Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g02792 ATGAAAATGAAGGTGCAATCATATTGCATATTCCTACTACTGTTTCTGATTCTTTTTACTTCACCAAAACCAGTGCTATCTGATGACACTTCATTCAATGATGATGTTTTGGGTTTGATTGTGTTCAAAGCCGGTTTGGATGATCCAAAGGGTAAACTTTCTTCATGGAATGAAGATGATTTAACCCCTTGCAATTGGGATGGTGTGGATTGTGACCTCTCAACAAAAAGGGTCAATTCCCTTGTTCTTGATGGTTTCTCTCTTTCTGGCCATGTTGATAGAGGACTCTTGAGGCTTCAAAATCTAAAGATTCTCTCACTTGCAAGGAACAACTTCACTGGCACCATAAACCCTGATCTTCCTTCATCACTTGGTGGATTGCAAGTTGTTGACTTTAGTGACAACAATCTCTCTGGTTCAATCCCTGAAGGGTTCTTCAACCAATGTGGCTCTCTTAGAACAGTTTCCTTTGCCAAGAACAACCTCACAGGTAAGGTTCCTGATTCCTTGAGCTCATGCTCCACATTGGTGAATGTTAACTTTTCATACAATCAAATTTCTGGTATATTGCCATCTGGGGTGTGGTTCTTGAGGGCAATACAGTCATTTGATCTGTCAAATAACTTGCTTGAAGGAGAGATTCCTGAGGGAATTAAGAATCTGTATGATTTGAGGGAGTTAAATTTGCAGAATAATCACTTTAGTGGAAAGATTCCTGAAGAAATTGGAGGGTGCTTGGTTTTGAAATCAGTGGATTTGAGTGGTAATTTTCTCTCTGGGGAACTTCCTGAGTCAATGCAAAGACTCACTTCATGCACATCACTCAGTTTGCAGAGAAATTCCCTCACCGGAACCATTCCTGATTGGATTGGAGGGTTGAAAAGTCTAGAGATTTTGGATCTTTCAGCTAATGAACTTTCCGGTTGGATTCCGAAATCATTAGGGAATTTAGACTCACTGCTTAGGTTGAATTTGTCCAGGAATCAGTTCACAAGAAACTTGCCGTTTTCGATGGCGAATTGTTCTAAGCTTTCGACATTCGACATAAGCCAGAATGAATTTTCAGGCCATATTCCTTGGTGGATATTCATAATGGGTTTTCAAGGTTCACCTTTCCATGATCTTGAAGTGTTGGATTTGTCATCCAATGCATTTTCTGGTGAGCTTCCATATGGCATTGGGAACCTTAGCAGTTTGCAAGTGTTGAATGTTTCCGGCAACAATATCTCTGGCTCGATTCCTGTGACCATAGGAGAACTCAAATCTTTATACATTCTTGATTTGAGTGACAACAAGATTAATGGAAGCATTCCTTCTGAAATTCAAGGTGCACGTTCACTCAGTGAATTGATGCTACAAAGGAACTTCCTAAGTGGGAGAATTCCAGCCGAAATCGACAAGTGTTCATCTTTAACATCTTTGATACTTTCTCACAACAAGCTTACTGGTTCAATCCCAGCATCAATTGCAAACCTCACAAATCTTCAATATGTTGATTTGTCATGGAATGAAGTCTCTGGAGGTTTACCGAAGGAGCTTACAAATCTTTCACACCTTCTTGGTTTTAATGTATCCTACAACCAGCTTCAGGGTGAGCTACCAGTGGGTGGATTCTTCAACACCATCTCACCCTCATCTGTCTCCGGCAACTCATTGTTATGTGGTTCTGTTGTCAATCAATCCTGTCCATCCGACCACCCGAAACCTATTGTCTTAAACCCGAATTCTTCAAGTTCCAACTCCAGCATTTCGGCACAGAATCGCCATCATAAGATCATACTCAGTATCTCAGCTCTTATTGCTATAGGAGCAGCTGCTTTTATAGCCGTTGGTGTGGTGGCTATTACAGTCTTAAACATTCATGTGCGCAATTCAATGGCTCGTTCGGCTGCTCAGTTTGCATTCTCTGGTGGTGAGGACTATAGTGGTTCGCCCGAAAATGATCCAAACTATGGCAAGCTTGTCATGTTTTCTGGTGATGCAGACTTTGCAGATGGAGCTCATAATCTTCTTAATAAAGACAGTGAAATTGGCCGTGGAGGATTCGGAGTTGTTTATCGCACTGTCCTTCGAGACGGCCACTCTGTTGCAATCAAGAAGCTTACAGTGTCCAGTTTGATCAAGTCCCAAGATGACTTTGAAAGGGAAGTGAAAAATCTCGGCAAGGTTAGACACCAAAACCTGGTGACACTCGAAGGCTATTACTGGACTTCATCTTTGCAGCTTCTCATTTATGAGTACTTATCCAAAGGGAGTTTGCATAAACTCCTCCATGATGATAATAACAGCAAAGATGTCTTTTCTTGGAGACAAAGGTTCCGGATTATTCTCGGCATGGCGAAAGGGTTAGCTCATTTGCACCAGATGGACATAATCCATTACAATCTTAAGTCAACCAATGTACTGATTGATTGTTCCAGCGAGGCGAAAATAGGAGACTATGGCCTAGTAAAGCTTTTGCCAATGCTAGACCATTGTGTTTTGAGCAGCAAAATTCAAAGCGCGCTCGGCTACATGGCTCCGGAGTTTGCTTGCCGAACAGTTAAGATAACCGAGAAATGTGATGTGTATGGCTTTGGAATCCTTGTTCTTGAGGTGGTGACTGGAAGAAGGCCTGTGGAATACATGGAGGATGATGTGGTTGTTCTTTGTGACATGGTGAGAGGTGCATTGGAGGAAGGCAAGGTTGAGCAATGTGTTGATGGGAGGCTACTTGGTAATTTCGCAGCCGAAGAAGCGATTCCTGTGATCAAATTGGGGTTGATTTGTGCCTCACAAGTGCCGTCGAACCGGCCGGATATGGCCGAGGTAATCAACATACTAGAGTTAATCCAATGCCCTTCAGAAGGACAAGAGGAGTTAGAATGA 2868 0.4229 MKMKVQSYCIFLLLFLILFTSPKPVLSDDTSFNDDVLGLIVFKAGLDDPKGKLSSWNEDDLTPCNWDGVDCDLSTKRVNSLVLDGFSLSGHVDRGLLRLQNLKILSLARNNFTGTINPDLPSSLGGLQVVDFSDNNLSGSIPEGFFNQCGSLRTVSFAKNNLTGKVPDSLSSCSTLVNVNFSYNQISGILPSGVWFLRAIQSFDLSNNLLEGEIPEGIKNLYDLRELNLQNNHFSGKIPEEIGGCLVLKSVDLSGNFLSGELPESMQRLTSCTSLSLQRNSLTGTIPDWIGGLKSLEILDLSANELSGWIPKSLGNLDSLLRLNLSRNQFTRNLPFSMANCSKLSTFDISQNEFSGHIPWWIFIMGFQGSPFHDLEVLDLSSNAFSGELPYGIGNLSSLQVLNVSGNNISGSIPVTIGELKSLYILDLSDNKINGSIPSEIQGARSLSELMLQRNFLSGRIPAEIDKCSSLTSLILSHNKLTGSIPASIANLTNLQYVDLSWNEVSGGLPKELTNLSHLLGFNVSYNQLQGELPVGGFFNTISPSSVSGNSLLCGSVVNQSCPSDHPKPIVLNPNSSSSNSSISAQNRHHKIILSISALIAIGAAAFIAVGVVAITVLNIHVRNSMARSAAQFAFSGGEDYSGSPENDPNYGKLVMFSGDADFADGAHNLLNKDSEIGRGGFGVVYRTVLRDGHSVAIKKLTVSSLIKSQDDFEREVKNLGKVRHQNLVTLEGYYWTSSLQLLIYEYLSKGSLHKLLHDDNNSKDVFSWRQRFRIILGMAKGLAHLHQMDIIHYNLKSTNVLIDCSSEAKIGDYGLVKLLPMLDHCVLSSKIQSALGYMAPEFACRTVKITEKCDVYGFGILVLEVVTGRRPVEYMEDDVVVLCDMVRGALEEGKVEQCVDGRLLGNFAAEEAIPVIKLGLICASQVPSNRPDMAEVINILELIQCPSEGQEELE 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g02792 955 Pfam Leucine rich repeat 445 504 IPR001611 GO:0005515
Arst4g02792 955 Pfam Leucine rich repeat 273 330 IPR001611 GO:0005515
Arst4g02792 955 FunFam Leucine-rich repeat receptor-like protein kinase PXC2 366 565 - -
Arst4g02792 955 FunFam Inactive leucine-rich repeat receptor-like protein kinase 192 288 - -
Arst4g02792 955 SMART LRR_typ_2 99 123 IPR003591 -
Arst4g02792 955 SMART LRR_typ_2 396 420 IPR003591 -
Arst4g02792 955 SMART LRR_typ_2 317 341 IPR003591 -
Arst4g02792 955 SMART LRR_typ_2 197 220 IPR003591 -
