Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g02935 ATGAGTGCAAGGACAAGCCGCGGCGGCGGTAGCAGTGGCGCTAGTGGGAGTGGTACCATGGGTAAGGGTAGTGGCGGTCCTTGCGGTGCTTGCAAGTTTCTGAGGAAGAAATGTGATCCGGGATGTGTCTTTGCTCCGTACTTCGATCCTGATCAAGGTGCAATCTACTTTGCATCGGTGCACAAGGTTTTTGCTAGCAACGTTGGTAAGCTTCTTTCCAAAATTCCAGTTCATAAGAGGCTTGATGCTGTTATTAGTATTTGTTATGAAGCACAAGCACGAATGAGAGACCCTGTTTATGGATGTGTTGGTCAAATCTGTACCCTTCAACAACAGGTGTTGGCTTTACAAGCCGAACTCTCATTCTTACAAAATCATCTTGCTACAATGGAGATACGACAACCGCCACCAATTTTTCCAACGCAAGGAGTGCCGACATCACCTATTTTCTCAGTTGCAGACTTACCAACGGTTGTGGGTGTTGCCCCCACCACCTTATCAATGCCGGCCACTTTTGATCCACCTTCCCACTTTGATCCAGCAACTTGGGCTATGTATCAACGGGCCATGATGGACCCACGGCAATACATGGCTGTTTCAAGCCCAATAGGCCCAACTGCTAGTGGTGATGTTGATCTCCAAACAGTTGCATGTGAGCTCATCAATAGGCACGTACCTCTGCAAGCACTACCTCAGACTTCTGGTTCCAATGCTGCATCGACGTCAGCTCCATCACTTAGTTCTTCTAAGTGA 753 0.4821 MSARTSRGGGSSGASGSGTMGKGSGGPCGACKFLRKKCDPGCVFAPYFDPDQGAIYFASVHKVFGXSNVGKLLSKIPVHKRLDAVISICYEAQARMRDPVYGCVGQICTLQQQVLALQAELSFLQNHLATMEIRQPPPIFPTQGVPTSPIFSVADLPTVVGVAPTTLSMPATFDPPSHFDPATWAMYQRAMMDPRQYMAVSSPIGPTASGDVDLQTVACELINRHVPLQALPQTSGSNAASTSAPSLSSSK 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g02935 251 ProSiteProfiles LOB domain profile. 26 128 IPR004883 -
Arst4g02935 251 Pfam Lateral organ boundaries (LOB) domain 27 125 IPR004883 -
Arst4g02935 251 MobiDBLite consensus disorder prediction 232 251 - -
Arst4g02935 251 PANTHER LOB DOMAIN CONTAINING PROTEIN 23 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g02935 Arst-Chr4 104286952 104303552 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g02935 30 224 AS2 family AT2G45420 50.490 2.06e-62 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Arst4g02935 LOB 6.4e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g02935 K21994 - pvy:116128124 235.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g02935 4 104286952 104303552 Arst4g02935 4 104286952 104303552 ECH
Arst4g02935 4 104286952 104303552 Arst2g02946 2 87050099 87056002 PCT