Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g02563 ATGGAGGACCACATTGAAGCCAATTATGTTTGTGCCATGCTGCTACTAAGTTTTAACAAAGACGAAGAGCATAGAAGAACGGAAGTTGAATTTTTTAAAGTTGTACGTGTTTCTAGAGCAGTCGATAGGTGCAGAGTGGTCTTCAGGGATATGTTCCAAGAGTGGTGCCCTATTGGCGGCGTTATGAGTATTGTCGAAGATAGTTCTAATGTCTTGTGTTTGCATTGCCTTGCTGATTACGAGGATGTGCCCAAGGTCGGCATGTATTTTGGAACCACTGAAGATGCAAATCAATTTTATCAGAATTATGCCAAGCGCGTTGGTTTTGTTACTAAGATAAGGTTTACCCGAAGAGTTGGTAAAGATAAGGTTCCTAAGAATCAAATGATCACTTGCAATAGGGAGGGAAAACGCAAGTCTAGAGTTTCACCAATAGAAAAGACCAACCCTAGAACCAACTACAATTGCCCTGCAAGGATTTCTATTAGGTTGAATAAGGAGGGTCTTTGGATTATATCGAAGGTGTGCTTGGATCATTCACATCCTTGTGATCCAGAGATGGCAAAACTGTTGACACGTAATAGAGAGATGACTATGCACATGTGTCGAGTCATTGAGAGGAATGATGAAGCAGGTGTGAGACCAAGCAAAACATATCAAGTATTGGTGGGTGAAGCAGGAGGTTTTTCTAAGATAAACTTAATGGAAAAAGATGTTAGGAACTATCTTAGCAGAAAGGTACGCAATGTTACGGAAGAAATGGATGCTAGGGAGATGTTGAAGTATTTTACACGGATGAAGGAAATGAACTCTGATTTTTATTTTGATATTGAACTTGATCAAAACAAGCGTCTCAAAACTATATTTTGGGCTGATGCTCGAAGTAGAGCAGCATATGAGTACTTCGGTGATATAGTTTCGTTTGATACTACTTATAAAACCAATCGTTACGATATGCCATTTGGTTCCTTTGTGGGGGTTAATCACCATGGTAACTCAGTGCTTCTTGGGTGTGGTTTGTTGACTAAGGAAAATTCAGGCTCGTTTACTTGGTTATTTAATGCTTGGCTTACATGTATGCATGGAAAGGCTCCTAAAGGCATTATAACAGACCAATGCCTCGGAATACGAGCTGGAATTGAGAATGTGATGCCAGAGACACGTCATAGGTTATGCATTTGGTACATTACGAAAAAGATTCCAGAAAAATTCAAAAGACACAAGAGATATGAAGAGTTACAAAGTGATTTAAATAATATTGTTTGGGAGTCTATTTCAGAAGATGATTTTCAAAATCAATGGGAAGATTTTCTGATTGAATATGGTTTAGAAGATAACAAGTGGCTATCAGATATCTATGAAGAAAGACATCGATGGGTTCCAATTTTTCTTGACAACTTTTTTTGGGCTGGTATGAGATCCACACAACGAAGTGAGAGCATGCATTCATATTTTGACAAATTTATAAATAACAAGAGCTTGTTGATTCAATTTGTCAAACAATATGACAATTGCCTTGGATGGAAAGAGCAACAAGAAAGGGAGGCTGATGTTGAAGACTATAAATCAATAATACCTTGTGCCACTAATTCCTTAATAGAGAAGCAATTTCAAGGTGCCTATACTAATGCAAAGTTTAAGGAAGTACAAAAGCAATTTAGAAAGAAAGCAAATTGTATTTTGCACCTTATGAAAGCAGTTTCTACATCTAAAGTCTATTCTATTTTGGAGGATGTATCTACTTCTAAAGAGAGGGTTTATGAAGTTAACTACAATGCGGAAACGAAGGATATTACATGCATGTGTCAAATGTTTGAATCAAGAGGCATATTATGCCGTCATAGCTTGGTTGTCCTAGGGCATGAACGCGTGAGAGAAATTCCAAGAAGATACATTTTGGACCGTTGGAGCAAACTTGTGAAGCGAAGACATAGTGATATTAAGAGCAGCCATGATCCAAGTTTGTTGAATCCAAAAACAGAGAGGTTTGATGATTTATGCTCCCATTCGAACAGTGTTGCTCAATTTGCATCCCAAACAAAGGAAACAAGTGATATCTTACATCGTTATCTTGATATGGCTATGGCGGAGTGTCAAAAGCATGTTGCTAACTCATCATCTAATGCCAATGAGTTAGATAATTTGCTTACATCAGAAGATGGTGGTAAAGATGCACTGTCCATTTTTATAGGAGGTTGTATAATAAGCATTCAAGATATTAAAAGCCCTCCTTATGTGTTCACTAAGGGTCGTCCAACAAATAGGTTAGGATTTGAAAAAGACAAGATGATAAAAAAGAAGACCAAGGCAAAGAAGAGGAAAAATGAGATAACCGAAAAAGAGGATAATCAACACATTGGAGATATTCAAAGTCTCCCTTTCAACGAACAGGTTCATCCAATACTTCAAGATGCTAACTACAATGTTAATGAGGGATTTAAATCTGATTCAATGGGAGCATCAATGGGAGGATTCATGTCCTTATTGAACTCAATCCATTCATACCAATTCTCAAATGTCGATTGA 2526 0.3753 MEDHIEANYVCAMLLLSFNKDEEHRRTEVEFFKVVRVSRAVDRCRVVFRDMFQEWCPIGGVMSIVEDSSNVLCLHCLADYEDVPKVGMYFGTTEDANQFYQNYAKRVGFVTKIRFTRRVGKDKVPKNQMITCNREGKRKSRVSPIEKTNPRTNYNCPARISIRLNKEGLWIISKVCLDHSHPCDPEMAKLLTRNREMTMHMCRVIERNDEAGVRPSKTYQVLVGEAGGFSKINLMEKDVRNYLSRKVRNVTEEMDAREMLKYFTRMKEMNSDFYFDIELDQNKRLKTIFWADARSRAAYEYFGDIVSFDTTYKTNRYDMPFGSFVGVNHHGNSVLLGCGLLTKENSGSFTWLFNAWLTCMHGKAPKGIITDQCLGIRAGIENVMPETRHRLCIWYITKKIPEKFKRHKRYEELQSDLNNIVWESISEDDFQNQWEDFLIEYGLEDNKWLSDIYEERHRWVPIFLDNFFWAGMRSTQRSESMHSYFDKFINNKSLLIQFVKQYDNCLGWKEQQEREADVEDYKSIIPCATNSLIEKQFQGAYTNAKFKEVQKQFRKKANCILHLMKAVSTSKVYSILEDVSTSKERVYEVNYNAETKDITCMCQMFESRGILCRHSLVVLGHERVREIPRRYILDRWSKLVKRRHSDIKSSHDPSLLNPKTERFDDLCSHSNSVAQFASQTKETSDILHRYLDMAMAECQKHVANSSSNANELDNLLTSEDGGKDALSIFIGGCIISIQDIKSPPYVFTKGRPTNRLGFEKDKMIKKKTKAKKRKNEITEKEDNQHIGDIQSLPFNEQVHPILQDANYNVNEGFKSDSMGASMGGFMSLLNSIHSYQFSNVD 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g02563 841 SMART 26again6 598 625 IPR006564 GO:0008270
Arst4g02563 841 ProSiteProfiles Zinc finger SWIM-type profile. 587 623 IPR007527 GO:0008270
Arst4g02563 841 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 81 699 IPR031052 GO:0006355
Arst4g02563 841 MobiDBLite consensus disorder prediction 769 789 - -
Arst4g02563 841 Pfam FAR1 DNA-binding domain 98 184 IPR004330 -
Arst4g02563 841 Pfam SWIM zinc finger 587 620 IPR007527 GO:0008270
Arst4g02563 841 Pfam MULE transposase domain 305 399 IPR018289 -
Arst4g02563 841 Coils Coil 760 780 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g02563 Arst-Chr4 93315550 93320002 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst4g02563 MULE 2e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g02563 - - ahf:112717726 1512.66