Arst4g02792 955 SMART LRR_typ_2 293 316 IPR003591 -
Arst4g02792 955 SMART LRR_typ_2 221 245 IPR003591 -
Arst4g02792 955 SMART LRR_typ_2 124 148 IPR003591 -
Arst4g02792 955 SMART LRR_typ_2 492 515 IPR003591 -
Arst4g02792 955 SMART LRR_typ_2 516 540 IPR003591 -
Arst4g02792 955 SUPERFAMILY L domain-like 50 362 - -
Arst4g02792 955 FunFam LRR receptor-like serine/threonine-protein kinase 291 365 - -
Arst4g02792 955 ProSiteProfiles Protein kinase domain profile. 671 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g02792 955 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Arst4g02792 955 Pfam Leucine Rich repeat 397 411 IPR001611 GO:0005515
Arst4g02792 955 SUPERFAMILY RNI-like 274 534 - -
Arst4g02792 955 SMART LRR_sd22_2 492 518 - -
Arst4g02792 955 SMART LRR_sd22_2 293 319 - -
Arst4g02792 955 SMART LRR_sd22_2 420 443 - -
Arst4g02792 955 ProSitePatterns Protein kinases ATP-binding region signature. 677 700 IPR017441 GO:0005524
Arst4g02792 955 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 665 747 - -
Arst4g02792 955 Pfam Protein kinase domain 672 879 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g02792 955 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 748 950 - -
Arst4g02792 955 Gene3D Transferase(Phosphotransferase) domain 1 748 948 - -
Arst4g02792 955 Gene3D Ribonuclease Inhibitor 33 196 IPR032675 -
Arst4g02792 955 SUPERFAMILY Protein kinase-like (PK-like) 672 945 IPR011009 -
Arst4g02792 955 Pfam Leucine Rich Repeat 224 245 IPR001611 GO:0005515
Arst4g02792 955 FunFam Leucine-rich repeat receptor-like protein kinase 32 191 - -
Arst4g02792 955 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 314 421 IPR046959 -
Arst4g02792 955 Gene3D Ribonuclease Inhibitor 272 565 IPR032675 -
Arst4g02792 955 Gene3D Ribonuclease Inhibitor 197 270 IPR032675 -
Arst4g02792 955 Gene3D Phosphorylase Kinase; domain 1 660 747 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g02792 Arst-Chr4 101493945 101497600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g02792 11 952 Receptor kinase-like Gene Family AT5G01890 60.288 0.0 1108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Arst4g02792 Pkinase 3.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g02792 - - gmx:100813535 1500.72