Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g02725 ATGAGAATTGAGAGAAAGAAGAAGAGTAGTAATGGATCTGTGTGGTCTATTTTCATGCATGCGGATACCCAAGACTGGCTTCTAATGGGTTTTGGTGTGTTAGGGTCCATTGGTGAAGGTTCCACCACTCCTCTTGTGCTCTATCTCAGTAGCCTCATTATGAACAATATTGGGACTTCTTCTACCATCTCATCAACCACTTTTGTCCATTGCATCAACAAGAATGCAGTGGCTTGGTTATATTTGGCTGCTGGAACATTCCTTGTTTGCTTCCTCGAGGGTTATTGTTGGACAAGAACAAGTGAGAGACAAGCAGCAAGAATGAGAGCAAAGTACCTGAAAGCAGTGATGAGACAAGAAGTTGCATATTTTGATTTGAATGTGACAAGTACCTCAGACATTATCACTGGCGTTTCCAATGATAGCCTCCTCATTCAGGATGTTATTAGTGAGAAGGTACCAAATTTGTTGATGAACTTTTCATTGTTCATTGGGAGCTACATAGCTGGTTTTGCAATGCTATGGAGATTGGCCATAGTAGGGATCCCATTCACAGTTCTTCTTGTAATCCCTGGCTTCATTTATGGCAAGACATTAATGGGATTAGCAAAGAAAATGAGAGAAGATTATAATAAAGCAGGTGTAATAGCTGAACAAGCAATATGTTCAATAAGAACAGTGTATTCATATGTGGGAGAAAATAAGACCATAAATGCATTCTCTAATGCTCTTCAAGGGTCACTGAGTTTGGGAATCAAACAAGGGTTGGCTAAAGGTTTAGCCATTGGAAGCAATAATGGTATTGTTTTTGGTATATGGTCTTTTTTGTGTTATTATGGTAGCAGATTGGTCATGGACCATGGTGCTAAAGGAGGCACAGTTTTTTCAGCTGGAGCAGCTATCACTGTTGGTGGATTGGCACTAGGTGCTGGTTTAACCAACATGAAATACCTGAGCGAAGCAAGTTCAGCAGCGGAACGCATAAGGGAAGTCAATGGGAGAGTTCCGATGATCGATTCCGACGACAGTGACGGCGAAATCCTGGGAAGCGTTCGAGGGGAAGTAGAATTCCGAAACGTAGATTTCGCGTACCCGTCGAGACCAGAGACCGTTATTTTGAAGGGTTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCATCATTGCGCTTTTGCAGCGGTTTTACGACCCTCTTGGTGGCGAAATAAGGTTTGATGGTGTTGCCATTGATAAGTTGCAGCTCAAGTGGTTCAGATCACAGATGGGGTTAGTGAGTCAAGAGCCCGCATTATTTGCCACCAGCATCAAAGAGAACATCCTGTTTGGGAAGGAAGATGCAACAGAGGCTGAGGTCATTGAGGCTGCAAAAGCTTCCAATGCTCATAATTTTATTTCCATGCTGCCTCAGGGTTATCAAACCCAGGTGGGTGAGAGAGGAACTCAAATGTCAGGTGGACAAAAGCAGAGGATTGCAATTGCTAGGGCCATAATTAAGAAGCCAAGAATGCTTCTTCTGGACGAAGCAACCAGTGCACTAGACTCCCACTCAGAGCGAATTGTCCAAAAAGCCCTCGAACAAGTATCTGTTGGCTGCACCACCATCGTCGTCGCCCACCGCCTGTCCACGATTCGCAATGCCGACGTCATCGTTGCCATGCGAGCCGGAAAGGTGGTGGAGATGGGCACTCACGACGACCTCCTCTTGAATCATGATGGACTCTATTCCTCCATGGTTCGTCTCCAACAAACTGAGAAATCAGAAACAGATGAATCTGTAACTGCCCCAACAACTACTATTCATGTTCCTTCTTCTATGTCGGCTAGTGACACCGCTGATATTCACCACCTATGTTTAATTCATACAGATGATGATGACAACATTGAAAAGGTGGAAGAAGAGAAAGAGGAGAATAAGAACGCTCAGGCGACGGCATCGTTCTGGAGGCTGCTGGCACTGAACCTTCCGGAGTGGAAGCAAGCAGTTATGGGTTGCTTGAATGCGATGGTGTTCGGTGCAGTTCAACCGGTGTACACTTTGATTATGGGGTCGATGATGTTTGTGTATTTCGACAGCGATGATGAAGAGATAAAGAGGAAGACGAAGGAGTACTCGGTTTGCTTTGTGGGACTGTTTGTGTTGTCTTTGATTGTGAACATCGGGCAGCATTATAGCTTTGCATATATGGGAGAGTGCTTGACCAAAAGAATTAGAGAGACTATGTTTAAAAAGATACTCACCTTTGAAGTTTCCTGGTTTGATCTTTCTGAAAATTCTACCGGTGCTATTTGCTCTAGGCTTGCCAACGATGCAAATGTGGTGAGGTCTTTAGTGGGAGATAGGATTGGTTTAGTGGTGCAGACAGCGTCAGCGGTAGTAACAGCTTGGACTTTGGGTTTGGTCATTGCATGGAGACTGGCTATTGTTATGATATGTGTTCAACCCCTTATGATTGCATGCTTCTATACAAAACGTGTCCTTATCAAGACTATGTCAAAAAAGGTTGCAAAGGCGCAAGAAGAAAGTAGCAAGGTTGCCGCTGAAGCCGTTTCAAACCTAAGAACTATCACAGCCTTCTCTTCTCAAAACCGAATCCTCAAAATGCTCGAAAATGCACAAGAAGGACCAAGACGCGAGAATATCCGGCAATCATTTTACGCCGGAATCGGCCTTGCATGTTCCCAAGGCATAACATCATGTGTTTGGGCTCTAAACTATTGGTACGGTGGCAAGCTCGTCGCCGACGGTTACATCACCACAAAGGCATTGTTTCAAAGCTTCATGATTATTGTGAGTACAGCAAGAGTCATTGCCGACGCCGGAAGCATGACCTCGGACCTCGCAAAAGGCGCTGACGCCGTGTGCTCCATTTTCGCCGTCTTAGACCGGACCACGAAGATAGCGGCCGACGACGAAAATGGTCACAACCCGGAACATGTAACAGGACAAATACAACTCCATGATGTGCATTTTGCTTACCCCACTAGGCCAAACGTGACTATCTTCAAATCCTTTTCAATGAAAATAGAAGCTGGAAAGTCAACGGCATTGATAGGTCAAAGTGGATCCGGAAAGTCAACGATTATAGGGCTAATTGCAAGGTTCTATGATCCGCTAAGAGGGTACGTGACAATTGATAATAGAGATGTAAAGTCCTATAATTTGAAACAATTAAGGAGGCACATTGCACTTGTGAGCCAAGAACCTACGTTGTTCAATGGGAGCATAAGAGAGAACATTGCTTATGGATCTAATAACGGTGATGATGATAATGAAGTTGATGAGTCAGAGATCATAGAGGCGTCAAAATTAGCCATGGCACATGATTTTATTACCGGATTGAAGGACGGTTATGACACGTGGTGTGGCGAGAAGGGGTTACAGCTTTCAGGGGGTCAAAAGCAAAGGATAGCGATTGCAAGGGCTATATTGAAAAATCCAAGAGTGTTGTTATTGGATGAGGCAACTAGTGCCCTTGATATTCAATCGGAGAAAGTTGTTCAGGAAGCACTAGAGAGGGCTATGGTGGAGAGGACTAGCGTGATCATCGCACATAGGATGTGTACCATAAAGAAATGTGATCTTATTGCTGTGTTGGAGAAGGGCATGGTTGTGGAAAGTGGGACCCACTCTTCTTTGTTGGCAAAAGGAACTGCTGGAGCTTATTGCAACTTTGTTAGGCTTCAGACTGGAACTAATTAG 3735 0.4369 MRIERKKKSSNGSVWSIFMHADTQDWLLMGFGVLGSIGEGSTTPLVLYLSSLIMNNIGTSSTISSTTFVHCINKNAVAWLYLAAGTFLVCFLEGYCWTRTSERQAARMRAKYLKAVMRQEVAYFDLNVTSTSDIITGVSNDSLLIQDVISEKVPNLLMNFSLFIGSYIAGFAMLWRLAIVGIPFTVLLVIPGFIYGKTLMGLAKKMREDYNKAGVIAEQAICSIRTVYSYVGENKTINAFSNALQGSLSLGIKQGLAKGLAIGSNNGIVFGIWSFLCYYGSRLVMDHGAKGGTVFSAGAAITVGGLALGAGLTNMKYLSEASSAAERIREVNGRVPMIDSDDSDGEILGSVRGEVEFRNVDFAYPSRPETVILKGLXXXXXXXXXXXXXXXXXXXXXTIIALLQRFYDPLGGEIRFDGVAIDKLQLKWFRSQMGLVSQEPALFATSIKENILFGKEDATEAEVIEAAKASNAHNFISMLPQGYQTQVGERGTQMSGGQKQRIAIARAIIKKPRMLLLDEATSALDSHSERIVQKALEQVSVGCTTIVVAHRLSTIRNADVIVAMRAGKVVEMGTHDDLLLNHDGLYSSMVRLQQTEKSETDESVTAPTTTIHVPSSMSASDTADIHHLCLIHTDDDDNIEKVEEEKEENKNAQATASFWRLLALNLPEWKQAVMGCLNAMVFGAVQPVYTLIMGSMMFVYFDSDDEEIKRKTKEYSVCFVGLFVLSLIVNIGQHYSFAYMGECLTKRIRETMFKKILTFEVSWFDLSENSTGAICSRLANDANVVRSLVGDRIGLVVQTASAVVTAWTLGLVIAWRLAIVMICVQPLMIACFYTKRVLIKTMSKKVAKAQEESSKVAAEAVSNLRTITAFSSQNRILKMLENAQEGPRRENIRQSFYAGIGLACSQGITSCVWALNYWYGGKLVADGYITTKALFQSFMIIVSTARVIADAGSMTSDLAKGADAVCSIFAVLDRTTKIAADDENGHNPEHVTGQIQLHDVHFAYPTRPNVTIFKSFSMKIEAGKSTALIGQSGSGKSTIIGLIARFYDPLRGYVTIDNRDVKSYNLKQLRRHIALVSQEPTLFNGSIRENIAYGSNNGDDDNEVDESEIIEASKLAMAHDFITGLKDGYDTWCGEKGLQLSGGQKQRIAIARAILKNPRVLLLDEATSALDIQSEKVVQEALERAMVERTSVIIAHRMCTIKKCDLIAVLEKGMVVESGTHSSLLAKGTAGAYCNFVRLQTGTN 1244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g02725 1244 ProSitePatterns ABC transporters family signature. 1140 1154 IPR017871 GO:0005524|GO:0016887
