Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g02732 ATGGCTTCTAGTAGGGAGAGAAGAAGGGAGGCTCTTCAACAAAAGTTGAATCAACTCCGAGATGTTACAAATTCTAGTGGTGTGAACAAAGCTTCAATTATTGTGGACGCATCCAGATACATAGAGGAGTTGAAGCAAAAAGTGGAGGGACTGAATTCCGAGCTTGTAATCACTGAAACATCTTCGTCAACCTCTCAAATTGATGATGAACTACCTATGGTGACTGTGGAAACCCTAGAAAAAGGTTTCCACATTAACGTGTATTCAGAGAAGAATTGCCCTGGTATGTTGGTCTCAATACTAAAAGCATTTGAAGAGCTTGGACTTGATGTTCTTGATGCTAGGGTTTCTTGTGAAGACACTTTCCAGCTTCAAGCAGTGGGTGGAGAAAGTCAAAAGAACAATGATACTATTGACGCACAAGTGGTGAAGCAAGCAGTGTTGCAAGCAATCAACAAAAGTAATTACTAA 471 0.4055 MASSRERRREALQQKLNQLRDVTNSSGVNKASIIVDASRYIEELKQKVEGLNSELVITETSSSTSQIDDELPMVTVETLEKGFHINVYSEKNCPGMLVSILKAFEELGLDVLDARVSCEDTFQLQAVGGESQKNNDTIDAQVVKQAVLQAINKSNY 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g02732 156 Coils Coil 34 61 - -
Arst4g02732 156 Gene3D - 3 67 IPR036638 GO:0046983
Arst4g02732 156 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 7 55 IPR036638 GO:0046983
Arst4g02732 156 Coils Coil 2 22 - -
Arst4g02732 156 CDD ACT_UUR-ACR-like 94 151 - -
Arst4g02732 156 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 5 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g02732 Arst-Chr4 99743573 99746936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g02732 4 130 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 29.936 1.76e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g02732 - - gmx:100527466 217.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g02732 4 99743573 99746936 Arst4g02732 4 99743573 99746936 ECH
Arst4g02732 4 99743573 99746936 Arst10g01248 10 16584878 16587195 ECH
Arst4g02732 4 99743573 99746936 Arst7g01048 7 8533290 8535077 ECH
Arst1g00704 1 6984498 6987639 Arst4g02732 4 99743573 99746936 ECH
Arst4g02732 4 99743573 99746936 Arst1g00704 1 6984498 6987639 ECH