Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g02835 ATGGGATTTAGAAACTTGGGGCTACTTGGATCATTTGCCAAAGAGGGGTTGGAAAAAGCATTCTCTCTTGGAAAGTTCTTCTGTTTTCTACATGTCACCGACACCTATTTGGTCACCTTTGTTGTGACATCTGGTCCCAGCATGCTTCCCACAATAGATTTGATCCCAACAATGTTTTTGGGTGAAAGGATCTCAACTAGATTTGGTAAAGTTACTCGTGGAGATATTGTGATTATTCGCTCCCCTCAAAACCCTAGGAAGCTTATTGCTAAACGATTGGCTGGAATGGAGGATGATACTGTTACATACATTTCTAACCCTGATGAGCCTGATAAGCAGGAAACTATTGTGGTTCCAAAGGGTCACGTTTGGATACAGGGTGATAATGCATATAAATCCAATGATTCAAGGAATTTTGGTGCTGTTCCTTATGGACTTATTCAGCACAGGCTATTTTGGAGGGTATGGCCAATCAAAGGTTTTGGACCTTTCTGGAAACACTGA 504 0.4147 MGFRNLGLLGSFAKEGLEKAFSLGKFFCFLHVTDTYLVTFVVTSGPSMLPTIDLIPTMFLGERISTRFGKVTRGDIVIIRSPQNPRKLIAKRLAGMEDDTVTYISNPDEPDKQETIVVPKGHVWIQGDNAYKSNDSRNFGAVPYGLIQHRLFWRVWPIKGFGPFWKH 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g02835 167 CDD S26_SPase_I 40 148 IPR019533 GO:0004252|GO:0006465
Arst4g02835 167 PRINTS Bacterial leader peptidase 1 (S26A) family signature 36 52 IPR000223 GO:0006508|GO:0008236|GO:0016020
Arst4g02835 167 PRINTS Bacterial leader peptidase 1 (S26A) family signature 118 137 IPR000223 GO:0006508|GO:0008236|GO:0016020
Arst4g02835 167 PRINTS Bacterial leader peptidase 1 (S26A) family signature 89 101 IPR000223 GO:0006508|GO:0008236|GO:0016020
Arst4g02835 167 Pfam Signal peptidase, peptidase S26 28 103 IPR019533 GO:0004252|GO:0006465
Arst4g02835 167 Pfam Signal peptidase, peptidase S26 113 156 IPR019533 GO:0004252|GO:0006465
Arst4g02835 167 Gene3D Umud Fragment, subunit A 33 165 - -
Arst4g02835 167 FunFam Inner membrane protease subunit 1 34 163 - -
Arst4g02835 167 SUPERFAMILY LexA/Signal peptidase 35 165 IPR036286 -
Arst4g02835 167 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 11 164 - -
Arst4g02835 167 ProSitePatterns Signal peptidases I signature 3. 123 136 IPR019758 GO:0004252|GO:0016020
Arst4g02835 167 NCBIfam signal peptidase I 26 158 IPR000223 GO:0006508|GO:0008236|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g02835 Arst-Chr4 102556063 102560132 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g02835 48 164 MADS-box Gene Family AT1G29960 53.846 5.08e-43 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g02835 K09647 - csin:114265272 221.861