Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g02876 ATGAGCACAACCAGCACGGGTACTATGATTCCAAATAGGAGAAGGATACATGGATATGTTTTGGCTGTTTCATTTTGTTATTTAATTTCCACAACAGTGGCACAGAGCACACACCCCTCAGAAGTGAATGCATTGTTACAAATCAAGAAAAGTTTGATTGATCCCTTAAACCATTTGTGGAACTGGAACAAAGGTGATCCATGTACATCAAATTGGAATGGTGTCTTGTGTCCTCTGAATGTTGGGGCTGATGGTCATTTCCATGTCAAAGAGCTCTACTTAATGACTATGAATCTCTCTGGAAATTTGGTACCCCAACTTGGTCAGCTATCTCAACTAGAGATAATGAACTTCATGTGGAATAACATAACAGGAAGTATACCCAGGGAGATAGGAAACATCACATCATTAAGACTCTTGCTCCTGAATGGAAATGCACTATCAGGTAATTTACCATATGAGCTTGGCAATCTTCAAAATCTAAACAGATTTCAAGTTGACCAAAACCAGCTCTCCGGTCCAATACCGCCTTCATTCGCCAACTTGAGCTCTGTCAAGCACATCCACATGAACAACAACTCATTTAGTGGTCAAATTCCTCCCAATCTTTCAAACCTATCCAACCTCCTTCACTTGCTTCTGGATACCAATAATTTATCTGGCTATCTTCCACCAGAATTCTCCATGTTACCCCAGCTGCGGATACTCCAACTTGATAACAATCACTTCACAGGGAGCAGAGTTCCTTCTTCCTATGCAAACTTATCTAGACTAGCAAAATTAAGTCTCAGAAACTGCAGTTTGCTAGGAGAAGTGCCTGATCTCAGTTCAATACCACAGCTTTACTATCTAGATCTTAGCTGGAACAATCTTATTGGACCCATACCATCGAAAAAACTTGCTGAAAATATGACTACCATTGATCTTTCTAATAACAATCTGAATGGATCAATTCCTGGATACTTCTCAGAGCTACCTTCTCTTCAAAGATTGTCTCTTGAGAACAACAACTTTTCAGGATCAATCTCTGCTAAGATATGGCAGAAGATGACTCTCACTACTAATGCTAAATTAACAATCGACCTACGAAACAACTCACTTTCAAGAATTTTGGGAGATCCGAGTCCTCCGCCAAACGTCACCTTAAGGCTTGGAGGAAATCCTATATGTAAGAGTTCTCAAACTAGTGGAATATTGGCCAAACAATGTGGATTTGAAGGAGAAGAAGAAGACAATTACTTAACAAATTCAACAACTACATGTCCCCCTCAAGCTTGTTCAGTGAATGATTTCTTTGAATATGTCCCAGATTCACCTATTCCTTGCTTTTGTGCATCACCTCTTAGAATTGGATACCGGCTGAAAAGCCCGAGTTTTTCTTTCTTCCCACCATACAAAGCTTCATTTAGATCATATGTTACCCATGCTTTGAACTTGGACTTCTATCAGCTATCAATAGATTCATATTCTTGGGAAGAAGAAGAAACTCGTCTTAGGATGTATTTGAAACTCTTTCCTGAGGCTAGTTATTCACACAATGAGTTCAATTCATCTGAGGTCTATCGAATGCGAAGCATATTCTCATCATGGAATTTTGGTGGAAGTGATTTTTATGGGCCATATGAACTTTTGAATTTCACCCTTGAGGGACCTTATGCATATTTAATTGCAAAATCAGAAAAGAGCAAAAGTAGCAGATTGGAAATAATTTTTGCTGTAGTAGCAGCTGTGGCAGTTGTTATAGCAATCTCAGCAATAGTAACTCTCATTATTCTAAGAAGAGATATCAAAAACCAGGACACATTTTCGAGAAGACGTCGCTCCTCTAGTATTCCTATCAAAATAGATGGTGTAAAAGAATTCACTTTCAAAGAAATGGTTCTTGCCACTGATAGTTTTAGCAGTTCGAATCAAGTCGGCCGAGGAGGTTATGGAACCGTTTATAAAGGCACTCTACCTGATGAAACAATTGTTGCCATAAAGAGAGCACAAGAAGATTCCCTACAAGGAACAAGGGAATTCTTGAATGAGATTGAACTATTATCGAGGTTACATCATCGAAATCTAGTCTCCTTGATTGGATATTGTGATCAAGAAGGGGAGCAGATGCTTGTTTATGAATTTATGCCTAATGGCAACTTACGCGATTGGCTTTCAGGCACAAAGGGAAACTTAACATTTGGTATGAGATTGCGCATCGCGATTGGTTCAGCCAAAGGAATACTATATCTGCATACTGAGGCGAATCCTCCGATATTCCATCGAGATATCAAAGCATCAAACATACTCCTAGACTCCAAGATGATTGCTAAAGTTGCAGATTTTGGACTGTCGCGGCTTGCACCACTGCTAGATGAAGGGAATGAACCTAAATATGTGTCAACAGTTGTGAAGGGAACGCCAGGTTATCTGGATCCAGAGTACTTGTTAACTCATAAATTGACAGATAAGAGCGATGTCTATAGTCTTGGAGTTGTGTTTATGGAGCTTTTGACTGGCATGCAGCCAATATCACATGGGAAAAACATTGTTCGCGAGGTGAATATGGCTTATAATTCAGGCATGATATTTTCCATCATAGACAGTAAAATGGGTTCCTACCCCTCAGATTGTATTGAGAGATTCTCAACTCTGGCCATAAATTGTTGCCATGATGTTACTCAGAAGAGACCATCAATGCTTGATGTTGTGAGGGAGCTTGAAAACATCGCCGCAATGCTGCCGGGAACAGAAACTTCTTTCTCAGATATCATTTGCCATAATGACAGTTCAGTGCAATCATCATCATCATCATCATTCATGCCAAGTAAGGACCATCATGGATCTTCATCTGCTTCAGAAATTTGCCTTGTTAGTGGTGCCATTTCAACAATACTTCCACGTTGA 