Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g02875 ATGAGCACAACCAGCACGGGTACTATGATTCCAAATAGGAGAAGGATACATGGATATGTTTTGGCTGTTTCATTTTGTTATTTAATTTCCACAACAGTGGCACAGAGCACACACCCCTCAGAAGTGAATGCATTGTTACAAATCAAGAAAAGTTTGATTGATCCCTTAAACCATTTGTGGAACTGGAACAAAGGTGATCCATGTACATCAAATTGGAATGGTGTCTTGTGTCCTCTGAATGTTGGGGCTGATGGTCATTTCCATGTCAAAGAGCTCTACTTAATGACTATGAATCTCTCTGGAAATTTGGTACCCCAACTTGGTCAGCTATCTCAACTAGAGATAATGAACTTCATGTGGAATAACATAACAGGAAGTATACCCAGGGAGATAGGAAACATCACATCATTAAGACTCTTGCTCCTGAATGGAAATGCACTATCAGGTAATTTACCATATGAGCTTGGCAATCTTCAAAATCTAAACAGATTTCAAGTTGACCAAAACCAGCTCTCCGGTCCAATACCGCCTTCATTCGCCAACTTGAGCTCTGTCAAGCACATGTTAGTCCATTTTCTTACCGCCTTCATTCGCCGACTTGTGCATTTGTTATGCTTTATTTGTTTGTGTTCTTGCAGCCACATGAACAACAACTCATTTAGTGGTCAAATTCCTCCCAATCTTTCAAACCTATCCAACCTCCTTCACTTGCTTCTGGATACCAATAATTTATCTGGCTATCTTCCACCAGAATTCTCCATGTTACCCCAGCTGCGGATACTCCAACTTGATAACAATCACTTCACAGGGAGCAGAGTTCCTTCTTCCTATGCAAACTTATCTAGACTAGCAAAATTAAGTCTCAGAAACTGCAGTTTGCTAGGAGAAGTGCCTGATCTCAGTTCAATACCACAGCTTTACTATCTAGATCTTAGCTGGAACAATCTTATTGGACCCATACCATCGAAAAAACTTGCTGAAAATATGACTACCATTGATCTTTCTAATAACAATCTGAATGGATCAATTCCTGGATACTTCTCAGAGCTACCTTCTCTTCAAAGATTGTCTCTTGAGAACAACAACTTTTCAGGATCAATCTCTGCTAAGATATGGCAGAAGATGACTCTCACTACTAATGCTAAATTAACAATCGACCTACGAAACAACTCACTTTCAAGAATTTTGGGAGATCCGAGTCCTCCGCCAAACGTCACCTTAAGGCTTGGAGGAAATCCTATATGTAAGAGTTCTCAAACTAGTGGAATATTGGCCAAACAATGTGGATTTGAAGGAGAAGAAGAAGACAATTACTTAACAAATTCAACAACTACATGTCCCCCTCAAGCTTGTTCAGTGAATGATTTCTTTGAATATGTCCCAGATTCACCTATTCCTTGCTTTTGTGCATCACCTCTTAGAATTGGATACCGGCTGAAAAGCCCGAGTTTTTCTTTCTTCCCACCATACAAAGCTTCATTTAGATCATATGTTACCCATGCTTTGAACTTGGACTTCTATCAGCTATCAATAGATTCATATTCTTGGGAAGAAGAAGAAACTCGTCTTAGGATGTATTTGAAACTCTTTCCTGAGGCTAGTTATTCACACAATGAGTTCAATTCATCTGAGGTCTATCGAATGCGAAGCATATTCTCATCATGGAATTTTGGTGGAAGTGATTTTTATGGGCCATATGAACTTTTGAATTTCACCCTTGAGGGACCTTATGCATATTTAATTGCAAAATCAGAAAAGAGCAAAAGTAGCAGATTGGAAATAATTTTTGCTGTAGTAGCAGCTGTGGCAGTTGTTATAGCAATCTCAGCAATAGTAACTCTCATTATTCTAAGAAGAGATATCAAAAACCAGGACACATTTTCGAGAAGACGTCGCTCCTCTAGTATTCCTATCAAAATAGATGGTGTAAAAGAATTCACTTTCAAAGAAATGGTTCTTGCCACTGATAGTTTTAGCAGTTCGAATCAAGTCGGCCGAGGAGGTTATGGAACCGTTTATAAAGGCACTCTACCTGATGAAACAATTGTTGCCATAAAGAGAGCACAAGAAGATTCCCTACAAGGAACAAGGGAATTCTTGAATGAGATTGAACTATTATCGAGGTTACATCATCGAAATCTAGTCTCCTTGATTGGATATTGTGATCAAGAAGGGGAGCAGATGCTTGTTTATGAATTTATGCCTAATGGCAACTTACGCGATTGGCTTTCAGGCACAAAGGGAAACTTAACATTTGGTATGAGATTGCGCATCGCGATTGGTTCAGCCAAAGGAATACTATATCTGCATACTGAGGCGAATCCTCCGATATTCCATCGAGATATCAAAGCATCAAACATACTCCTAGACTCCAAGATGATTGCTAAAGTTGCAGATTTTGGACTGTCGCGGCTTGCACCACTGCTAGATGAAGGGAATGAACCTAAATATGTGTCAACAGTTGTGAAGGGAACGCCAGGTTATCTGGATCCAGAGTACTTGTTAACTCATAAATTGACAGATAAGAGCGATGTCTATAGTCTTGGAGTTGTGTTTATGGAGCTTTTGACTGGCATGCAGCCAATATCACATGGGAAAAACATTGTTCGCGAGGTGAATATGGCTTATAATTCAGGCATGATATTTTCCATCATAGACAGTAAAATGGGTTCCTACCCCTCAGATTGTATTGAGAGATTCTCAACTCTGGCCATAAATTGTTGCCATGATGTTACTCAGAAGAGACCATCAATGCTTGATGTTGTGAGGGAGCTTGAAAACATCGCCGCAATGCTGCCGGGAACAGAAACTTCTTTCTCAGATATCATTTGCCATAATGACAGTTCAGTGCAATCATCATCATCATCATCATTCATGCCAAGTAAGGACCATCATGGATCTTCATCTGCTTCAGAAATTTGCCTTGTTAGTGGTGCCATTTCAACAATACTTCCACGTTGA 