Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g02608 ATGAGGAAACTAAGATTTAATCTGAAAGGACTGGGGCCGCTTCCTCCGACTGGTGGGAGTGGCGGAATAAGGAGAAACGACAATGCATCAAAATCTTTTGGGGTAGGAATGAGAAGGGGGTCGAATGGGCTAAGAGTACTTGGGAGATCCCTGAAAAGTGGAGTGACGTGGGCATCAGTGTTCCCAGAAGATCTTAAAGTGTCTGAGAGAAAAATATTTGACCCTCAAGACAAGACCCTTCTGCAGTGGAATAAATTCTTTCAAGTTTTGTGTATCATATCTGTATCTTTTGATCCCCTTTTCTTTTATCTCCCATATTTCAATCACAAATCATTCTGTCTTGCCATAGACAGTAGCCTGGCAAGCTATGCAGTTACACTCAGAACAATCTTCGATGCTATCTACATCCTTCGCATAAGTTTTCAGTTTCGCACTGCTTTCATTGCGCCTTCTTCTCGTGTCTTTGGACGAGGTGAACTCGTCATAGATCCTGCAGAGATTGCTAAGAGATATTTGCAACGTTACTTCATTGTTGACTTCCTCTCTGTGTTGCCTTTGCCACAGATTGTCGTGTGGAGATATCTTCATGATCCAGCGCGCACAAAGGTATTAGCCACAAAAACGCAACTGTTGAACATTGTCATTCTCCAATATTTTCCAAGATTTCTACGCTTTCTACCTTTGGCCTCAGAGATTAGCAAGACAGCAGGTGTTTTTTCGGAGAATACTTTGGTCGGCGCTGCATATTACTTGACTTGGTACATGCTTGGTAGCCACATAACTGGGTCTGTATGGTACTTATTAGCTGTAGAACGTAATGACACGTGCTGGAGGAATGCTTGCATGGAGGAAGAGCGATGTTTCACGCATTTCTTGTACTGTGGGGGTTCAAATAAGCGTGCTACTGGCTATGAAGAATGGAGAAAGATTAGCCCAAAGATTCTTAAGGATAAGTGTTCCGCTGATGATGACGACGCCCCATTTGACTATGGAATTTTCAATCAAGCCATAACATCTAATATTGTTGCATCAATCAATTTCTTTCCTAAACTATGTTACTGTTTATGGTGGGGTGTCCAAAACATAAGCACACTTGGTCAAGGGCTTCAAGCTAGCACCTACGTCGGAGAAATTCTTTTTTGCATTTTATTAGCTGTTTTGGGACTTGTCCTTTTTGCTGTTTTGATTAAGAGTATCCAGAACTTTCTTCAATCGATGTCTGTCCGTCTAGAGGAAATGAGGATCAGAAGACGTGACTCAGAGCAATGGATGCACCACCGCTTGCTTCCAGCGGAGCTAAGGGAAAAAGTTAGACGCTATGAAAAATGTAAATGGTTTAACACACGTGGAGTAGATGAAGAGAGCTTGGTTCAGAAACTTCCCAAAGATTTGAGGAGAGACATCAAACGATACCTTTGTTTGAATTTGGTTAGAAGGGTTCCTCTGTTTGCCAACATGGATGAGCGGTTGCTGGATGCGATATGCGAGCGACTGAAGCCATGTCTGCATACAAAGGGGACGTGCATAATAAGGGAAGGGGATCCGGTGAATGAGATGTTGTTCATTGTACGTGGCCAACTTGAGAGCGTGACGACGGACGGCGGAAGAAGTGGATTCTTCAACAGAGGTTTTCTGAAAGAAGGTGACTTCTGTGGAGAAGAGCTGTTAACATGGGCACTGGACCCAAAATCATCGTCGAATTTACCGTCATCTACAAGGACTGTGAAGGCCATGGATGAAATGGAGGCATTCGCTCTGGAGGCAGAGGAGCTCAAGTTTGTTGCTTCCCAGTTCAGGCGCCTTCACAGCAGGCAGGTTCAGCACACCTTCCGTTTCTACTCCCAGCAGTGGCGGACTTGGGCTGCCATCTTCATCCAGGCTGCCTGGAGGCGCCACCAGAGGAGGAAAATTGCATCCATGCACCACATCAACAAGCTTGATGATGATGACGATGATGATCAATCCCATCATGATGATGATGACGACGACGATGATGATACAAAGGCCTTGATTCCATCTTCTTCGTTTTCATCTTCTAGGTTAGATTCGGCTATGTATGCTTCCCGGTTTGCAACTAATTTGCGTGGGCAGAGGCCCCGTTCTTCCAGTTCGGAAGGCATCGGCCTTCCCCCCCAAAAGCCTCGAGAACCCGACTTCAGCCATCTTGATGATGATGATGACCCACGCTAA 2190 0.4525 