Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03048 ATGAATGGGGGATCTTTGGGCGGCGGGAAGCTGCAGCGGGAATGTAATTTTGATTTGAATGTCGAGGTGTGTGAAGATGTCAAGGAAACCTGCATCAATGTTGCCAATGGAAATGGTATTTATGAGGCAAATGTCATATCGGGTAAGATGGGTCAGCTCCAAGGAGACATGACAAATCTTAATCAGAGATCTATGGAAGTTGATGATGTTCGTAGTGATTTGAATGAGGTTTTCAAAGATTCCACACCAGAGGATGTTCCTGTAATTGTAATATCTGGTCATGAACAGTTCAAAATTTTTCAGGCAAAGTTGCAATTACCCTCTTCTTCCGAAAATTTAAATTCAGATGATGTTCCTGTTCTTGAAGTCTTTTTTATTTATGCTTGTTTAAGGTCATTCAGTACTTTATTATTTTTGAGTCCATTTGAGTTGGAGGATCTTATAGCTGCTTTGAAGTCCAAAACCCCAAGTATATTATTTGATAGCATTCATGTTTCTATTTTGAAAACTCTGAAAAAACATTTGGAATACCTTTCCAATGAGGGTATTCAATTTGCATCTAATTATCTGAGGAATCTTAATTGGAATTTTCTGGACATTTTCACATGA 609 0.3612 MNGGSLGGGKLQRECNFDLNVEVCEDVKETCINVANGNGIYEANVISGKMGQLQGDMTNLNQRSMEVDDVRSDLNEVFKDSTPEDVPVIVISGHEQFKIFQAKLQLPSSSENLNSDDVPVLEVFFIYACLRSFSTLLFLSPFELEDLIAALKSKTPSILFDSIHVSILKTLKKHLEYLSNEGIQFASNYLRNLNWNFLDIFT 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03048 202 ProSiteProfiles DDT domain profile. 117 177 IPR018501 -
Arst4g03048 202 PANTHER PHD FINGER FAMILY PROTEIN 67 200 - -
Arst4g03048 202 SMART testlast3 117 177 IPR018501 -
Arst4g03048 202 Pfam DDT domain 122 173 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03048 Arst-Chr4 106436578 106437694 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g03048 81 202 PHD Transcription Factor Family AT5G12400 52.459 1.00e-33 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Arst4g03048 DDT 4.4e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g03048 - - adu:107485507 404.06