Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03053 ATCACGAAGCATGTTGAGTCAGCAAATACCATGCTTTCATTTATATGGTGGGTCATTGGGTTCTATTGGGTAACTGCCGGTGGCCAGAATTTGACGAGGGACTCACCTCAGCTTTATTGGATCTGCATTACATTCCTTGCTTTTGATGTTGTGATTGTGCTGCTTTGTGTTGCTGTTGCATGTCTGATTGGTATTGCTGTTTGCTGTTGCCTGCCATGCATACTTGCTATCCTGTATGTTGTAGCAGATCAGGAAGGGGCAACCAAGGAAGAAATTGAGCAGTTGCCAAAATACAAGTTCAGAGTGATAAAGGAATCTAAGAAAGAAGATGATATTCCAGAATCTTCCAAAGGAATAATGATGCAATGCGACAGCGAAGCAACTGCCGAACATGCTATTGCCTTAGAAGATGCAGAATGCTGCATCTGCCTTTCTGCCTATGATGATGGTGCTGAACTCAGAGAACTTCCATGCAACCACCATTTCCATTGCACGTGCATCGACAAATGGCTGCTTCTAAATGCCACCTGTCCTCTCTGCAAGTTAAACATTTTAAGGACTAGTAATCACCACCAAGAAGTTTGA 585 0.4325 MIWIMIMLSRFLHTDDNSITKHVESANTMLSFIWWVIGFYWVTAGGQNLTRDSPQLYWICITFLAFDVVIVLLCVAVACLIGIAVCCCLPCILAILYVVADQEGATKEEIEQLPKYKFRVIKESKKEDDIPESSKGIMMQCDSEATAEHAIALEDAECCICLSAYDDGAELRELPCNHHFHCTCIDKWLLLNATCPLCKLNILRTSNHHQEV 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03053 212 PANTHER TARGET OF ERK KINASE MPK-1 15 204 - -
Arst4g03053 212 SUPERFAMILY RING/U-box 147 204 - -
Arst4g03053 212 ProSiteProfiles Zinc finger RING-type profile. 158 199 IPR001841 -
Arst4g03053 212 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 134 205 IPR013083 -
Arst4g03053 212 Pfam Ring finger domain 157 199 IPR001841 -
Arst4g03053 212 SMART ring_2 158 198 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03053 Arst-Chr4 106499709 106501681 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03053 20 209 C3H Transcription Factor Family AT1G68070 53.927 6.32e-74 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03053 - - adu:107485567 441.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g03053 4 106499709 106501681 Arst4g03053 4 106499709 106501681 ECH