Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03054 ATGGCAGAACGTGTGGTTGGTACCGGTTCTTTTGGTGTTGTTTATCAGGCTAAGTGTGTTGAAACGGGTGAATTAGTTGCAATAAAGAAAGTGTTGCAAGACAAGAGATACAAGAACAGGGAACTGCAAGTGATGAGAATTCTTGACCATACAAATGTTCTTAAACTAAAGCATTGCTTCTATTCAATGGCAAATAAAGATGAATTGTACCTTAATCTTGTTTTGGAGTATGTTCCTGAAACTGTCTATAGAGTCTCAAAGCAATATGTCAGGGTGCACCAACATATGCCTGCAATTTATATTCAACTATATGCATACCAAATATGCCGTGGTTTAAATTATTTGCATCATGTGATCAATGTGTGTCACCGTGACATCAAGCCCCAAAATCTCTTGGTTAACCCCCAAACTCATCAGTTAAAGATATGTGATTTTGGGAGTGCAAAGATGTTGGTGCCTGGTGAACCAAACATATCATACATATGCTCAAGGTATTATAGAGCTCCAGAACTAATATTTGGGGCAACAGAATACACAACCGCCATAGATGTTTGGTCAGCTGGTTGTGTTTTAGCTGAGCTTATGTTAGGACAGCCAATGTTTCCTGGAGAGAGTGGGGTGGATCAATTAGTAGAGATTATTAAGATTTTGGGAACACCAACCAAAGAAGAAATAAAGTGCATGAATCCAAATTACAACGAGTTTAAGTTTCCTCAAATAAAAGCTCATCCATGGCATAAGGTTTTTCCCAAAGCAATGCCTCCTCAAGCAATAGATCTAGTCTCAAGGATGCTTCAATATTCACCTAATCTACGTTGCACTGCTTTGGAAGCGTGTGCTCACCCATTCTTTGATGATCTCCGAAACCCTAACATAACCTTGCCAAATGGGCGACCATTACCACCTTTGTTTGATTTCACAGCTCAAGAACTAGCGGATGCACCTGATGAGTTGCGTCGACGTCTAATTCCAGAGCATGCAAGAAATTAA 990 0.398 MAERVVGTGSFGVVYQAKCVETGELVAIKKVLQDKRYKNRELQVMRILDHTNVLKLKHCFYSMANKDELYLNLVLEYVPETVYRVSKQYVRVHQHMPAIYIQLYAYQICRGLNYLHHVINVCHRDIKPQNLLVNPQTHQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDVWSAGCVLAELMLGQPMFPGESGVDQLVEIIKILGTPTKEEIKCMNPNYNEFKFPQIKAHPWHKVFPKAMPPQAIDLVSRMLQYSPNLRCTALEACAHPFFDDLRNPNITLPNGRPLPPLFDFTAQELADAPDELRRRLIPEHARN 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03054 329 ProSiteProfiles Protein kinase domain profile. 1 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03054 329 ProSitePatterns Protein kinases ATP-binding region signature. 6 30 IPR017441 GO:0005524
Arst4g03054 329 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Arst4g03054 329 Pfam Protein kinase domain 3 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g03054 329 SUPERFAMILY Protein kinase-like (PK-like) 3 312 IPR011009 -
Arst4g03054 329 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Arst4g03054 329 FunFam Glycogen synthase kinase-3 beta 1 79 - -
Arst4g03054 329 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 1 328 - -
Arst4g03054 329 FunFam Shaggy-related protein kinase kappa 80 328 - -
Arst4g03054 329 CDD STKc_GSK3 3 287 IPR039192 -
Arst4g03054 329 Gene3D Transferase(Phosphotransferase) domain 1 80 328 - -
Arst4g03054 329 SMART serkin_6 1 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03054 Arst-Chr4 106524916 106529829 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03054 6 287 Core Cell Cycle Gene Families AT1G76540 35.517 1.29e-59 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Arst4g03054 Pkinase 6.1e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03054 K27414 - gmx:100784150 630.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g03054 4 106524916 106529829 Arst3g06156 3 134642506 134646613 PCT