2886 0.3967 MSTTSTGTMIPNRRRIHGYVLAVSFCYLISTTVAQSTHPSEVNALLQIKKSLIDPLNHLWNWNKGDPCTSNWNGVLCPLNVGADGHFHVKELYLMTMNLSGNLVPQLGQLSQLEIMNFMWNNITGSIPREIGNITSLRLLLLNGNALSGNLPYELGNLQNLNRFQVDQNQLSGPIPPSFANLSSVKHIHMNNNSFSGQIPPNLSNLSNLLHLLLDTNNLSGYLPPEFSMLPQLRILQLDNNHFTGSRVPSSYANLSRLAKLSLRNCSLLGEVPDLSSIPQLYYLDLSWNNLIGPIPSKKLAENMTTIDLSNNNLNGSIPGYFSELPSLQRLSLENNNFSGSISAKIWQKMTLTTNAKLTIDLRNNSLSRILGDPSPPPNVTLRLGGNPICKSSQTSGILAKQCGFEGEEEDNYLTNSTTTCPPQACSVNDFFEYVPDSPIPCFCASPLRIGYRLKSPSFSFFPPYKASFRSYVTHALNLDFYQLSIDSYSWEEEETRLRMYLKLFPEASYSHNEFNSSEVYRMRSIFSSWNFGGSDFYGPYELLNFTLEGPYAYLIAKSEKSKSSRLEIIFAVVAAVAVVIAISAIVTLIILRRDIKNQDTFSRRRRSSSIPIKIDGVKEFTFKEMVLATDSFSSSNQVGRGGYGTVYKGTLPDETIVAIKRAQEDSLQGTREFLNEIELLSRLHHRNLVSLIGYCDQEGEQMLVYEFMPNGNLRDWLSGTKGNLTFGMRLRIAIGSAKGILYLHTEANPPIFHRDIKASNILLDSKMIAKVADFGLSRLAPLLDEGNEPKYVSTVVKGTPGYLDPEYLLTHKLTDKSDVYSLGVVFMELLTGMQPISHGKNIVREVNMAYNSGMIFSIIDSKMGSYPSDCIERFSTLAINCCHDVTQKRPSMLDVVRELENIAAMLPGTETSFSDIICHNDSSVQSSSSSSFMPSKDHHGSSSASEICLVSGAISTILPR 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g02876 961 SMART serkin_6 633 907 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g02876 961 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 39 200 - -
Arst4g02876 961 ProSitePatterns Serine/Threonine protein kinases active-site signature. 752 764 IPR008271 GO:0004672|GO:0006468
Arst4g02876 961 Gene3D Phosphorylase Kinase; domain 1 604 708 - -
Arst4g02876 961 Gene3D Ribonuclease Inhibitor 38 194 IPR032675 -
Arst4g02876 961 Pfam Leucine rich repeat N-terminal domain 39 77 IPR013210 -
Arst4g02876 961 Gene3D Transferase(Phosphotransferase) domain 1 709 915 - -
Arst4g02876 961 ProSiteProfiles Protein kinase domain profile. 633 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g02876 961 ProSitePatterns Protein kinases ATP-binding region signature. 639 661 IPR017441 GO:0005524
Arst4g02876 961 Pfam Protein tyrosine and serine/threonine kinase 636 900 IPR001245 GO:0004672|GO:0006468
Arst4g02876 961 SUPERFAMILY Protein kinase-like (PK-like) 618 935 IPR011009 -
Arst4g02876 961 Pfam Leucine rich repeat 279 338 IPR001611 GO:0005515
Arst4g02876 961 Gene3D Ribonuclease Inhibitor 195 404 IPR032675 -
Arst4g02876 961 PANTHER RECEPTOR-LIKE PROTEIN 55 48 904 - -
Arst4g02876 961 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 709 916 - -
Arst4g02876 961 FunFam Leucine-rich repeat protein kinase family protein 597 708 - -
Arst4g02876 961 SUPERFAMILY L domain-like 53 391 - -
Arst4g02876 961 CDD STKc_IRAK 639 903 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g02876 Arst-Chr4 102923340 102931217 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g02876 14 912 Receptor kinase-like Gene Family AT5G01950 60.509 0.0 1060
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Arst4g02876 PK_Tyr_Ser-Thr 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g02876 - - gmx:100815005 1214.52