Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g02847 ATGATGCTACAACATTCAAACATCTTCATAGAACAAGATTTTCTGCTTCTGATTCAGATTCTTGTTCTTGTTCTTCTTCTCTTCCCTCAAACTACAATATCTGATCTACATTCAGAAAAGCAAGCACTCCTTGATTTTGCATCAGCATTTCACCATGGCAAAAAGGTGAATTGGAACATGAACACTTCAATGTGCAATTCATGGAATGGAGTTACCTGCAATCCCAAGGGCACAAATGTAATTTCACTGAGGCTACCAGGTGTTGGTTTGAGAGGTTCTCTGCCACCAAACACAATTGGTAAGCTCAATGGCCTCACAAGTCTTAGTCTAAGGTCTAACACATTGAGTGGCAAAATCCCAAATGACATTCTTGCCCTTCATTCCCTAAGGTTTCTATATCTTCAACATAACAATTTCTCAGGTGAATTTCCAAATTTTCTTCCACCTAGGCTTGTGCTTCTTGATTTGTCACATAACTCTTTCACAGGACAAATTTCAAACTCAATCCAAAATTTGACTAATCTAACTGGTTTGTTCCTCAAGAACAATTCACTTATAGGGCCTATTCCTAATGTAACCCTTCCTAGCCTTAAGGATTTGGATTTGAGCTTTAACAACCTTAATGGTTCAATTCCTTTAGCATTTCATAGGTTTCAATCTTCATCATTTGATGGGAATTTGATGCTATGTGGACCACCTTTGACAAAACAATGTTCCTCATCAAGTCCTCTTAGTAGTCCAATGTTGTCTCCACTAATAGTATCTCAAAATTCAAGTGATGTTTCCAAGAAGAGGCCAATTCTTGGGGTGGTGGTCGCTGCCGCCTTGGGAGGTTTCGGACTACTTTTTCTACTAGTTTTGATGTTGGTGTTGTATTTTCTTAAGAAGAGAGTTGGTGAACAAAATGAGGCACCAAAAGCAAGTAAACTTGGTGAGAATCTTAGGGAGGATTTTGGGAGTGGTGTGCAAGAACCTGAGAAGAACAAGTTGGTATTTTTCGGAGGGTGTTCTTATAACTTTGATCTTGAGGATTTGTTAAGAGCTTCAGCTGAAGTTCTTGGTAAGGGAAGTTGTGGAACAACTTATAAGGCAGTCTTGGAAGAAGGGACAGTAGTTGTTGTTAAGAGGCTGAAGGAAGTTGCAATTGGGAAGAGAGAATTTGAACAGCAAATGGAAACTGTGCAAAAGCTTGATCAGCATCCAAATGTTGTTCCATTTAGTGCTTACTATTATTCCAAGGATGAGAAGCTAGTGGTTTATGATTACCTACCATTTGGAAGCTTTTCCAAGTTATTGCATGGAACAAGGGAAACTGGAAGAACTCCACTAGATTGGGACACCAGATTGAAGATAATGCTTGGAGCTGCTAAGGGTGTTGCTCATATTCATTCTGCAAGTGGAAGGAAATTTGTCCATGGCAATATAAAATCATGTAATGTGCTACTCTTAGGTGATCTACAAGGCTGCATATCGGATTTCGGCTTAGCTCCTCTAGCGAGTTTCTCAGGCTCCTTTAGGAGTCCTGGATATCGAGCCCCCGAGGTTATTGAGACCCAAAAATCCACACAAAAATCTGATGTGTACAGCTTTGGGGTTCTCCTTCTTGAGATGTTGACCGGCAAAACACCGATTCAGTATTCAGGACATGATGATCCGGTTGATCTTCCGAGGTGGGTTCAATCTGTTGTTAGAGAGGAATGGACTGCTGAAGTGTTTGATCTTGAGCTAATGAGGTATCCAAATATTGAGGAAGAATTGGTGCAAATGCTGCAACTTTCAATGGCATGTGTTGCAATGGTTCCTGACACAAGACCCTCAATGGAGGAAGTTGTAAGGGTTATTGAAGAAATCATAGGATCCTATTCTGAGAACCAGACATCATTATCAGACAAGTTCAAGGGAACTCATGATTTCATTCCATACTACTGA 1929 0.4023 MMLQHSNIFIEQDFLLLIQILVLVLLLFPQTTISDLHSEKQALLDFASAFHHGKKVNWNMNTSMCNSWNGVTCNPKGTNVISLRLPGVGLRGSLPPNTIGKLNGLTSLSLRSNTLSGKIPNDILALHSLRFLYLQHNNFSGEFPNFLPPRLVLLDLSHNSFTGQISNSIQNLTNLTGLFLKNNSLIGPIPNVTLPSLKDLDLSFNNLNGSIPLAFHRFQSSSFDGNLMLCGPPLTKQCSSSSPLSSPMLSPLIVSQNSSDVSKKRPILGVVVAAALGGFGLLFLLVLMLVLYFLKKRVGEQNEAPKASKLGENLREDFGSGVQEPEKNKLVFFGGCSYNFDLEDLLRASAEVLGKGSCGTTYKAVLEEGTVVVVKRLKEVAIGKREFEQQMETVQKLDQHPNVVPFSAYYYSKDEKLVVYDYLPFGSFSKLLHGTRETGRTPLDWDTRLKIMLGAAKGVAHIHSASGRKFVHGNIKSCNVLLLGDLQGCISDFGLAPLASFSGSFRSPGYRAPEVIETQKSTQKSDVYSFGVLLLEMLTGKTPIQYSGHDDPVDLPRWVQSVVREEWTAEVFDLELMRYPNIEEELVQMLQLSMACVAMVPDTRPSMEEVVRVIEEIIGSYSENQTSLSDKFKGTHDFIPYY 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g02847 642 SUPERFAMILY L domain-like 54 234 - -
Arst4g02847 642 PANTHER OS05G0588300 PROTEIN 18 620 - -
Arst4g02847 642 SUPERFAMILY Protein kinase-like (PK-like) 351 614 IPR011009 -
Arst4g02847 642 Pfam Leucine rich repeat N-terminal domain 38 74 IPR013210 -
Arst4g02847 642 FunFam pollen receptor-like kinase 1 316 422 - -
Arst4g02847 642 Pfam Leucine Rich Repeat 151 172 IPR001611 GO:0005515
Arst4g02847 642 Pfam Protein kinase domain 350 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g02847 642 FunFam Leucine-rich repeat receptor-like protein kinase 38 148 - -
Arst4g02847 642 PRINTS Leucine-rich repeat signature 194 207 - -
Arst4g02847 642 PRINTS Leucine-rich repeat signature 151 164 - -
Arst4g02847 642 Gene3D Transferase(Phosphotransferase) domain 1 424 638 - -
Arst4g02847 642 ProSiteProfiles Protein kinase domain profile. 347 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g02847 642 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 423 628 - -
Arst4g02847 642 Gene3D Ribonuclease Inhibitor 37 148 IPR032675 -
Arst4g02847 642 FunFam Leucine-rich repeat receptor-like protein kinase 149 238 - -
Arst4g02847 642 Pfam Leucine rich repeat 93 139 IPR001611 GO:0005515
Arst4g02847 642 Gene3D Phosphorylase Kinase; domain 1 316 422 - -
Arst4g02847 642 Gene3D Ribonuclease Inhibitor 149 240 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g02847 Arst-Chr4 102729430 102732716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g02847 23 630 Receptor kinase-like Gene Family AT5G58300 59.098 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Arst4g02847 Pkinase 2.2e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g02847 - - gmx:100810832 844.728