Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03055 ATGAATAATATGATGAGAAAGTTGAAAAGCATTGCTGCTGGCAAGACTTCTCTTCTTCCAGATTCTGATATAGAAGCAACAATAGTGAATGGTAATGGAACAGAAACAGGTCAAATAATCACTACTGCTATTACTGGTCGCGATGGACTATCAAAACAGACAATCTCATACATGGCAGAACGTGTGGTTGGTACCGGTTCTTTTGGTGTTGTTTATCAGGCTAAGTGTGTTGAAACGGGTGAATTAGTTGCAATAAAGAAAGTGTTGCAAGACAAGAGATACAAGAACAGGGAACTGCAAGTGATGAGAATTCTTGACCATACAAATGTTCTTAAACTAAAGCATTGCTTCTATTCAATGGCAAATAAAGATGAATTGTACCTTAATCTTGTTTTGGAGTATGTTCCTGAAACTGTCTATAGAGTCTCAAAGCAATATGTCAGGGTGCACCAACATATGCCTGCAATTTATATTCAACTATATGCATACCAAATATGCCGTGGTTTAAATTATTTGCATCATGTGATCAATGTGTGTCACCGTGACATCAAGCCCCAAAATCTCTTGGTTAACCCCCAAACTCATCAGTTAAAGATATGTGATTTTGGGAGTGCAAAGATGTTGGTGCCTGGTGAACCAAACATATCATACATATGCTCAAGGTATTATAGAGCTCCAGAACTAATATTTGGGGCAACAGAATACACAACCGCCATAGATGTTTGGTCAGCTGGTTGTGTTTTAGCTGAGCTTATGTTAGGACAGCCAATGTTTCCTGGAGAGAGTGGGGTGGATCAATTAGTAGAGATTATTAAGATTTTGGGAACACCAACCAAAGAAGAAATAAAGTGCATGAATCCAAATTACAACGAGTTTAAGTTTCCTCAAATAAAAGCTCATCCATGGCATAAGGTTTTTCCCAAAGCAATGCCTCCTCAAGCAATAGATCTAGTCTCAAGGATGCTTCAATATTCACCTAATCTACGTTGCACTGCTTTGGAAGCGTGTGCTCACCCATTCTTTGATGATCTCCGAAACCCTAACATAACCTTGCCAAATGGGCGACCATTACCACCTTTGTTTGATTTCACAGCTCAAGAACTAGCGGATGCACCTGATGAGTTGCGTCGACGTCTAATTCCAGAGCATGCAAGAAATTAA 1161 0.3936 MNNMMRKLKSIAAGKTSLLPDSDIEATIVNGNGTETGQIITTAITGRDGLSKQTISYMAERVVGTGSFGVVYQAKCVETGELVAIKKVLQDKRYKNRELQVMRILDHTNVLKLKHCFYSMANKDELYLNLVLEYVPETVYRVSKQYVRVHQHMPAIYIQLYAYQICRGLNYLHHVINVCHRDIKPQNLLVNPQTHQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDVWSAGCVLAELMLGQPMFPGESGVDQLVEIIKILGTPTKEEIKCMNPNYNEFKFPQIKAHPWHKVFPKAMPPQAIDLVSRMLQYSPNLRCTALEACAHPFFDDLRNPNITLPNGRPLPPLFDFTAQELADAPDELRRRLIPEHARN 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03055 386 SMART serkin_6 57 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03055 386 Pfam Protein kinase domain 57 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03055 386 FunFam Glycogen synthase kinase-3 beta 41 136 - -
Arst4g03055 386 CDD STKc_GSK3 52 344 IPR039192 -
Arst4g03055 386 ProSiteProfiles Protein kinase domain profile. 57 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03055 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 178 190 IPR008271 GO:0004672|GO:0006468
Arst4g03055 386 SUPERFAMILY Protein kinase-like (PK-like) 56 369 IPR011009 -
Arst4g03055 386 Gene3D Transferase(Phosphotransferase) domain 1 137 385 - -
Arst4g03055 386 ProSitePatterns Protein kinases ATP-binding region signature. 63 87 IPR017441 GO:0005524
Arst4g03055 386 Gene3D Phosphorylase Kinase; domain 1 42 136 - -
Arst4g03055 386 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 23 385 - -
Arst4g03055 386 FunFam Shaggy-related protein kinase kappa 137 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03055 Arst-Chr4 106524916 106529829 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03055 63 344 Core Cell Cycle Gene Families AT1G76540 35.517 6.11e-59 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Arst4g03055 Pkinase 5.1e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03055 K27414 - gmx:100784150 685.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g06156 3 134642506 134646613 Arst4g03055 4 106524916 106529829 PCT