062 860 Pfam START domain 376 601 IPR002913 GO:0008289
Arst4g03062 860 CDD homeodomain 155 213 IPR001356 GO:0003677
Arst4g03062 860 MobiDBLite consensus disorder prediction 78 163 - -
Arst4g03062 860 FunFam Homeobox-leucine zipper protein HDG1 142 229 - -
Arst4g03062 860 Pfam Homeodomain 156 211 IPR001356 GO:0003677
Arst4g03062 860 ProSitePatterns 'Homeobox' domain signature. 188 211 IPR017970 GO:0000981|GO:0006355
Arst4g03062 860 SUPERFAMILY Bet v1-like 629 853 - -
Arst4g03062 860 Coils Coil 207 242 - -
Arst4g03062 860 ProSiteProfiles START domain profile. 366 604 IPR002913 GO:0008289
Arst4g03062 860 SMART HOX_1 154 217 IPR001356 GO:0003677
Arst4g03062 860 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 153 857 IPR042160 -
Arst4g03062 860 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 153 857 IPR042160 -
Arst4g03062 860 FunFam Homeobox-leucine zipper protein GLABRA 2 375 600 - -
Arst4g03062 860 SMART START_1 375 601 IPR002913 GO:0008289
Arst4g03062 860 Gene3D - 145 229 - -
Arst4g03062 860 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03062 Arst-Chr4 106691847 106701061 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03062 1 859 Homeobox Transcription Factor Family AT3G61150 62.113 0.0 1019
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Arst4g03062 START 4.6e-55 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03062 K09338 - gmx:100783614 1217.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g03062 4 106691847 106701061 Arst4g03062 4 106691847 106701061 ECH