MRKLRFNLKGLGPLPPTGGSGGIRRNDNASKSFGVGMRRGSNGLRVLGRSLKSGVTWASVFPEDLKVSERKIFDPQDKTLLQWNKFFQVLCIISVSFDPLFFYLPYFNHKSFCLAIDSSLASYAVTLRTIFDAIYILRISFQFRTAFIAPSSRVFGRGELVIDPAEIAKRYLQRYFIVDFLSVLPLPQIVVWRYLHDPARTKVLATKTQLLNIVILQYFPRFLRFLPLASEISKTAGVFSENTLVGAAYYLTWYMLGSHITGSVWYLLAVERNDTCWRNACMEEERCFTHFLYCGGSNKRATGYEEWRKISPKILKDKCSADDDDAPFDYGIFNQAITSNIVASINFFPKLCYCLWWGVQNISTLGQGLQASTYVGEILFCILLAVLGLVLFAVLIKSIQNFLQSMSVRLEEMRIRRRDSEQWMHHRLLPAELREKVRRYEKCKWFNTRGVDEESLVQKLPKDLRRDIKRYLCLNLVRRVPLFANMDERLLDAICERLKPCLHTKGTCIIREGDPVNEMLFIVRGQLESVTTDGGRSGFFNRGFLKEGDFCGEELLTWALDPKSSSNLPSSTRTVKAMDEMEAFALEAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAAIFIQAAWRRHQRRKIASMHHINKLDDDDDDDQSHHDDDDDDDDDTKALIPSSSFSSSRLDSAMYASRFATNLRGQRPRSSSSEGIGLPPQKPREPDFSHLDDDDDPR 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g02608 729 FunFam Cyclic nucleotide-gated ion channel 1 480 598 - -
Arst4g02608 729 MobiDBLite consensus disorder prediction 694 708 - -
Arst4g02608 729 Gene3D - 84 404 - -
Arst4g02608 729 Pfam Cyclic nucleotide-binding domain 505 592 IPR000595 -
Arst4g02608 729 MobiDBLite consensus disorder prediction 645 729 - -
Arst4g02608 729 SUPERFAMILY cAMP-binding domain-like 412 602 IPR018490 -
Arst4g02608 729 MobiDBLite consensus disorder prediction 670 686 - -
Arst4g02608 729 CDD CAP_ED 482 613 IPR000595 -
Arst4g02608 729 MobiDBLite consensus disorder prediction 652 667 - -
Arst4g02608 729 FunFam Cyclic nucleotide-gated ion channel 1 409 473 - -
Arst4g02608 729 Gene3D Helix hairpin bin 405 473 - -
Arst4g02608 729 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 64 719 - -
Arst4g02608 729 SUPERFAMILY Voltage-gated potassium channels 75 404 - -
Arst4g02608 729 Pfam Ion transport protein 83 409 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Arst4g02608 729 MobiDBLite consensus disorder prediction 9 31 - -
Arst4g02608 729 ProSiteProfiles cAMP/cGMP binding motif profile. 482 579 IPR000595 -
Arst4g02608 729 SMART cnmp_10 482 613 IPR000595 -
Arst4g02608 729 Gene3D Jelly Rolls 480 600 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g02608 Arst-Chr4 95081358 95084066 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g02608 21 719 Ion Channels AT1G15990 65.199 0.0 925
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g02608 K05391 - gmx:100810453 1011.52