Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g02980 ATGCTCTGTATCTTCCTAAGCATAATATCGACGTTCTTTTACCTTAGGATGGCCAGAAGATATAAGGGACATGCCGTGGGAATCGACCTTGGTACGACTTACTCGTGTGTTGCTGTGTGGCAAGACCAGCAAAGCCGAGTGGAGATCATTCATAATGACCAGGGAAATAGAACAACTCCTTCTTGTGTTGCTTTCACAGATCAGCAGAGGTTGATTGGTGATGCTGCTAAGCACCAGGCTGCTTCTAACCCAACCAACACTGTCTTTGATGCAAAGAGGTTGATTGGTAGAAAATATAACGACCCCATTATTAAGGATGACCTCTTGTTGTGGCCATTTAAGGTCACAGATGGTGTTAATGACAAACCAATGATTGTTGTTACGTATAAGGGTCAGGAAAAAAGTCTTTCTCCGGAAGAAATCTCAGCTATGGTTCTCACAAAGATGCGTGAGATTGCAGAGGCATATCTGGAGTCACATGTAAAGAATGCTGTGATTACTGTGCCTGCTTATTTCAATGACTCTCAGCGCAAAGCTACCAAAGATGCTGGTGCCATTGCTGGCCTCAATGTATTGCGCATAATCAATGAACCCACGGCTGCAGCTATTGCATATGGCCTTGACAAAAGAGCTGATTGTGATGAAAAGAGAAACATTTTCATCTTTGATCTTGGTGGTGGTACTTTCGATGTGTCTCTTCTTACTATTAAAGATAAGGTGTTTGAAGTTAAGGCCACTGCTGGAAACACACACCTTGGTGGAGAAGACTTTGATAACAGAATGGTGAACTACTTTGTGAAGGAGTTCAAAAGAAAGAACAAAGTGGATGTTAGTGGAAACCCAAGAGCATTAAGAAGATTGAGAAGTACATGTGAGAGGGCAAAAAGGGTACTGTCATTCGCAGTTGATACCATTGTTGAAGTAGATGCTTTATCCCAAGGCATTGACTTGTGCTCTTCAATTACTCGAGCTAGATTTGAGGAACTAAACATGGACCTCTTTAAAGAGTGTATGGAAGCAGTTGATAGGTGTCTTACAGATGCTAAGATAGACAAGAATTCTATACATGATGTTGTCCTCGTTGGGGGATCTTCTAGGATTCCCAAAGTGCAGGAGTTATTGCAGAAGTTTTTCAACAGGAAAGATCTCTACAATAGCATTAGTCCTGATGAGGCTGTAGCTTATGGTGCAGCAGTTCAGGCTGCACTATTGAGTGAAGGCATGAAGAATGTTCCAGATATGGTGCTACGTGATGTTACACCATTGTCACTTGGTGTAGCTCTACAAGGAGATATCATGAGTGTAGTGATTCCTAGGAATTCTACTATTCCTATAAAGAAGACAAAAGAATATGTCACAATCCATGATAACCAATACTCTGTACTTGAAGAAGTCTATGAGGGTGAGAGAATGAAAGCCAGTGATAACAACTTGCTGGGCCAGTTCACACTTTCTGGTATTCCTCCTGCTCCTCGAGGCCATCCTATTATGGTAAGCTTTGATATAGATTTTAATGGTATCCTCTGTGTATCTGCTAAGGAAAATACCACTGGCAATAAGAACCAAATTACCATAACCGATGACAAAGGAAGAATGTCAAGTGTAGAAATTGCAAGACTGGTTAGGGAAGCTGAGAAATACAAGGCTGAAGATATGAAGTTTCTTGAAAAGGCTAAAGCTATAAATGCTTTGGATGATTATGTTTACAAAATGGAGAAAGCTTTAAAGGATAAGGGCATTAGTAATAAGCTTTCCCAATATGACAAGAACAATATTAGTAATGCAATCACAAAGGCTAGAACATTTCTTGATGGTGACCAAAAGCAGGAGGAAATAAATGTGATCAAGGTTATGCTAAATGAGGTCAAACGCATCTTTGATCCCATTATGATCAAGATTGGCTAG 1905 0.4052 MLCIFLSIISTFFYLRMARRYKGHAVGIDLGTTYSCVAVWQDQQSRVEIIHNDQGNRTTPSCVAFTDQQRLIGDAAKHQAASNPTNTVFDAKRLIGRKYNDPIIKDDLLLWPFKVTDGVNDKPMIVVTYKGQEKSLSPEEISAMVLTKMREIAEAYLESHVKNAVITVPAYFNDSQRKATKDAGAIAGLNVLRIINEPTAAAIAYGLDKRADCDEKRNIFIFDLGGGTFDVSLLTIKDKVFEVKATAGNTHLGGEDFDNRMVNYFVKEFKRKNKVDVSGNPRALRRLRSTCERAKRVLSFAVDTIVEVDALSQGIDLCSSITRARFEELNMDLFKECMEAVDRCLTDAKIDKNSIHDVVLVGGSSRIPKVQELLQKFFNRKDLYNSISPDEAVAYGAAVQAALLSEGMKNVPDMVLRDVTPLSLGVALQGDIMSVVIPRNSTIPIKKTKEYVTIHDNQYSVLEEVYEGERMKASDNNLLGQFTLSGIPPAPRGHPIMVSFDIDFNGILCVSAKENTTGNKNQITITDDKGRMSSVEIARLVREAEKYKAEDMKFLEKAKAINALDDYVYKMEKALKDKGISNKLSQYDKNNISNAITKARTFLDGDQKQEEINVIKVMLNEVKRIFDPIMIKIG 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g02980 634 Gene3D Actin; Chain A, domain 4 253 336 - -
