LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst4g02838	ATGAGGAGCATCAATTGCTATGTTCCATTGTTTGTTTGCTTGTTGTTGTTAGGATTCTTAGATACTAAGGTTGTCCTAGGACAAAATTATAAGCCTGCAGATAACATTCTATTGAGCTGTGGTGGTCCTCAAACTAGTAAAGATTCTGATGGAAGGGTATGGCATAGTGATGTTGGTTCCAAGTTTGCATCATCCAAGGGAAACACCAGCACCTCGCCAGCGGCGACTCAGGACCCTGCTGTCCCTACTGTGCCATACATGAATGCCAGGGTGTTCCATTCGCCTTATACATACTCCTTTCCGGTGGCGTCCGGTTGGAAGTTCCTCCGGCTGTACTTCTACTCGGCGTCCTACAATGGACTCAATGCCAGCGACGCGCTGTTCTCGGTGACTTCGCCGTCCTATACCTTGCTCAGGAACTTCAGTGTGGCGCAAACCACACTGGCTCTGAATTATGTCTACATTGTGAAGGAGTACTGCATCAATGTTGATGGGGATACCTTGAATGTGACTTTCACTCCATCGACCAACAAGTCGAACGCTTATGCGTTTGTTAATGGGATTGAGGTTGTGTCCATGCCTGATATTTATACTGAAACTGATGGTTCTACCATGATGGTGGGTACGAATTCTCCTATCACTGTTGACAACAGCACTGCACTTGAGACTCTCTATAGGTTGAATGTGGGTGGAAATGATATCTCGCCTTCCCAAGATACTGGTCTGTTTAGGTCTTGGTCTGATGATGTGCCCTACCTATTTGGGGCAGGGTTTGGTGTGACCGAGCCTGCTGATTCGTCGGTCAAGATTCAGTATCCTCCAGGCACACCAAGTTATATTGCTCCACTTGATGTCTACAGTACAGCCAGATCAATGGGGCCAACTCCGAACATCACCATTCAATACAACTTGACTTGGGTTTTCTCTATTGACTCTGGGTTTACGTATCTTGTGAGACTCCATTTTTGTGAGGGAACATCAGTTATAAACAAGGTCAATCAGAGAGTATTTGATATATTCCTCAATAATCAAACTGCTGATCCCGCGGCTGATGTTATTGCGATGGCACAAGCAGAATACGGAACTTCATATACAAATGGAGTTGCAATTCATAAAGATTACGCTGTGTTTGTTCCCAATGGAGAGCCACGCCAAGATCTGTGGCTTTCATTACATCCTGATAAAACTATGAAGCCCAACTATTATGATGCAATCTTGAATGGAGTGGAGATATTCAAAATTAGTGATGCTAATGGTAATCTGGCTGGGACAAATCCTATTCCTCCTCCACTGCAAGACAACATTGACCTCGCTTTGGTTAGGAGTCATCATGCTACATCGAAGAATCATACAGGAATAATTGCAGGAGGTGTTGCTGGAGGAATTGTTGTAGCACTTGTCATTGGATTATTTGCTTTCATTGTATCCCGTCGTCGCAGGCAAGGAAAGGAGCCTAGTTCAAGTGAAGGGCCATCCGGATGGCTTCCACTTTCTCTGTACGGCAATTCGCACTCTGCAGCTTCGGCCAAGACCAACACAACAGGAAGTTATGCGTCCTCTCTGCCATCGAACCTTTGTCGTCACTTCTCATTTGCTGAAATCAAGGCCGCCACGAACAACTTTGATGAGGCTTTGCTTCTTGGTGTGGGAGGATTTGGTAAGGTTTACAAAGGTGAAATCGATGGCGGGTCAACCAAAGTAGCAATCAAGCGTGGGAATCCATTGTCTGAGCAAGGAGTGCACGAGTTCCAAACCGAGATTGAAATGCTCTCTAAACTCCGCCACCGCCACCTTGTCTCATTGATTGGTTATTGTGAAGAAAACACTGAAATGATTCTTGTCTATGATTACATGGCCCATGGAACACTCAGGGAGCATCTATACAAGACACAGAAACCTCCATTGCCTTGGAAACAAAGGCTTGAGATATGCATTGGAGCTGCTCGGGGTTTACACTATCTTCACACTGGTGCCAAACACACTATCATCCACCGTGATGTGAAGACAACAAACATCTTACTTGATGAGAAGTGGGTGGCCAAGGTCTCTGATTTCGGCTTGTCAAAAACCGGCCCAACATTGGATAACACACACGTAAGCACTGTCGTAAAGGGTAGTTTCGGATACTTGGATCCAGAATACTTCAGGAGGCAGCAACTCACTGACAAATCCGATGTTTACTCATTTGGGGTGGTTCTCTTTGAGATACTCTGTGCTCGTCCGGCTCTAAATCCGACCCTTGCCAAGGAGCAAGTGAGTCTAGCCGAGTGGGCGGCTCACTGCTACAGAAAAGGCAATCTTGACCAAATTGTGGATCCTTACCTCAAGGGCAAGATAGCTTTTGAATGCTTCAAGAAGTTTGCCGAGACTGCGATGAAGTGTGTGGCCGACCAAGGTATCGAGCGGCCATCCATGGGCGATGTCTTGTGGAACCTCGAGTTTGCTTTGCAGCTGCAAGAAAGCGCCGAGGAGAGTGGCAAGGGATTCGCCGGAATACTCAACGAGGAGGAGCCGCTATGCGCAGATCCTAAAGGGAAGAAGGACTCTGATGCATTGCCAATGTATGATGGCAATACTGATTCAAGAAGCAGTGGCATGAGCATGAGCATTGGTGGTAGAAGCTTAGCAAGTGAAGACTCTGATGGATTAACACCAAGTGCTGTTTTCTCTCAGATCATGAATCCAAAGGGTCGTTAA	2697	0.4635	