Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g02741 ATGCAAGTCATGTTCTCAAAGAGAAGATCTGGTTTGCTGAAGAAGGCAAACGAAATTTCAGTGCTATGCGATGCCGAAGTTGCACTCATCGTCTTCTCTACCAAAGGTAAGCTCTTTGAATATTCCAGCGATCCATGGATTGCCTTCAGCTTTCCTCTGATATTACATGTTAAATATGTGGGAACTGTTACCATGTTGGGAACCTCTGGTTCTCACCCATGCGGATTTTGTGATTTTCATATGCAGAACGTGAAGCTCCTCGCTAAGGGTGTTACAGCAGTAAGGACAGTTATAGTAGCAGCAGGGAAGATGGCCTTCTCTTCCACCTTGATTCGTGATTTCGGCGGCGGCAGCGGCAAGGAAATTTACAATAATCACTTTATCCAATACAAACAGTTTCAGTGA 405 0.437 MQVMFSKRRSGLLKKANEISVLCDAEVALIVFSTKGKLFEYSSDPWIAFSFPLILHVKYVGTVTMLGTSGSHPCGFCDFHMQNVKLLAKGVTAVRTVIVAAGKMAFSSTLIRDFGGGSGKEIYNNHFIQYKQFQ 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g02741 134 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 2 41 IPR002100 GO:0003677|GO:0046983
Arst4g02741 134 Gene3D - 1 49 IPR036879 GO:0003677|GO:0046983
Arst4g02741 134 ProSiteProfiles MADS-box domain profile. 1 45 IPR002100 GO:0003677|GO:0046983
Arst4g02741 134 SUPERFAMILY SRF-like 2 46 IPR036879 GO:0003677|GO:0046983
Arst4g02741 134 PANTHER SERUM RESPONSE FACTOR HOMOLOG 4 44 - -
Arst4g02741 134 PRINTS MADS domain signature 7 22 IPR002100 GO:0003677|GO:0046983
Arst4g02741 134 PRINTS MADS domain signature 22 43 IPR002100 GO:0003677|GO:0046983
Arst4g02741 134 SMART madsneu2 2 44 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g02741 Arst-Chr4 100060579 100067561 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g02741 2 89 MADS-box Gene Family AT1G26310 52.273 2.51e-19 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Arst4g02741 SRF-TF 1.1e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g02741 K09264 - adu:127746673 271.552