Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g02941 ATGAAGAGCCGCCGTTGTCGTCATCTTCTTGGGCTGTCTCTGCATGTGCCATCCTCACCGTCGTTCATCTGCATCTTGCCATCACCGAACCGCCGTCGTCGTTATCTAGATATTTCAATGGCTGCCGCAGATGTTGAGTTCCGGTGCTTCGTTGGTGGGCTTGCATGGGCCACCGATAACGAAGCTCTAGAGAAAGCTTTCTCTGTCTACGGAGAAATCGTTGAATCGAAGGACCTTATTAACGATCGCGAAACTGGAAGATCTAGAGATTTCAGATTTGTGACATTTGTTTTTGAGCAAGCCATGAGGGATGCGATTGATGGCATGAACGGCTCCAACCTTAACGGTTGTAACATCACTGTCAACGAGACTCAATCCCGTGGAGGTGGCGGAGGTGGTGGCTTCAGAAGCGGAGGCCGCGGTGGATATGGTGGTGGCGAATTTAGCCGTGGCGGCGGCGGTGGATACAGAGGCGGGACCATCATGAAGATAGATACAACAGAAACGGTGATGGCAGCAGTGACTACGGAGAAAAAGATGTGA 543 0.5138 MKSRRCRHLLGLSLHVPSSPSFICILPSPNRRRRYLDISMAAADVEFRCFVGGLAWATDNEALEKAFSVYGEIVESKDLINDRETGRSRDFRFVTFVFEQAMRDAIDGMNGSNLNGCNITVNETQSRGGGGGGGFRSGGRGGYGGGEFSRGGGGGYRGGTIMKIDTTETVMAAVTTEKKM 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g02941 180 SMART rrm1_1 48 122 IPR000504 GO:0003723
Arst4g02941 180 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 50 119 IPR000504 GO:0003723
Arst4g02941 180 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 47 126 IPR000504 GO:0003723
Arst4g02941 180 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN RZ1A 44 162 - -
Arst4g02941 180 SUPERFAMILY RNA-binding domain, RBD 47 157 IPR035979 GO:0003676
Arst4g02941 180 MobiDBLite consensus disorder prediction 125 149 - -
Arst4g02941 180 Gene3D - 30 160 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g02941 Arst-Chr4 104498646 104499631 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g02941 50 106 C2H2 Transcription Factor Family AT2G19380 40.351 3.30e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g02941 - K13195 ahf:112791882 147.132