Arst4g02980 634 FunFam Heat shock protein 70 26 218 - -
Arst4g02980 634 ProSitePatterns Heat shock hsp70 proteins family signature 1. 28 35 IPR018181 -
Arst4g02980 634 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 410 565 IPR029047 -
Arst4g02980 634 FunFam Heat shock 70 kDa 253 336 - -
Arst4g02980 634 Gene3D - 210 384 - -
Arst4g02980 634 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 409 561 IPR029047 -
Arst4g02980 634 Gene3D - 26 402 - -
Arst4g02980 634 PRINTS 70kDa heat shock protein signature 355 371 - -
Arst4g02980 634 PRINTS 70kDa heat shock protein signature 387 407 - -
Arst4g02980 634 PRINTS 70kDa heat shock protein signature 227 237 - -
Arst4g02980 634 PRINTS 70kDa heat shock protein signature 493 509 - -
Arst4g02980 634 PRINTS 70kDa heat shock protein signature 76 84 - -
Arst4g02980 634 PRINTS 70kDa heat shock protein signature 413 432 - -
Arst4g02980 634 PRINTS 70kDa heat shock protein signature 24 37 - -
Arst4g02980 634 PRINTS 70kDa heat shock protein signature 54 66 - -
Arst4g02980 634 PRINTS 70kDa heat shock protein signature 164 184 - -
Arst4g02980 634 PANTHER HEAT SHOCK PROTEIN 70KDA 25 597 IPR013126 GO:0005524|GO:0140662
Arst4g02980 634 Pfam Hsp70 protein 25 622 IPR013126 GO:0005524|GO:0140662
Arst4g02980 634 ProSitePatterns Heat shock hsp70 proteins family signature 2. 221 234 IPR018181 -
Arst4g02980 634 Gene3D - 562 634 IPR029048 -
Arst4g02980 634 FunFam Heat shock 70 kDa protein 407 561 - -
Arst4g02980 634 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 534 631 IPR029048 -
Arst4g02980 634 ProSitePatterns Heat shock hsp70 proteins family signature 3. 358 372 IPR018181 -
Arst4g02980 634 Gene3D - 89 144 - -
Arst4g02980 634 SUPERFAMILY Actin-like ATPase domain 214 405 IPR043129 -
Arst4g02980 634 SUPERFAMILY Actin-like ATPase domain 24 209 IPR043129 -
Arst4g02980 634 FunFam heat shock 70 kDa protein-like 89 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g02980 Arst-Chr4 105264337 105266533 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g02980 17 633 Calmodulin-binding Proteins AT3G12580 65.913 0.0 828