Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g02930 ATGGAGGCAAGAGAAGCTATTAGCTCTGGGGTTACGGTGATAGGGGCGGAAGCTCCCTCTGCATACCATGTGGCACCAAGGAGTGAAGCTCCGAGCCAAGTTCCTGGCCCGGATGCAGCTGCTAATGCTGCTCTTGGTGTTTCGCCCGTGAGTGTGGGATTGGATGGAACAACAGTTAAGAAAAAACGTGGTAGGCCAAGGAAGTATGGACCGGATGGATCGGTTAATATGGCATTGTCACCATTGCCAATTTCTTCTTCGGCTCCGTCTTCTAACGAATTTTCGAGCTTCCATTCAAGTGGCAAGCGAGGGAAATCGCGGGGTATGGAGTACAAGCACTCAAAGAAATTCGGAGGAGGGGATATTCTAGGAGATTCCATGGGTACAAGCTTTATGCCCCATATCATTACTGTCAATGCTGGCGAGGACATCACAATGAAGGTTATATCGTTTTCTCAACAAGGACCACGAGCTATATGCATACTATCTGCTACTGGTGTAATTTCAAATGTTACGCTTCGCCAGCCTGATTCTTCAGGAGGAACTTTGACCTATGAGGGTCGTTTCGAGATACTTTCCTTGACTGGATCATTTATGCCTACTGACAACGAAGGAACGAGAAGCCGGTCAGGTGGGATGAGTGTCACCTTGTCCAGCCCTGATGGCCGTGTCTTAGGTGGTGGCGTTGCTGGTCTTCTTGTAGCTGCCAGTCCTGTGCAGGTGGTTGTTGGAAGTTTTCTGCCAAGCAACCAGCAAGATCCGAAACCAAAGAAGCAGAAGCATGATTACGCACCACCACCAGCAGTTAACCCCCCCGCCGTTGCAGTGTCCTCTGCGCCACCACCCTCAACTAATGGCGATAAAGAGGATGTCATGGGTGGGCACGTGATGCAACACAATCCCGGAGCCTTCAACTCTAGCCTCACTCCTCCCTCGGCCTTCCGAAGGGACAGCTGGGTTAACATGCATTCCATGCCGGACTCGATTAAATCCACCACGGATATTAACATATCTTTGCCTGATGATTGA 1029 0.5024 MEAREAISSGVTVIGAEAPSAYHVAPRSEAPSQVPGPDAAANAALGVSPVSVGLDGTTVKKKRGRPRKYGPDGSVNMALSPLPISSSAPSSNEFSSFHSSGKRGKSRGMEYKHSKKFGGGDILGDSMGTSFMPHIITVNAGEDITMKVISFSQQGPRAICILSATGVISNVTLRQPDSSGGTLTYEGRFEILSLTGSFMPTDNEGTRSRSGGMSVTLSSPDGRVLGGGVAGLLVAASPVQVVVGSFLPSNQQDPKPKKQKHDYAPPPAVNPPAVAVSSAPPPSTNGDKEDVMGGHVMQHNPGAFNSSLTPPSAFRRDSWVNMHSMPDSIKSTTDINISLPDD 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g02930 342 ProSiteProfiles PPC domain profile profile. 128 267 IPR005175 -
Arst4g02930 342 FunFam AT-hook motif nuclear-localized protein 1-like 133 263 - -
Arst4g02930 342 MobiDBLite consensus disorder prediction 24 110 - -
Arst4g02930 342 Gene3D - 133 262 - -
Arst4g02930 342 SUPERFAMILY AF0104/ALDC/Ptd012-like 130 249 - -
Arst4g02930 342 CDD DUF296 133 246 IPR005175 -
Arst4g02930 342 MobiDBLite consensus disorder prediction 79 102 - -
Arst4g02930 342 Pfam Plants and Prokaryotes Conserved (PCC) domain 133 246 IPR005175 -
Arst4g02930 342 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 30 305 IPR039605 GO:0003680
Arst4g02930 342 MobiDBLite consensus disorder prediction 247 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g02930 Arst-Chr4 104129250 104133038 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g02930 10 263 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 57.394 1.69e-94 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g02930 - - gmx:100777213 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g02930 4 104129250 104133038 Arst4g02930 4 104129250 104133038 ECH
Arst4g02930 4 104129250 104133038 Arst2g02943 2 86962020 86965800 PCT