Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g02561 ATGGAAAGTCATCATCTCCATCATCATCATCATCAACAACAATACCCACCGCCACAACGTCATAATATTAGTGCAGCAACAACAACGAGTGCAGGAACTAATAACAACGTTGTGGTTGTTGATGTGACAGGAGATAGTAGGTTCCCTCAATGGAGCATCCAAGAAACAAAGGAGTTCCTAATGATCCGTGCAGAGCTGGATCAGACTTTCATGGAGACAAAGAGGAACAAGCAGCTCTGGGAAGTCATCTCCAACACCATGAAAGAAAAGGGTTACCATCGAAGCGCTGAGCAGTGCAAGTGCAAGTGGAAAAACCTTGTTACCCGTTATAAGGGATGTGAAACGATGGAGGCAGAAGCAATGAGGCAGCAATTCCCATTCTACAACGAGCTTCAAGCTATCTTCACCGATAGAATGCAGAGGATGCTTTGGGCCGAAACAGAAGGCGGAGGCGGAGGAGGAGGTTCTTCTAATAACAAGAAGAAAGCTGCGACAGCGCAGCTGTCTTCGGACGACGAAGAAGAGGAAGAGAGCGAATTAGGAGATCCTCAACAAAAGAATGTAAAGAGAAAGAAAAGATTAAAGAAGGTTAAGAGGGTGGAAGATAGTGGTGGTGCGAGTAATTTGAAGCATCTGAAGGGGATTCTGGAGGAGTTTATGAGGCAACAGATGGAGATGGAGGCGCAATGGATGTCGGTGTTTGAGGCGAGGGAGAATGATCGGAGGTTGAAGGAGTTGGAATGGAGGCAGACAATGGAGGCTTTGGAGAATCAGAGGATGATGATGGAGCAGAGATGGAGGGAGAGTGAAGAACAATGGAGGATTAGGGAAGAAGCTAGGGCTCATAAGAGAGATGCTCTTATCACTGCACTTCTCAACAAGCTTTCAAGACAACAAGATCAATAA 906 0.4603 MESHHLHHHHHQQQYPPPQRHNISAATTTSAGTNNNVVVVDVTGDSRFPQWSIQETKEFLMIRAELDQTFMETKRNKQLWEVISNTMKEKGYHRSAEQCKCKWKNLVTRYKGCETMEAEAMRQQFPFYNELQAIFTDRMQRMLWAETEGGGGGGGSSNNKKKAATAQLSSDDEEEEESELGDPQQKNVKRKKRLKKVKRVEDSGGASNLKHLKGILEEFMRQQMEMEAQWMSVFEARENDRRLKELEWRQTMEALENQRMMMEQRWRESEEQWRIREEARAHKRDALITALLNKLSRQQDQ 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g02561 301 Coils Coil 245 272 - -
Arst4g02561 301 MobiDBLite consensus disorder prediction 1 15 - -
Arst4g02561 301 MobiDBLite consensus disorder prediction 146 203 - -
Arst4g02561 301 ProSiteProfiles Myb-like domain profile. 51 107 IPR001005 -
Arst4g02561 301 PANTHER FI21293P1 12 298 - -
Arst4g02561 301 FunFam Zinc finger and SCAN domain-containing 20 51 112 - -
Arst4g02561 301 Pfam Myb/SANT-like DNA-binding domain 50 134 IPR044822 -
Arst4g02561 301 CDD GT1 49 114 - -
Arst4g02561 301 MobiDBLite consensus disorder prediction 16 30 - -
Arst4g02561 301 MobiDBLite consensus disorder prediction 1 30 - -
Arst4g02561 301 Gene3D - 51 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g02561 Arst-Chr4 93231982 93233646 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g02561 7 297 Trihelix Transcription Factor Family AT2G38250 52.577 1.09e-70 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Arst4g02561 Myb_DNA-bind_4 5.1e-20 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g02561 4 93231982 93233646 Arst4g02561 4 93231982 93233646 ECH