MRSINCYVPLFVCLLLLGFLDTKVVLGQNYKPADNILLSCGGPQTSKDSDGRVWHSDVGSKFASSKGNTSTSPAATQDPAVPTVPYMNARVFHSPYTYSFPVASGWKFLRLYFYSASYNGLNASDALFSVTSPSYTLLRNFSVAQTTLALNYVYIVKEYCINVDGDTLNVTFTPSTNKSNAYAFVNGIEVVSMPDIYTETDGSTMMVGTNSPITVDNSTALETLYRLNVGGNDISPSQDTGLFRSWSDDVPYLFGAGFGVTEPADSSVKIQYPPGTPSYIAPLDVYSTARSMGPTPNITIQYNLTWVFSIDSGFTYLVRLHFCEGTSVINKVNQRVFDIFLNNQTADPAADVIAMAQAEYGTSYTNGVAIHKDYAVFVPNGEPRQDLWLSLHPDKTMKPNYYDAILNGVEIFKISDANGNLAGTNPIPPPLQDNIDLALVRSHHATSKNHTGIIAGGVAGGIVVALVIGLFAFIVSRRRRQGKEPSSSEGPSGWLPLSLYGNSHSAASAKTNTTGSYASSLPSNLCRHFSFAEIKAATNNFDEALLLGVGGFGKVYKGEIDGGSTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENTEMILVYDYMAHGTLREHLYKTQKPPLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDNTHVSTVVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEILCARPALNPTLAKEQVSLAEWAAHCYRKGNLDQIVDPYLKGKIAFECFKKFAETAMKCVADQGIERPSMGDVLWNLEFALQLQESAEESGKGFAGILNEEEPLCADPKGKKDSDALPMYDGNTDSRSSGMSMSIGGRSLASEDSDGLTPSAVFSQIMNPKGR	898

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst4g02838	898	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	662	674	IPR008271	GO:0004672\|GO:0006468
	Arst4g02838	898	FunFam	Receptor-like protein kinase FERONIA	618	828	-	-
	Arst4g02838	898	Gene3D	Phosphorylase Kinase; domain 1	502	617	-	-
	Arst4g02838	898	FunFam	FERONIA receptor-like kinase	219	415	-	-
	Arst4g02838	898	Gene3D	Transferase(Phosphotransferase) domain 1	618	831	-	-
	Arst4g02838	898	Pfam	Malectin-like domain	38	414	IPR024788	-
	Arst4g02838	898	FunFam	FERONIA receptor-like kinase	35	194	-	-
	Arst4g02838	898	FunFam	Receptor-like protein kinase FERONIA	513	617	-	-
	Arst4g02838	898	ProSitePatterns	Protein kinases ATP-binding region signature.	547	570	IPR017441	GO:0005524
	Arst4g02838	898	Pfam	Protein tyrosine and serine/threonine kinase	547	808	IPR001245	GO:0004672\|GO:0006468
	Arst4g02838	898	SUPERFAMILY	Protein kinase-like (PK-like)	515	815	IPR011009	-
	Arst4g02838	898	CDD	STKc_IRAK	547	813	-	-
	Arst4g02838	898	MobiDBLite	consensus disorder prediction	856	891	-	-
	Arst4g02838	898	Gene3D	-	219	415	-	-
	Arst4g02838	898	Gene3D	-	36	194	-	-
	Arst4g02838	898	PANTHER	OS03G0124300 PROTEIN-RELATED	12	485	IPR046957	GO:0004672
	Arst4g02838	898	SMART	serkin_6	541	815	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst4g02838	898	MobiDBLite	consensus disorder prediction	840	898	-	-
	Arst4g02838	898	ProSiteProfiles	Protein kinase domain profile.	541	815	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst4g02838	Arst-Chr4	102588556	102591588	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst4g02838	24	898	Receptor kinase-like Gene Family	AT3G51550	72.955	0.0	1295

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Arst4g02838		Malectin_like	1.8e-39	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst4g02838	-		-	gmx:100499644	1462.59