Arst4g02725 1244 Pfam ABC transporter 1014 1168 IPR003439 GO:0005524
Arst4g02725 1244 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 984 1240 IPR027417 -
Arst4g02725 1244 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 347 593 IPR027417 -
Arst4g02725 1244 Pfam ABC transporter transmembrane region 675 944 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst4g02725 1244 Pfam ABC transporter transmembrane region 30 301 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst4g02725 1244 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 995 1237 IPR003439 GO:0005524
Arst4g02725 1244 CDD ABC_6TM_Pgp_ABCB1_D1_like 29 328 - -
Arst4g02725 1244 ProSitePatterns ABC transporters family signature. 494 508 IPR017871 GO:0005524|GO:0016887
Arst4g02725 1244 PANTHER ABC TRANSPORTER B FAMILY 4 685 IPR039421 -
Arst4g02725 1244 PANTHER ABC TRANSPORTER B FAMILY 4 685 IPR039421 -
Arst4g02725 1244 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 355 591 IPR003439 GO:0005524
Arst4g02725 1244 FunFam ABC transporter B family member 4 985 1244 - -
Arst4g02725 1244 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 679 960 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst4g02725 1244 SUPERFAMILY ABC transporter transmembrane region 660 974 IPR036640 GO:0005524|GO:0016020
Arst4g02725 1244 CDD ABC_MTABC3_MDL1_MDL2 995 1240 - -
Arst4g02725 1244 Pfam ABC transporter 398 522 IPR003439 GO:0005524
Arst4g02725 1244 SUPERFAMILY ABC transporter transmembrane region 23 339 IPR036640 GO:0005524|GO:0016020
Arst4g02725 1244 Gene3D ABC transporter type 1, transmembrane domain 16 964 IPR036640 GO:0005524|GO:0016020
Arst4g02725 1244 FunFam Putative ABC transporter B family member 8 634 983 - -
Arst4g02725 1244 Gene3D - 985 1243 IPR027417 -
Arst4g02725 1244 FunFam ABC transporter B family member 1 345 594 - -
Arst4g02725 1244 Coils Coil 373 376 - -
Arst4g02725 1244 CDD ABC_MTABC3_MDL1_MDL2 355 593 - -
Arst4g02725 1244 CDD ABC_6TM_Pgp_ABCB1_D2_like 662 978 - -
Arst4g02725 1244 Gene3D - 345 594 IPR027417 -
Arst4g02725 1244 SMART AAA_5 393 576 IPR003593 GO:0016887
Arst4g02725 1244 SMART AAA_5 1022 1220 IPR003593 GO:0016887
Arst4g02725 1244 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 31 320 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Arst4g02725 1244 FunFam ABC transporter B family member 1 16 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g02725 Arst-Chr4 99299137 99310543 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g02725 4 1244 Calmodulin-binding Proteins AT2G36910 39.842 0.0 938
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g02725 K05658 - gmx:100807709 1644.02