2961 0.3968 MSTTSTGTMIPNRRRIHGYVLAVSFCYLISTTVAQSTHPSEVNALLQIKKSLIDPLNHLWNWNKGDPCTSNWNGVLCPLNVGADGHFHVKELYLMTMNLSGNLVPQLGQLSQLEIMNFMWNNITGSIPREIGNITSLRLLLLNGNALSGNLPYELGNLQNLNRFQVDQNQLSGPIPPSFANLSSVKHMLVHFLTAFIRRLVHLLCFICLCSCSHMNNNSFSGQIPPNLSNLSNLLHLLLDTNNLSGYLPPEFSMLPQLRILQLDNNHFTGSRVPSSYANLSRLAKLSLRNCSLLGEVPDLSSIPQLYYLDLSWNNLIGPIPSKKLAENMTTIDLSNNNLNGSIPGYFSELPSLQRLSLENNNFSGSISAKIWQKMTLTTNAKLTIDLRNNSLSRILGDPSPPPNVTLRLGGNPICKSSQTSGILAKQCGFEGEEEDNYLTNSTTTCPPQACSVNDFFEYVPDSPIPCFCASPLRIGYRLKSPSFSFFPPYKASFRSYVTHALNLDFYQLSIDSYSWEEEETRLRMYLKLFPEASYSHNEFNSSEVYRMRSIFSSWNFGGSDFYGPYELLNFTLEGPYAYLIAKSEKSKSSRLEIIFAVVAAVAVVIAISAIVTLIILRRDIKNQDTFSRRRRSSSIPIKIDGVKEFTFKEMVLATDSFSSSNQVGRGGYGTVYKGTLPDETIVAIKRAQEDSLQGTREFLNEIELLSRLHHRNLVSLIGYCDQEGEQMLVYEFMPNGNLRDWLSGTKGNLTFGMRLRIAIGSAKGILYLHTEANPPIFHRDIKASNILLDSKMIAKVADFGLSRLAPLLDEGNEPKYVSTVVKGTPGYLDPEYLLTHKLTDKSDVYSLGVVFMELLTGMQPISHGKNIVREVNMAYNSGMIFSIIDSKMGSYPSDCIERFSTLAINCCHDVTQKRPSMLDVVRELENIAAMLPGTETSFSDIICHNDSSVQSSSSSSFMPSKDHHGSSSASEICLVSGAISTILPR 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g02875 986 Pfam Leucine rich repeat N-terminal domain 39 77 IPR013210 -
Arst4g02875 986 CDD STKc_IRAK 664 928 - -
Arst4g02875 986 ProSiteProfiles Protein kinase domain profile. 658 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g02875 986 SUPERFAMILY Protein kinase-like (PK-like) 643 960 IPR011009 -
Arst4g02875 986 Gene3D Ribonuclease Inhibitor 201 412 IPR032675 -
Arst4g02875 986 FunFam Leucine-rich repeat protein kinase family protein 622 733 - -
Arst4g02875 986 Gene3D Ribonuclease Inhibitor 38 199 IPR032675 -
Arst4g02875 986 Pfam Leucine rich repeat 304 363 IPR001611 GO:0005515
Arst4g02875 986 Gene3D Transferase(Phosphotransferase) domain 1 734 940 - -
Arst4g02875 986 ProSitePatterns Protein kinases ATP-binding region signature. 664 686 IPR017441 GO:0005524
Arst4g02875 986 FunFam Nuclear pore complex protein NUP107 38 199 - -
Arst4g02875 986 Pfam Protein tyrosine and serine/threonine kinase 661 925 IPR001245 GO:0004672|GO:0006468
Arst4g02875 986 SUPERFAMILY L domain-like 52 416 - -
Arst4g02875 986 SMART serkin_6 658 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g02875 986 Gene3D Phosphorylase Kinase; domain 1 629 733 - -
Arst4g02875 986 PANTHER RECEPTOR-LIKE PROTEIN 55 48 929 - -
Arst4g02875 986 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 734 941 - -
Arst4g02875 986 ProSitePatterns Serine/Threonine protein kinases active-site signature. 777 789 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g02875 Arst-Chr4 102923340 102931218 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g02875 14 937 Receptor kinase-like Gene Family AT5G01950 58.881 0.0 1045
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Arst4g02875 PK_Tyr_Ser-Thr 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g02875 - - gmx:100815005 1200.65